RNA–Protein interactions for RNA: ENST00000233575.6

SNX17-201, Transcript of sorting nexin 17, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX17, Length 2,044 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-201ENST00000233575 DPH3P1Q9H4G8 78 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 MRPL16Q9NX20 251 aaKnown RBP13.4□□□□□ -0.26
SNX17-201ENST00000233575 U3KQK5 164 aa13.4□□□□□ -0.26
SNX17-201ENST00000233575 PLAC8L1A1L4L8 177 aa13.39□□□□□ -0.27
SNX17-201ENST00000233575 M0R2P5 195 aa13.39□□□□□ -0.27
SNX17-201ENST00000233575 APOC4P55056 127 aa13.39□□□□□ -0.27
SNX17-201ENST00000233575 LINC00315P59091 139 aa13.39□□□□□ -0.27
SNX17-201ENST00000233575 Q0VG73 95 aa13.39□□□□□ -0.27
SNX17-201ENST00000233575 NBEAL1Q6ZS30 2694 aa13.39□□□□□ -0.27
SNX17-201ENST00000233575 CKS2P33552 79 aa13.39□□□□□ -0.27
SNX17-201ENST00000233575 PRB2P02812 416 aaPredicted RBP13.38□□□□□ -0.27
SNX17-201ENST00000233575 MGPP08493 103 aa13.38□□□□□ -0.27
SNX17-201ENST00000233575 RRN3P1Q2M238 152 aa13.38□□□□□ -0.27
SNX17-201ENST00000233575 FAM74A4Q5TZK3 123 aa13.38□□□□□ -0.27
SNX17-201ENST00000233575 BAGE3Q86Y29 109 aa13.38□□□□□ -0.27
SNX17-201ENST00000233575 ORMDL3Q8N138 153 aa13.38□□□□□ -0.27
SNX17-201ENST00000233575 HIST3H2BBQ8N257 126 aa13.38□□□□□ -0.27
SNX17-201ENST00000233575 DNHD1Q96M86 4753 aa13.38□□□□□ -0.27
SNX17-201ENST00000233575 OR10J3Q5JRS4 329 aa13.37□□□□□ -0.27
SNX17-201ENST00000233575 PRELID3AQ96N28 172 aa13.37□□□□□ -0.27
SNX17-201ENST00000233575 X6R8D5 127 aa13.37□□□□□ -0.27
SNX17-201ENST00000233575 MGAM2Q2M2H8 2515 aa13.37□□□□□ -0.27
SNX17-201ENST00000233575 IFITM10A6NMD0 228 aa13.37□□□□□ -0.27
SNX17-201ENST00000233575 SERF1AO75920 110 aa13.37□□□□□ -0.27
SNX17-201ENST00000233575 NPYP01303 97 aa13.37□□□□□ -0.27
SNX17-201ENST00000233575 CRYGDP07320 174 aa13.37□□□□□ -0.27
SNX17-201ENST00000233575 NACAE9PAV3 2078 aa13.36□□□□□ -0.27
SNX17-201ENST00000233575 C16orf74Q96GX8 76 aa13.36□□□□□ -0.27
SNX17-201ENST00000233575 SPXQ9BT56 116 aa13.36□□□□□ -0.27
SNX17-201ENST00000233575 SMIM17P0DL12 118 aa13.35□□□□□ -0.27
SNX17-201ENST00000233575 NOP10Q9NPE3 64 aaKnown RBP13.35□□□□□ -0.27
SNX17-201ENST00000233575 URB1-AS1Q96HZ7 61 aa13.35□□□□□ -0.27
SNX17-201ENST00000233575 TRGV1A0A0A0MS02 117 aa13.34□□□□□ -0.27
SNX17-201ENST00000233575 Q6ZTI0 123 aa13.34□□□□□ -0.27
SNX17-201ENST00000233575 IGHV3-73A0A0B4J1V6 119 aa13.34□□□□□ -0.27
SNX17-201ENST00000233575 EMP1P54849 157 aa13.34□□□□□ -0.27
SNX17-201ENST00000233575 RASL10AQ92737 203 aa13.34□□□□□ -0.27
SNX17-201ENST00000233575 LOC389332A0A1B0GUA5 103 aa13.33□□□□□ -0.28
SNX17-201ENST00000233575 PPBPP02775 128 aa13.33□□□□□ -0.28
SNX17-201ENST00000233575 S100A2P29034 98 aa13.33□□□□□ -0.28
SNX17-201ENST00000233575 POM121L12Q8N7R1 296 aa13.33□□□□□ -0.28
SNX17-201ENST00000233575 NRACQ8N912 160 aa13.33□□□□□ -0.28
SNX17-201ENST00000233575 PTH2Q96A98 100 aa13.33□□□□□ -0.28
SNX17-201ENST00000233575 A8MZ25 164 aa13.32□□□□□ -0.28
SNX17-201ENST00000233575 F5H697 171 aa13.32□□□□□ -0.28
SNX17-201ENST00000233575 TNFRSF6BO95407 300 aa13.32□□□□□ -0.28
SNX17-201ENST00000233575 CFAP126Q5VTH2 177 aa13.32□□□□□ -0.28
SNX17-201ENST00000233575 SUMO4Q6EEV6 95 aa13.32□□□□□ -0.28
SNX17-201ENST00000233575 RPL39LQ96EH5 51 aaKnown RBP13.32□□□□□ -0.28
SNX17-201ENST00000233575 DAZ2Q13117 558 aaKnown RBP13.32□□□□□ -0.28
SNX17-201ENST00000233575 NIT1Q86X76 327 aa13.32□□□□□ -0.28
SNX17-201ENST00000233575 OR11H2Q8NH07 326 aa13.32□□□□□ -0.28
SNX17-201ENST00000233575 MRAP2Q96G30 205 aa13.32□□□□□ -0.28
SNX17-201ENST00000233575 FABP4P15090 132 aa13.31□□□□□ -0.28
SNX17-201ENST00000233575 RIPPLY3P57055 190 aa13.31□□□□□ -0.28
SNX17-201ENST00000233575 ZNF56Q15929 161 aa13.31□□□□□ -0.28
SNX17-201ENST00000233575 UFSP1Q6NVU6 142 aa13.31□□□□□ -0.28
SNX17-201ENST00000233575 RNASEKQ6P5S7 137 aaKnown RBP13.31□□□□□ -0.28
SNX17-201ENST00000233575 HIST1H2BLQ99880 126 aa13.31□□□□□ -0.28
SNX17-201ENST00000233575 A8MWV9 139 aa13.3□□□□□ -0.28
SNX17-201ENST00000233575 IFI27P40305 119 aaPredicted RBP13.3□□□□□ -0.28
SNX17-201ENST00000233575 PIK3CD-AS1Q5SR53 167 aa13.3□□□□□ -0.28
SNX17-201ENST00000233575 DEFB4AO15263 64 aa13.3□□□□□ -0.28
SNX17-201ENST00000233575 Q6ZWC4 215 aa13.3□□□□□ -0.28
SNX17-201ENST00000233575 RNF183Q96D59 192 aa13.3□□□□□ -0.28
SNX17-201ENST00000233575 ESDP10768 282 aa13.29□□□□□ -0.28
SNX17-201ENST00000233575 OVOL2Q9BRP0 275 aa13.29□□□□□ -0.28
SNX17-201ENST00000233575 GAGE12BA1L429 117 aa13.29□□□□□ -0.28
SNX17-201ENST00000233575 RS1O15537 224 aa13.29□□□□□ -0.28
SNX17-201ENST00000233575 GAGE7O76087 117 aa13.29□□□□□ -0.28
SNX17-201ENST00000233575 GAGE12FP0CL80 117 aa13.29□□□□□ -0.28
SNX17-201ENST00000233575 GAGE12GP0CL81 117 aa13.29□□□□□ -0.28
SNX17-201ENST00000233575 GAGE12IP0CL82 117 aa13.29□□□□□ -0.28
SNX17-201ENST00000233575 Q6ZSN1 163 aa13.29□□□□□ -0.28
SNX17-201ENST00000233575 RETNQ9HD89 108 aa13.29□□□□□ -0.28
SNX17-201ENST00000233575 SMIM9A6NGZ8 99 aa13.28□□□□□ -0.28
SNX17-201ENST00000233575 LGALS9BQ3B8N2 356 aa13.28□□□□□ -0.28
SNX17-201ENST00000233575 KPRPQ5T749 579 aaPredicted RBP13.28□□□□□ -0.28
SNX17-201ENST00000233575 FAM19A2Q8N3H0 131 aa13.28□□□□□ -0.28
SNX17-201ENST00000233575 K7EIL1 84 aa13.27□□□□□ -0.28
SNX17-201ENST00000233575 IGHV3-53P01767 116 aa13.27□□□□□ -0.28
SNX17-201ENST00000233575 LINC00614P0C842 121 aa13.27□□□□□ -0.28
SNX17-201ENST00000233575 PMCHL1Q16048 86 aa13.27□□□□□ -0.28
SNX17-201ENST00000233575 PRSS3P2Q8NHM4 247 aa13.27□□□□□ -0.28
SNX17-201ENST00000233575 ZNF479Q96JC4 524 aa13.27□□□□□ -0.28
SNX17-201ENST00000233575 LAMTOR2Q9Y2Q5 125 aa13.27□□□□□ -0.28
SNX17-201ENST00000233575 IGHV4-28A0A0C4DH34 117 aa13.27□□□□□ -0.29
SNX17-201ENST00000233575 M0QY20 66 aa13.27□□□□□ -0.29
SNX17-201ENST00000233575 MAP1LC3AQ9H492 121 aa13.27□□□□□ -0.29
SNX17-201ENST00000233575 BTF3P20290 206 aaKnown RBP13.26□□□□□ -0.29
SNX17-201ENST00000233575 PMCHP20382 165 aa13.26□□□□□ -0.29
SNX17-201ENST00000233575 OR10D4PQ8NGN7 298 aa13.26□□□□□ -0.29
SNX17-201ENST00000233575 TMEM18Q96B42 140 aa13.26□□□□□ -0.29
SNX17-201ENST00000233575 PACRGQ96M98 296 aaPredicted RBP13.26□□□□□ -0.29
SNX17-201ENST00000233575 P0DMU3 169 aa13.25□□□□□ -0.29
SNX17-201ENST00000233575 FAM231AP0DMU4 169 aa13.25□□□□□ -0.29
SNX17-201ENST00000233575 FAM231CP0DMU5 169 aa13.25□□□□□ -0.29
SNX17-201ENST00000233575 Q8NAQ8 132 aa13.25□□□□□ -0.29
SNX17-201ENST00000233575 OR4C5Q8NGB2 326 aa13.25□□□□□ -0.29
SNX17-201ENST00000233575 Q9UF83 564 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 111.5 ms