RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 PSG8Q9UQ74 426 aa12.14□□□□□ -0.47
SDCBP-201ENST00000260130 X6R8D5 127 aa12.14□□□□□ -0.47
SDCBP-201ENST00000260130 SPINK13Q1W4C9 94 aa12.13□□□□□ -0.47
SDCBP-201ENST00000260130 MIFP14174 115 aa12.13□□□□□ -0.47
SDCBP-201ENST00000260130 IL17DQ8TAD2 202 aa12.13□□□□□ -0.47
SDCBP-201ENST00000260130 Q8NAQ8 132 aa12.12□□□□□ -0.47
SDCBP-201ENST00000260130 C11orf68Q9H3H3 251 aaKnown RBP12.12□□□□□ -0.47
SDCBP-201ENST00000260130 COX11Q9Y6N1 276 aa12.12□□□□□ -0.47
SDCBP-201ENST00000260130 LINC00173Q6ZV60 143 aa12.12□□□□□ -0.47
SDCBP-201ENST00000260130 IGHV3OR16-12A0A075B7B8 117 aa12.11□□□□□ -0.47
SDCBP-201ENST00000260130 DEFB4AO15263 64 aa12.11□□□□□ -0.47
SDCBP-201ENST00000260130 ARMS2P0C7Q2 107 aa12.11□□□□□ -0.47
SDCBP-201ENST00000260130 C1orf158Q8N1D5 194 aa12.11□□□□□ -0.47
SDCBP-201ENST00000260130 IGHV4-28A0A0C4DH34 117 aa12.11□□□□□ -0.47
SDCBP-201ENST00000260130 SERTM2A0A1B0GWG4 89 aa12.11□□□□□ -0.47
SDCBP-201ENST00000260130 CT45A10P0DMU9 189 aa12.11□□□□□ -0.47
SDCBP-201ENST00000260130 CDKN1BP46527 198 aa12.1□□□□□ -0.47
SDCBP-201ENST00000260130 PTTG1IPP53801 180 aa12.1□□□□□ -0.47
SDCBP-201ENST00000260130 SLC25A34Q6PIV7 304 aa12.1□□□□□ -0.47
SDCBP-201ENST00000260130 AP5S1Q9NUS5 200 aa12.1□□□□□ -0.47
SDCBP-201ENST00000260130 TRAV12-2A0A075B6T6 113 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 SMIM9A6NGZ8 99 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 INSP01308 110 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 RBMY1A1P0DJD3 496 aaKnown RBP12.09□□□□□ -0.47
SDCBP-201ENST00000260130 RBMY1CP0DJD4 496 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 CSN1S1P47710 185 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 RBMY1FQ15415 496 aaKnown RBP12.09□□□□□ -0.47
SDCBP-201ENST00000260130 LINC00477Q96M19 166 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 hDV102S1A0JD36 115 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 ZNF138P52744 262 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 ERCC8Q13216 396 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 CASC10Q5T4H9 136 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 CBY1Q9Y3M2 126 aa12.09□□□□□ -0.47
SDCBP-201ENST00000260130 ZFAND6Q6FIF0 208 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 FA2HQ7L5A8 372 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 ODF3Q96PU9 254 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 AGPAT4-IT1Q9H0P7 198 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 CSMD3Q7Z407 3707 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 IGKV2-40A0A087WW87 121 aaPredicted RBP12.08□□□□□ -0.48
SDCBP-201ENST00000260130 IGKV2D-40P01614 121 aaPredicted RBP12.08□□□□□ -0.48
SDCBP-201ENST00000260130 UBE2V1Q13404 147 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 LINC01545Q5VT33 79 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 ZNF493Q6ZR52 646 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 C9orf47Q6ZRZ4 202 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 OR10AG1Q8NH19 301 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 PRSS3P2Q8NHM4 247 aa12.08□□□□□ -0.48
SDCBP-201ENST00000260130 CRIP1P50238 77 aa12.07□□□□□ -0.48
SDCBP-201ENST00000260130 ARL6IP6Q8N6S5 226 aa12.07□□□□□ -0.48
SDCBP-201ENST00000260130 SCRT2Q9NQ03 307 aa12.07□□□□□ -0.48
SDCBP-201ENST00000260130 LEPP41159 167 aa12.06□□□□□ -0.48
SDCBP-201ENST00000260130 C11orf45Q8TAV5 145 aa12.06□□□□□ -0.48
SDCBP-201ENST00000260130 VGLL1Q99990 258 aa12.06□□□□□ -0.48
SDCBP-201ENST00000260130 FBLL1A6NHQ2 334 aaKnown RBP12.06□□□□□ -0.48
SDCBP-201ENST00000260130 CCL25O15444 150 aa12.06□□□□□ -0.48
SDCBP-201ENST00000260130 KIR3DS1Q14943 382 aa12.06□□□□□ -0.48
SDCBP-201ENST00000260130 TMEM78Q5T7P6 136 aa12.06□□□□□ -0.48
SDCBP-201ENST00000260130 TPPP3Q9BW30 176 aa12.06□□□□□ -0.48
SDCBP-201ENST00000260130 STARD9Q9P2P6 4700 aa12.06□□□□□ -0.48
SDCBP-201ENST00000260130 TMEM189A5PLL7 270 aa12.05□□□□□ -0.48
SDCBP-201ENST00000260130 RBAKDNA6NC62 111 aa12.05□□□□□ -0.48
SDCBP-201ENST00000260130 MPV17L2Q567V2 206 aa12.05□□□□□ -0.48
SDCBP-201ENST00000260130 C8orf49Q96NF6 230 aa12.05□□□□□ -0.48
SDCBP-201ENST00000260130 H0Y8G0 127 aa12.05□□□□□ -0.48
SDCBP-201ENST00000260130 RRN3P1Q2M238 152 aa12.05□□□□□ -0.48
SDCBP-201ENST00000260130 SAPCD1Q5SSQ6 148 aa12.05□□□□□ -0.48
SDCBP-201ENST00000260130 FAM19A4Q96LR4 140 aa12.05□□□□□ -0.48
SDCBP-201ENST00000260130 LINC01587Q99440 93 aa12.05□□□□□ -0.48
SDCBP-201ENST00000260130 PMCHL2Q9BQD1 86 aa12.05□□□□□ -0.48
SDCBP-201ENST00000260130 J3KRW8 73 aa12.04□□□□□ -0.48
SDCBP-201ENST00000260130 TIMM8BQ9Y5J9 83 aaPredicted RBP12.04□□□□□ -0.48
SDCBP-201ENST00000260130 NUDT3O95989 172 aa12.03□□□□□ -0.48
SDCBP-201ENST00000260130 LYZL1Q6UWQ5 148 aa12.03□□□□□ -0.48
SDCBP-201ENST00000260130 COX8CQ7Z4L0 72 aa12.03□□□□□ -0.48
SDCBP-201ENST00000260130 SH2D1AO60880 128 aa12.03□□□□□ -0.48
SDCBP-201ENST00000260130 NANOS2P60321 138 aaKnown RBP12.03□□□□□ -0.48
SDCBP-201ENST00000260130 RPS20P60866 119 aaKnown RBP12.03□□□□□ -0.48
SDCBP-201ENST00000260130 BVES-AS1Q5T3Y7 98 aa12.03□□□□□ -0.48
SDCBP-201ENST00000260130 Q6ZVH6 145 aa12.03□□□□□ -0.48
SDCBP-201ENST00000260130 PRM2P04554 102 aa12.02□□□□□ -0.48
SDCBP-201ENST00000260130 EMP1P54849 157 aa12.02□□□□□ -0.48
SDCBP-201ENST00000260130 FAM104BQ5XKR9 115 aa12.02□□□□□ -0.48
SDCBP-201ENST00000260130 KLLNB2CW77 178 aa12.02□□□□□ -0.49
SDCBP-201ENST00000260130 D6R8Y8 96 aa12.02□□□□□ -0.49
SDCBP-201ENST00000260130 ORMDL3Q8N138 153 aa12.02□□□□□ -0.49
SDCBP-201ENST00000260130 PRELID3AQ96N28 172 aa12.02□□□□□ -0.49
SDCBP-201ENST00000260130 TRAV12-3A0A0B4J271 114 aa12.01□□□□□ -0.49
SDCBP-201ENST00000260130 TRBV7-9A0A0J9YWB2 115 aa12.01□□□□□ -0.49
SDCBP-201ENST00000260130 IFI27P40305 119 aaPredicted RBP12.01□□□□□ -0.49
SDCBP-201ENST00000260130 TP73-AS1Q9UF72 201 aa12.01□□□□□ -0.49
SDCBP-201ENST00000260130 COX8AP10176 69 aa12.01□□□□□ -0.49
SDCBP-201ENST00000260130 Q8TAT8 98 aa12.01□□□□□ -0.49
SDCBP-201ENST00000260130 CELA1Q9UNI1 258 aa12.01□□□□□ -0.49
SDCBP-201ENST00000260130 TMSB15BA0A087X1C1 80 aa12□□□□□ -0.49
SDCBP-201ENST00000260130 C7orf71A4D174 169 aa12□□□□□ -0.49
SDCBP-201ENST00000260130 HTN1P15515 57 aa12□□□□□ -0.49
SDCBP-201ENST00000260130 VAMP3Q15836 100 aa12□□□□□ -0.49
SDCBP-201ENST00000260130 ZFAND2AQ8N6M9 145 aa12□□□□□ -0.49
SDCBP-201ENST00000260130 OR4C5Q8NGB2 326 aa12□□□□□ -0.49
SDCBP-201ENST00000260130 AZU1P20160 251 aa11.99□□□□□ -0.49
SDCBP-201ENST00000260130 RNASE4P34096 147 aaKnown RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms