RNA–Protein interactions for RNA: ENST00000254066.9

RARA-201, Transcript of retinoic acid receptor alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARA, Length 2,414 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-201ENST00000254066 SPANXCQ9NY87 97 aa15.51■□□□□ 0.07
RARA-201ENST00000254066 DUSP14O95147 198 aaKnown RBP15.5■□□□□ 0.07
RARA-201ENST00000254066 TSHBP01222 138 aa15.5■□□□□ 0.07
RARA-201ENST00000254066 DEFB109BQ30KR1 87 aa15.5■□□□□ 0.07
RARA-201ENST00000254066 SPANXDQ9BXN6 97 aa15.5■□□□□ 0.07
RARA-201ENST00000254066 TRBV30A0A0K0K1B3 111 aa15.49■□□□□ 0.07
RARA-201ENST00000254066 H3BMM0 161 aa15.49■□□□□ 0.07
RARA-201ENST00000254066 IGHV3-23P01764 117 aa15.49■□□□□ 0.07
RARA-201ENST00000254066 LGALS3P17931 250 aaKnown RBP15.49■□□□□ 0.07
RARA-201ENST00000254066 TSPEAR-AS2P59090 65 aa15.49■□□□□ 0.07
RARA-201ENST00000254066 FAM57AQ8TBR7 257 aa15.49■□□□□ 0.07
RARA-201ENST00000254066 UBE2WQ96B02 151 aa15.49■□□□□ 0.07
RARA-201ENST00000254066 LINC00694P0DN24 101 aa15.49■□□□□ 0.07
RARA-201ENST00000254066 BSPH1Q075Z2 132 aa15.49■□□□□ 0.07
RARA-201ENST00000254066 DYNLRB1Q9NP97 96 aa15.49■□□□□ 0.07
RARA-201ENST00000254066 TRAV2A0A0B4J234 112 aa15.48■□□□□ 0.07
RARA-201ENST00000254066 PRB3Q04118 309 aaPredicted RBP15.48■□□□□ 0.07
RARA-201ENST00000254066 PLCE1Q9P212 2302 aa15.48■□□□□ 0.07
RARA-201ENST00000254066 ICE1Q9Y2F5 2266 aa15.48■□□□□ 0.07
RARA-201ENST00000254066 KLK9Q2XQG4 91 aa15.48■□□□□ 0.07
RARA-201ENST00000254066 GPHB5Q86YW7 130 aa15.48■□□□□ 0.07
RARA-201ENST00000254066 KLK9Q9UKQ9 250 aa15.48■□□□□ 0.07
RARA-201ENST00000254066 SMG1Q96Q15 3661 aaKnown RBP15.48■□□□□ 0.07
RARA-201ENST00000254066 Q6ZQT7 251 aa15.47■□□□□ 0.07
RARA-201ENST00000254066 IGHV4OR15-8A0A075B7B6 117 aa15.47■□□□□ 0.07
RARA-201ENST00000254066 A0A087WW49 117 aa15.47■□□□□ 0.07
RARA-201ENST00000254066 RPS28P62857 69 aaKnown RBP15.47■□□□□ 0.07
RARA-201ENST00000254066 ZNF876PQ49A33 203 aa15.47■□□□□ 0.07
RARA-201ENST00000254066 ATMQ13315 3056 aa15.47■□□□□ 0.07
RARA-201ENST00000254066 H3BT86 120 aa15.46■□□□□ 0.07
RARA-201ENST00000254066 LEPROTO15243 131 aa15.46■□□□□ 0.07
RARA-201ENST00000254066 TMEM170BQ5T4T1 132 aa15.46■□□□□ 0.07
RARA-201ENST00000254066 TP53TG1Q9Y2A0 90 aa15.46■□□□□ 0.07
RARA-201ENST00000254066 KALRNO60229 2985 aa15.46■□□□□ 0.07
RARA-201ENST00000254066 A0A0J9YX75 114 aa15.46■□□□□ 0.07
RARA-201ENST00000254066 C14orf178Q8N769 122 aaPredicted RBP15.46■□□□□ 0.07
RARA-201ENST00000254066 LINC01587Q99440 93 aa15.46■□□□□ 0.07
RARA-201ENST00000254066 TRAV21A0A0B4J279 112 aa15.45■□□□□ 0.06
RARA-201ENST00000254066 TEX49A0A1B0GTD5 131 aa15.45■□□□□ 0.06
RARA-201ENST00000254066 EIF4EBP3O60516 100 aaPredicted RBP15.45■□□□□ 0.06
RARA-201ENST00000254066 NDPQ00604 133 aa15.45■□□□□ 0.06
RARA-201ENST00000254066 PHLDA3Q9Y5J5 127 aa15.45■□□□□ 0.06
RARA-201ENST00000254066 DEFB121Q5J5C9 76 aa15.45■□□□□ 0.06
RARA-201ENST00000254066 LY6G5BQ8NDX9 201 aa15.45■□□□□ 0.06
RARA-201ENST00000254066 TRBV7-7A0A0K0K1E9 115 aa15.44■□□□□ 0.06
RARA-201ENST00000254066 S100A4P26447 101 aaKnown RBP15.44■□□□□ 0.06
RARA-201ENST00000254066 HES1Q14469 280 aa15.44■□□□□ 0.06
RARA-201ENST00000254066 TMEM101Q96IK0 257 aa15.44■□□□□ 0.06
RARA-201ENST00000254066 LINC00477Q96M19 166 aa15.44■□□□□ 0.06
RARA-201ENST00000254066 MGPP08493 103 aa15.44■□□□□ 0.06
RARA-201ENST00000254066 ZNF462Q96JM2 2506 aa15.44■□□□□ 0.06
RARA-201ENST00000254066 CLPSL1A2RUU4 121 aa15.43■□□□□ 0.06
RARA-201ENST00000254066 SDHAF1A6NFY7 115 aa15.43■□□□□ 0.06
RARA-201ENST00000254066 POLR2KP53803 58 aaKnown RBP15.43■□□□□ 0.06
RARA-201ENST00000254066 ZNRF2Q8NHG8 242 aa15.43■□□□□ 0.06
RARA-201ENST00000254066 LOC107984640A0A0U1RRK4 108 aa15.42■□□□□ 0.06
RARA-201ENST00000254066 VCYO14598 125 aa15.42■□□□□ 0.06
RARA-201ENST00000254066 KLRB1Q12918 225 aa15.42■□□□□ 0.06
RARA-201ENST00000254066 CFAP46Q8IYW2 2715 aa15.42■□□□□ 0.06
RARA-201ENST00000254066 ZGRF1Q86YA3 2104 aa15.42■□□□□ 0.06
RARA-201ENST00000254066 M0R2P5 195 aa15.42■□□□□ 0.06
RARA-201ENST00000254066 Q1RN00 199 aa15.42■□□□□ 0.06
RARA-201ENST00000254066 MUSTN1Q8IVN3 82 aa15.42■□□□□ 0.06
RARA-201ENST00000254066 IMUPQ9GZP8 106 aa15.42■□□□□ 0.06
RARA-201ENST00000254066 IGHV3OR16-8A0A075B7F1 116 aa15.41■□□□□ 0.06
RARA-201ENST00000254066 NXPH4O95158 308 aa15.41■□□□□ 0.06
RARA-201ENST00000254066 PRR9Q5T870 116 aa15.41■□□□□ 0.06
RARA-201ENST00000254066 Q8N6K4 173 aa15.41■□□□□ 0.06
RARA-201ENST00000254066 PIEZO2Q9H5I5 2752 aa15.41■□□□□ 0.06
RARA-201ENST00000254066 EMP1P54849 157 aa15.41■□□□□ 0.06
RARA-201ENST00000254066 C2orf82Q6UX34 121 aa15.41■□□□□ 0.06
RARA-201ENST00000254066 C9orf139Q6ZV77 190 aa15.41■□□□□ 0.06
RARA-201ENST00000254066 FAM110DQ8TAY7 271 aaPredicted RBP15.41■□□□□ 0.06
RARA-201ENST00000254066 U3KQE9 123 aa15.41■□□□□ 0.06
RARA-201ENST00000254066 TMEM223A0PJW6 202 aa15.4■□□□□ 0.06
RARA-201ENST00000254066 ODF3BA8MYP8 253 aa15.4■□□□□ 0.06
RARA-201ENST00000254066 EBI3Q14213 229 aa15.4■□□□□ 0.06
RARA-201ENST00000254066 METTL26Q96S19 204 aa15.4■□□□□ 0.06
RARA-201ENST00000254066 IGHV1-69P01742 117 aa15.39■□□□□ 0.05
RARA-201ENST00000254066 OOSP1A8MZH6 123 aa15.39■□□□□ 0.05
RARA-201ENST00000254066 NPFFO15130 113 aa15.39■□□□□ 0.05
RARA-201ENST00000254066 ZFAND2AQ8N6M9 145 aa15.39■□□□□ 0.05
RARA-201ENST00000254066 GCN1Q92616 2671 aaKnown RBP15.39■□□□□ 0.05
RARA-201ENST00000254066 IGHV3-35A0A0C4DH35 117 aa15.38■□□□□ 0.05
RARA-201ENST00000254066 IGHV4-39P01824 125 aa15.38■□□□□ 0.05
RARA-201ENST00000254066 C15orf32Q32M92 178 aa15.38■□□□□ 0.05
RARA-201ENST00000254066 HELZ2Q9BYK8 2649 aaKnown RBP15.38■□□□□ 0.05
RARA-201ENST00000254066 ELANEP08246 267 aa15.38■□□□□ 0.05
RARA-201ENST00000254066 SEC61GP60059 68 aa15.38■□□□□ 0.05
RARA-201ENST00000254066 IGFL3Q6UXB1 125 aa15.38■□□□□ 0.05
RARA-201ENST00000254066 KIF25-AS1Q9Y6Z4 181 aa15.38■□□□□ 0.05
RARA-201ENST00000254066 TRIAP1O43715 76 aa15.37■□□□□ 0.05
RARA-201ENST00000254066 ITLN2Q8WWU7 325 aaPredicted RBP15.37■□□□□ 0.05
RARA-201ENST00000254066 DUX3Q96PT4 197 aa15.37■□□□□ 0.05
RARA-201ENST00000254066 H7C2G1 150 aa15.37■□□□□ 0.05
RARA-201ENST00000254066 COX6CP09669 75 aa15.37■□□□□ 0.05
RARA-201ENST00000254066 IGHV7-81A0A0B4J1V7 117 aa15.36■□□□□ 0.05
RARA-201ENST00000254066 E7EQL1 145 aa15.36■□□□□ 0.05
RARA-201ENST00000254066 H7C423 109 aa15.36■□□□□ 0.05
RARA-201ENST00000254066 M0R1W7 72 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms