RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 NOP10Q9NPE3 64 aaKnown RBP9.28□□□□□ -0.92
LSM8-201ENST00000249299 MSRB1Q9NZV6 116 aa9.28□□□□□ -0.92
LSM8-201ENST00000249299 IGHV4-28A0A0C4DH34 117 aa9.27□□□□□ -0.93
LSM8-201ENST00000249299 PRB2P02812 416 aaPredicted RBP9.27□□□□□ -0.93
LSM8-201ENST00000249299 EVI2AP22794 236 aa9.27□□□□□ -0.93
LSM8-201ENST00000249299 SBSPONQ8IVN8 264 aa9.27□□□□□ -0.93
LSM8-201ENST00000249299 MRAPQ8TCY5 172 aa9.27□□□□□ -0.93
LSM8-201ENST00000249299 B9D2Q9BPU9 175 aa9.27□□□□□ -0.93
LSM8-201ENST00000249299 KIF25-AS1Q9Y6Z4 181 aa9.27□□□□□ -0.93
LSM8-201ENST00000249299 TRGV1A0A0A0MS02 117 aa9.26□□□□□ -0.93
LSM8-201ENST00000249299 MUC21A0A0G2JKD1 596 aa9.26□□□□□ -0.93
LSM8-201ENST00000249299 MUC21A0A140T8X8 626 aa9.26□□□□□ -0.93
LSM8-201ENST00000249299 RS1O15537 224 aa9.26□□□□□ -0.93
LSM8-201ENST00000249299 PPP1R17O96001 155 aa9.26□□□□□ -0.93
LSM8-201ENST00000249299 NHLRC4P0CG21 123 aaPredicted RBP9.26□□□□□ -0.93
LSM8-201ENST00000249299 MRAP2Q96G30 205 aa9.26□□□□□ -0.93
LSM8-201ENST00000249299 ZMAT4Q9H898 229 aa9.26□□□□□ -0.93
LSM8-201ENST00000249299 EDA2RQ9HAV5 297 aa9.26□□□□□ -0.93
LSM8-201ENST00000249299 LAMTOR2Q9Y2Q5 125 aa9.26□□□□□ -0.93
LSM8-201ENST00000249299 NBEAL2Q6ZNJ1 2754 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 TRAV4A0A0B4J268 109 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 PHOX2AO14813 284 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 TRGC2P03986 189 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 CRYGDP07320 174 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 SPART-AS1P0CW21 52 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 RAB4AP20338 218 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 FABP9Q0Z7S8 132 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 CFAP126Q5VTH2 177 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 C14orf178Q8N769 122 aaPredicted RBP9.25□□□□□ -0.93
LSM8-201ENST00000249299 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.25□□□□□ -0.93
LSM8-201ENST00000249299 DKK2Q9UBU2 259 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 U3KQK5 164 aa9.25□□□□□ -0.93
LSM8-201ENST00000249299 C1orf196B1AJZ1 125 aa9.24□□□□□ -0.93
LSM8-201ENST00000249299 LINC00315P59091 139 aa9.24□□□□□ -0.93
LSM8-201ENST00000249299 SLAQ13239 276 aa9.24□□□□□ -0.93
LSM8-201ENST00000249299 UFSP1Q6NVU6 142 aa9.24□□□□□ -0.93
LSM8-201ENST00000249299 Q6ZTI0 123 aa9.24□□□□□ -0.93
LSM8-201ENST00000249299 AMN1Q8IY45 258 aa9.24□□□□□ -0.93
LSM8-201ENST00000249299 RNF185Q96GF1 192 aa9.24□□□□□ -0.93
LSM8-201ENST00000249299 TRGV2A0A075B6R0 118 aa9.23□□□□□ -0.93
LSM8-201ENST00000249299 H7C1H1 209 aa9.23□□□□□ -0.93
LSM8-201ENST00000249299 SSTP61278 116 aa9.23□□□□□ -0.93
LSM8-201ENST00000249299 ORMDL3Q8N138 153 aa9.23□□□□□ -0.93
LSM8-201ENST00000249299 OR4C5Q8NGB2 326 aa9.23□□□□□ -0.93
LSM8-201ENST00000249299 MRPL16Q9NX20 251 aaKnown RBP9.23□□□□□ -0.93
LSM8-201ENST00000249299 MUC4Q99102 2169 aa9.22□□□□□ -0.93
LSM8-201ENST00000249299 RAB5BP61020 215 aa9.22□□□□□ -0.93
LSM8-201ENST00000249299 MRPL51Q4U2R6 128 aaKnown RBP9.22□□□□□ -0.93
LSM8-201ENST00000249299 FAM222AQ5U5X8 452 aa9.22□□□□□ -0.93
LSM8-201ENST00000249299 GAGE12BA1L429 117 aa9.21□□□□□ -0.94
LSM8-201ENST00000249299 EIF4EBP3O60516 100 aaPredicted RBP9.21□□□□□ -0.94
LSM8-201ENST00000249299 GAGE7O76087 117 aa9.21□□□□□ -0.94
LSM8-201ENST00000249299 IGHV3-53P01767 116 aa9.21□□□□□ -0.94
LSM8-201ENST00000249299 GAGE12FP0CL80 117 aa9.21□□□□□ -0.94
LSM8-201ENST00000249299 GAGE12GP0CL81 117 aa9.21□□□□□ -0.94
LSM8-201ENST00000249299 GAGE12IP0CL82 117 aa9.21□□□□□ -0.94
LSM8-201ENST00000249299 CKS2P33552 79 aa9.21□□□□□ -0.94
LSM8-201ENST00000249299 EMP1P54849 157 aa9.21□□□□□ -0.94
LSM8-201ENST00000249299 ALKBH7Q9BT30 221 aaPredicted RBP9.21□□□□□ -0.94
LSM8-201ENST00000249299 A0A087WWL8 130 aa9.2□□□□□ -0.94
LSM8-201ENST00000249299 PRSS47A8MTI9 375 aa9.2□□□□□ -0.94
LSM8-201ENST00000249299 DEFA6Q01524 100 aa9.2□□□□□ -0.94
LSM8-201ENST00000249299 OR10J3Q5JRS4 329 aa9.2□□□□□ -0.94
LSM8-201ENST00000249299 SAMD10Q9BYL1 202 aa9.2□□□□□ -0.94
LSM8-201ENST00000249299 KRTAP4-8Q9BYQ9 185 aa9.2□□□□□ -0.94
LSM8-201ENST00000249299 JPT2Q9H910 190 aa9.2□□□□□ -0.94
LSM8-201ENST00000249299 TRBV10-1A0A0K0K1A3 114 aa9.19□□□□□ -0.94
LSM8-201ENST00000249299 TRBV6-5A0A0K0K1A5 114 aa9.19□□□□□ -0.94
LSM8-201ENST00000249299 TRBV6-4A0A1B0GX49 114 aa9.19□□□□□ -0.94
LSM8-201ENST00000249299 DAD1P61803 113 aa9.19□□□□□ -0.94
LSM8-201ENST00000249299 RPL32P62910 135 aaKnown RBP9.19□□□□□ -0.94
LSM8-201ENST00000249299 Q0VG73 95 aa9.19□□□□□ -0.94
LSM8-201ENST00000249299 FAM74A4Q5TZK3 123 aa9.19□□□□□ -0.94
LSM8-201ENST00000249299 PRELID3AQ96N28 172 aa9.19□□□□□ -0.94
LSM8-201ENST00000249299 C20orf78Q9BR46 151 aa9.19□□□□□ -0.94
LSM8-201ENST00000249299 RETNQ9HD89 108 aa9.19□□□□□ -0.94
LSM8-201ENST00000249299 D6R8Y8 96 aa9.18□□□□□ -0.94
LSM8-201ENST00000249299 F5H697 171 aa9.18□□□□□ -0.94
LSM8-201ENST00000249299 M0QY20 66 aa9.18□□□□□ -0.94
LSM8-201ENST00000249299 ATP5G1P05496 136 aa9.18□□□□□ -0.94
LSM8-201ENST00000249299 MGPP08493 103 aa9.18□□□□□ -0.94
LSM8-201ENST00000249299 ZNF56Q15929 161 aa9.18□□□□□ -0.94
LSM8-201ENST00000249299 CDPF1Q6NVV7 123 aa9.18□□□□□ -0.94
LSM8-201ENST00000249299 DNAJC30Q96LL9 226 aa9.18□□□□□ -0.94
LSM8-201ENST00000249299 HIST1H2BKO60814 126 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 HIST1H2BJP06899 126 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 DEFB130BP0DP73 79 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 DEFB130AP0DP74 79 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 GATA1P15976 413 aaPredicted RBP9.17□□□□□ -0.94
LSM8-201ENST00000249299 HIST1H2BOP23527 126 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 SRIP30626 198 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 HIST1H2BBP33778 126 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 HIST1H2BDP58876 126 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 HIST1H2BCP62807 126 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 HIST2H2BEQ16778 126 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 KIAA1644Q3SXP7 199 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 COA6Q5JTJ3 125 aaKnown RBP9.17□□□□□ -0.94
LSM8-201ENST00000249299 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.17□□□□□ -0.94
LSM8-201ENST00000249299 SUMO4Q6EEV6 95 aa9.17□□□□□ -0.94
LSM8-201ENST00000249299 HIST1H2BHQ93079 126 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms