RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 ZNF469Q96JG9 3925 aaPredicted RBP19.04■□□□□ 0.64
RAB40C-201ENST00000248139 TSHBP01222 138 aa19.03■□□□□ 0.64
RAB40C-201ENST00000248139 CRYGDP07320 174 aa19.03■□□□□ 0.64
RAB40C-201ENST00000248139 KLHL30-AS1Q8NEE0 82 aa19.03■□□□□ 0.64
RAB40C-201ENST00000248139 MED14OSP0DP75 135 aa19.03■□□□□ 0.64
RAB40C-201ENST00000248139 CD300EQ496F6 205 aaPredicted RBP19.03■□□□□ 0.64
RAB40C-201ENST00000248139 PRB1P04280 392 aa19.02■□□□□ 0.64
RAB40C-201ENST00000248139 PRADC1Q9BSG0 188 aa19.02■□□□□ 0.64
RAB40C-201ENST00000248139 K7EMT4 169 aa19.02■□□□□ 0.63
RAB40C-201ENST00000248139 K7ERU9 68 aa19.01■□□□□ 0.63
RAB40C-201ENST00000248139 RIPPLY3P57055 190 aa19.01■□□□□ 0.63
RAB40C-201ENST00000248139 ZNF256Q9Y2P7 627 aaPredicted RBP19.01■□□□□ 0.63
RAB40C-201ENST00000248139 MYMXA0A1B0GTQ4 84 aa19.01■□□□□ 0.63
RAB40C-201ENST00000248139 SLC25A16P16260 332 aa19■□□□□ 0.63
RAB40C-201ENST00000248139 C12orf74Q32Q52 190 aa19■□□□□ 0.63
RAB40C-201ENST00000248139 ZFP2Q6ZN57 461 aa19■□□□□ 0.63
RAB40C-201ENST00000248139 Q8N1Y9 231 aa19■□□□□ 0.63
RAB40C-201ENST00000248139 NXPH4O95158 308 aa18.99■□□□□ 0.63
RAB40C-201ENST00000248139 HTN1P15515 57 aa18.99■□□□□ 0.63
RAB40C-201ENST00000248139 PLEKHB2Q96CS7 222 aa18.99■□□□□ 0.63
RAB40C-201ENST00000248139 LGALS1P09382 135 aaKnown RBP18.99■□□□□ 0.63
RAB40C-201ENST00000248139 MTURNQ8N3F0 131 aa18.99■□□□□ 0.63
RAB40C-201ENST00000248139 SDHAF1A6NFY7 115 aa18.98■□□□□ 0.63
RAB40C-201ENST00000248139 AMTNQ6UX39 209 aa18.98■□□□□ 0.63
RAB40C-201ENST00000248139 NAV2Q8IVL1 2488 aa18.98■□□□□ 0.63
RAB40C-201ENST00000248139 IGHV4OR15-8A0A075B7B6 117 aa18.98■□□□□ 0.63
RAB40C-201ENST00000248139 A0A087WW49 117 aa18.98■□□□□ 0.63
RAB40C-201ENST00000248139 C11orf86A6NJI1 115 aa18.98■□□□□ 0.63
RAB40C-201ENST00000248139 IGLL5B9A064 214 aa18.98■□□□□ 0.63
RAB40C-201ENST00000248139 PRM2P04554 102 aa18.98■□□□□ 0.63
RAB40C-201ENST00000248139 TRBV7-9A0A0J9YWB2 115 aa18.97■□□□□ 0.63
RAB40C-201ENST00000248139 A0A0J9YX75 114 aa18.97■□□□□ 0.63
RAB40C-201ENST00000248139 POLR2KP53803 58 aaKnown RBP18.97■□□□□ 0.63
RAB40C-201ENST00000248139 OPRPNQ99935 248 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-201ENST00000248139 TRBV7-3A0A075B6L6 115 aa18.97■□□□□ 0.63
RAB40C-201ENST00000248139 IGHV3-16A0A0C4DH30 117 aa18.97■□□□□ 0.63
RAB40C-201ENST00000248139 DEFB136Q30KP8 78 aa18.97■□□□□ 0.63
RAB40C-201ENST00000248139 C18orf65Q6ZTR6 163 aa18.97■□□□□ 0.63
RAB40C-201ENST00000248139 BEX4Q9NWD9 120 aaPredicted RBP18.97■□□□□ 0.63
RAB40C-201ENST00000248139 ZNF815PA8K554 130 aa18.96■□□□□ 0.63
RAB40C-201ENST00000248139 SCGB2A2Q13296 93 aa18.96■□□□□ 0.63
RAB40C-201ENST00000248139 ZNF56Q15929 161 aa18.96■□□□□ 0.63
RAB40C-201ENST00000248139 POM121L12Q8N7R1 296 aa18.96■□□□□ 0.63
RAB40C-201ENST00000248139 LINC01356Q8N9X3 169 aa18.96■□□□□ 0.63
RAB40C-201ENST00000248139 OR5A1Q8NGJ0 315 aa18.95■□□□□ 0.62
RAB40C-201ENST00000248139 SONP18583 2426 aaKnown RBP18.94■□□□□ 0.62
RAB40C-201ENST00000248139 IGLV4-69A0A075B6H9 119 aa18.94■□□□□ 0.62
RAB40C-201ENST00000248139 IGIPA6NJ69 53 aa18.94■□□□□ 0.62
RAB40C-201ENST00000248139 SNRPD3P62318 126 aaKnown RBP18.94■□□□□ 0.62
RAB40C-201ENST00000248139 RPL24P83731 157 aaKnown RBP18.94■□□□□ 0.62
RAB40C-201ENST00000248139 MORN3Q6PF18 240 aaPredicted RBP18.94■□□□□ 0.62
RAB40C-201ENST00000248139 ZNF479Q96JC4 524 aa18.94■□□□□ 0.62
RAB40C-201ENST00000248139 E9PLD3 99 aa18.94■□□□□ 0.62
RAB40C-201ENST00000248139 K7EQG2 157 aa18.94■□□□□ 0.62
RAB40C-201ENST00000248139 SFTA2Q6UW10 78 aa18.94■□□□□ 0.62
RAB40C-201ENST00000248139 SCGB1D4Q6XE38 83 aa18.93■□□□□ 0.62
RAB40C-201ENST00000248139 USP24Q9UPU5 2620 aa18.93■□□□□ 0.62
RAB40C-201ENST00000248139 H3BMG7 143 aa18.93■□□□□ 0.62
RAB40C-201ENST00000248139 KIR2DL4Q99706 377 aa18.93■□□□□ 0.62
RAB40C-201ENST00000248139 PPP1R17O96001 155 aa18.92■□□□□ 0.62
RAB40C-201ENST00000248139 DUX3Q96PT4 197 aa18.92■□□□□ 0.62
RAB40C-201ENST00000248139 VCYO14598 125 aa18.92■□□□□ 0.62
RAB40C-201ENST00000248139 HOXD3P31249 432 aaPredicted RBP18.92■□□□□ 0.62
RAB40C-201ENST00000248139 IGHV3-73A0A0B4J1V6 119 aa18.91■□□□□ 0.62
RAB40C-201ENST00000248139 C9orf85Q96MD7 179 aa18.91■□□□□ 0.62
RAB40C-201ENST00000248139 NF1P21359 2839 aa18.91■□□□□ 0.62
RAB40C-201ENST00000248139 EPG5Q9HCE0 2579 aa18.9■□□□□ 0.62
RAB40C-201ENST00000248139 A0A096LNT2 108 aa18.9■□□□□ 0.62
RAB40C-201ENST00000248139 KNCNA6PVL3 124 aa18.9■□□□□ 0.62
RAB40C-201ENST00000248139 G3V4G9 280 aa18.9■□□□□ 0.62
RAB40C-201ENST00000248139 WFDC2Q14508 124 aa18.9■□□□□ 0.62
RAB40C-201ENST00000248139 IGHV1OR15-1A0A075B7D0 117 aa18.89■□□□□ 0.62
RAB40C-201ENST00000248139 ZNF876PQ49A33 203 aa18.89■□□□□ 0.62
RAB40C-201ENST00000248139 TEX48A0A1B0GUV7 120 aa18.89■□□□□ 0.61
RAB40C-201ENST00000248139 RBMY1A1P0DJD3 496 aaKnown RBP18.89■□□□□ 0.61
RAB40C-201ENST00000248139 RBMY1CP0DJD4 496 aa18.89■□□□□ 0.61
RAB40C-201ENST00000248139 RBMY1FQ15415 496 aaKnown RBP18.89■□□□□ 0.61
RAB40C-201ENST00000248139 TAL2Q16559 108 aa18.89■□□□□ 0.61
RAB40C-201ENST00000248139 TMEM170BQ5T4T1 132 aa18.89■□□□□ 0.61
RAB40C-201ENST00000248139 ZNRF2Q8NHG8 242 aa18.89■□□□□ 0.61
RAB40C-201ENST00000248139 ZNF580Q9UK33 172 aa18.89■□□□□ 0.61
RAB40C-201ENST00000248139 NBPF19A0A087WUL8 3843 aa18.88■□□□□ 0.61
RAB40C-201ENST00000248139 GATA3P23771 443 aa18.88■□□□□ 0.61
RAB40C-201ENST00000248139 SLURP1P55000 103 aa18.88■□□□□ 0.61
RAB40C-201ENST00000248139 M0QY20 66 aa18.88■□□□□ 0.61
RAB40C-201ENST00000248139 HOXA3O43365 443 aaPredicted RBP18.88■□□□□ 0.61
RAB40C-201ENST00000248139 COX6B1P14854 86 aa18.88■□□□□ 0.61
RAB40C-201ENST00000248139 TSPEAR-AS2P59090 65 aa18.88■□□□□ 0.61
RAB40C-201ENST00000248139 KRTAP10-9P60411 292 aa18.88■□□□□ 0.61
RAB40C-201ENST00000248139 CHD6Q8TD26 2715 aa18.88■□□□□ 0.61
RAB40C-201ENST00000248139 SETD2Q9BYW2 2564 aaPredicted RBP18.88■□□□□ 0.61
RAB40C-201ENST00000248139 PMVKQ15126 192 aa18.87■□□□□ 0.61
RAB40C-201ENST00000248139 FOXI2Q6ZQN5 318 aa18.87■□□□□ 0.61
RAB40C-201ENST00000248139 LGALS9O00182 355 aa18.87■□□□□ 0.61
RAB40C-201ENST00000248139 SRSF9Q13242 221 aaKnown RBP eCLIP18.87■□□□□ 0.61
RAB40C-201ENST00000248139 WNK1Q9H4A3 2382 aa18.87■□□□□ 0.61
RAB40C-201ENST00000248139 P0DMU3 169 aa18.87■□□□□ 0.61
RAB40C-201ENST00000248139 FAM231AP0DMU4 169 aa18.87■□□□□ 0.61
RAB40C-201ENST00000248139 FAM231CP0DMU5 169 aa18.87■□□□□ 0.61
RAB40C-201ENST00000248139 PROK1P58294 105 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 105.1 ms