RNA–Protein interactions for RNA: ENST00000217402.2

CHMP4B-201, Transcript of charged multivesicular body protein 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4B, Length 1,646 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4B-201ENST00000217402 KCNIP4Q6PIL6 250 aa19.22■□□□□ 0.67
CHMP4B-201ENST00000217402 IMMP2LQ96T52 175 aa19.22■□□□□ 0.67
CHMP4B-201ENST00000217402 TRAV10A0A0B4J240 114 aa19.22■□□□□ 0.67
CHMP4B-201ENST00000217402 RIGQ13278 110 aa19.22■□□□□ 0.67
CHMP4B-201ENST00000217402 PHLDA1Q8WV24 401 aaPredicted RBP19.22■□□□□ 0.67
CHMP4B-201ENST00000217402 CRYGDP07320 174 aa19.21■□□□□ 0.67
CHMP4B-201ENST00000217402 TRGC1P0CF51 173 aa19.21■□□□□ 0.67
CHMP4B-201ENST00000217402 EVI2AP22794 236 aa19.21■□□□□ 0.67
CHMP4B-201ENST00000217402 TRGV4A0A0C4DH28 118 aa19.2■□□□□ 0.66
CHMP4B-201ENST00000217402 SMIM17P0DL12 118 aa19.2■□□□□ 0.66
CHMP4B-201ENST00000217402 S100PP25815 95 aa19.2■□□□□ 0.66
CHMP4B-201ENST00000217402 NACAE9PAV3 2078 aa19.19■□□□□ 0.66
CHMP4B-201ENST00000217402 CAMPP49913 170 aa19.18■□□□□ 0.66
CHMP4B-201ENST00000217402 FHL2Q14192 279 aa19.18■□□□□ 0.66
CHMP4B-201ENST00000217402 UFSP1Q6NVU6 142 aa19.18■□□□□ 0.66
CHMP4B-201ENST00000217402 RHODO00212 210 aa19.18■□□□□ 0.66
CHMP4B-201ENST00000217402 MGPP08493 103 aa19.17■□□□□ 0.66
CHMP4B-201ENST00000217402 ZFP2Q6ZN57 461 aa19.17■□□□□ 0.66
CHMP4B-201ENST00000217402 SMIM15Q7Z3B0 74 aa19.17■□□□□ 0.66
CHMP4B-201ENST00000217402 BTF3L4Q96K17 158 aa19.17■□□□□ 0.66
CHMP4B-201ENST00000217402 ZNF56Q15929 161 aa19.16■□□□□ 0.66
CHMP4B-201ENST00000217402 MUC7Q8TAX7 377 aa19.16■□□□□ 0.66
CHMP4B-201ENST00000217402 KIF25-AS1Q9Y6Z4 181 aa19.16■□□□□ 0.66
CHMP4B-201ENST00000217402 DNAH7Q8WXX0 4024 aa19.16■□□□□ 0.66
CHMP4B-201ENST00000217402 HBBP68871 147 aa19.15■□□□□ 0.66
CHMP4B-201ENST00000217402 ZFAND6Q6FIF0 208 aa19.15■□□□□ 0.66
CHMP4B-201ENST00000217402 DPH3P1Q9H4G8 78 aa19.15■□□□□ 0.66
CHMP4B-201ENST00000217402 A0A1B0GXF2 115 aa19.14■□□□□ 0.66
CHMP4B-201ENST00000217402 Q6ZSN1 163 aa19.14■□□□□ 0.66
CHMP4B-201ENST00000217402 ATP5L2Q7Z4Y8 100 aa19.14■□□□□ 0.66
CHMP4B-201ENST00000217402 CIDEAO60543 219 aa19.14■□□□□ 0.65
CHMP4B-201ENST00000217402 TMEM88Q6PEY1 159 aa19.14■□□□□ 0.65
CHMP4B-201ENST00000217402 CBLN2Q8IUK8 224 aa19.14■□□□□ 0.65
CHMP4B-201ENST00000217402 HHLA3Q9XRX5 114 aa19.14■□□□□ 0.65
CHMP4B-201ENST00000217402 TRAV26-1A0A087WT03 109 aa19.13■□□□□ 0.65
CHMP4B-201ENST00000217402 A0A0J9YY99 117 aa19.13■□□□□ 0.65
CHMP4B-201ENST00000217402 A0A1B0GW15 77 aa19.13■□□□□ 0.65
CHMP4B-201ENST00000217402 F5H697 171 aa19.13■□□□□ 0.65
CHMP4B-201ENST00000217402 GATA1P15976 413 aaPredicted RBP19.13■□□□□ 0.65
CHMP4B-201ENST00000217402 LINC00315P59091 139 aa19.12■□□□□ 0.65
CHMP4B-201ENST00000217402 TMEM191AQ9H0A3 160 aa19.12■□□□□ 0.65
CHMP4B-201ENST00000217402 TRAV9-1A0A075B6T8 112 aa19.11■□□□□ 0.65
CHMP4B-201ENST00000217402 S100A1P23297 94 aa19.11■□□□□ 0.65
CHMP4B-201ENST00000217402 CEMP1Q6PRD7 247 aaPredicted RBP19.11■□□□□ 0.65
CHMP4B-201ENST00000217402 PRO0255Q9UI72 69 aa19.11■□□□□ 0.65
CHMP4B-201ENST00000217402 NUPR2A6NF83 97 aa19.11■□□□□ 0.65
CHMP4B-201ENST00000217402 S100A8P05109 93 aa19.11■□□□□ 0.65
CHMP4B-201ENST00000217402 CRYBA4P53673 196 aa19.11■□□□□ 0.65
CHMP4B-201ENST00000217402 SLC25A29Q8N8R3 303 aa19.11■□□□□ 0.65
CHMP4B-201ENST00000217402 IGLL5B9A064 214 aa19.09■□□□□ 0.65
CHMP4B-201ENST00000217402 PAX4O43316 350 aa19.09■□□□□ 0.65
CHMP4B-201ENST00000217402 SLAQ13239 276 aa19.09■□□□□ 0.65
CHMP4B-201ENST00000217402 ELOBQ15370 118 aa19.09■□□□□ 0.65
CHMP4B-201ENST00000217402 VSIG2Q96IQ7 327 aa19.09■□□□□ 0.65
CHMP4B-201ENST00000217402 SMCO4Q9NRQ5 59 aa19.09■□□□□ 0.65
CHMP4B-201ENST00000217402 TGIF2-C20orf24A0A0A6YYL0 155 aa19.08■□□□□ 0.65
CHMP4B-201ENST00000217402 RAB4BP61018 213 aa19.08■□□□□ 0.65
CHMP4B-201ENST00000217402 AMN1Q8IY45 258 aa19.08■□□□□ 0.65
CHMP4B-201ENST00000217402 SCO1O75880 301 aa19.07■□□□□ 0.64
CHMP4B-201ENST00000217402 TRBV6-4A0A1B0GX49 114 aa19.07■□□□□ 0.64
CHMP4B-201ENST00000217402 K7EQD1 137 aa19.07■□□□□ 0.64
CHMP4B-201ENST00000217402 SUMO4Q6EEV6 95 aa19.07■□□□□ 0.64
CHMP4B-201ENST00000217402 TRAV26-2A0A0B4J265 109 aa19.06■□□□□ 0.64
CHMP4B-201ENST00000217402 LOC100131303A0A0U1RQF7 123 aa19.06■□□□□ 0.64
CHMP4B-201ENST00000217402 P0DMU3 169 aa19.06■□□□□ 0.64
CHMP4B-201ENST00000217402 FAM231AP0DMU4 169 aa19.06■□□□□ 0.64
CHMP4B-201ENST00000217402 FAM231CP0DMU5 169 aa19.06■□□□□ 0.64
CHMP4B-201ENST00000217402 RHOHQ15669 191 aa19.06■□□□□ 0.64
CHMP4B-201ENST00000217402 RNF185Q96GF1 192 aa19.05■□□□□ 0.64
CHMP4B-201ENST00000217402 KLK5Q9Y337 293 aaPredicted RBP19.05■□□□□ 0.64
CHMP4B-201ENST00000217402 CSMD3Q7Z407 3707 aa19.05■□□□□ 0.64
CHMP4B-201ENST00000217402 GATD1Q8NB37 220 aa19.04■□□□□ 0.64
CHMP4B-201ENST00000217402 PRADC1Q9BSG0 188 aa19.04■□□□□ 0.64
CHMP4B-201ENST00000217402 GYPEP15421 78 aa19.03■□□□□ 0.64
CHMP4B-201ENST00000217402 RAB4AP20338 218 aa19.03■□□□□ 0.64
CHMP4B-201ENST00000217402 FAM104BQ5XKR9 115 aa19.03■□□□□ 0.64
CHMP4B-201ENST00000217402 RASL11AQ6T310 242 aa19.03■□□□□ 0.64
CHMP4B-201ENST00000217402 YPEL4Q96NS1 127 aa19.03■□□□□ 0.64
CHMP4B-201ENST00000217402 Q9UF83 564 aa19.03■□□□□ 0.64
CHMP4B-201ENST00000217402 FAM210BQ96KR6 192 aa19.03■□□□□ 0.64
CHMP4B-201ENST00000217402 NUDT3O95989 172 aa19.02■□□□□ 0.64
CHMP4B-201ENST00000217402 TRBV24-1A0A075B6N3 115 aa19.01■□□□□ 0.63
CHMP4B-201ENST00000217402 M0QY20 66 aa19.01■□□□□ 0.63
CHMP4B-201ENST00000217402 TMEM136Q6ZRR5 245 aa19.01■□□□□ 0.63
CHMP4B-201ENST00000217402 H3BNG1 76 aa19■□□□□ 0.63
CHMP4B-201ENST00000217402 MRPL51Q4U2R6 128 aaKnown RBP19■□□□□ 0.63
CHMP4B-201ENST00000217402 STARD9Q9P2P6 4700 aa18.99■□□□□ 0.63
CHMP4B-201ENST00000217402 GAGE12JA6NER3 117 aa18.99■□□□□ 0.63
CHMP4B-201ENST00000217402 C3orf84H3BNL1 204 aa18.99■□□□□ 0.63
CHMP4B-201ENST00000217402 H7C1H1 209 aa18.99■□□□□ 0.63
CHMP4B-201ENST00000217402 NCR2O95944 276 aa18.99■□□□□ 0.63
CHMP4B-201ENST00000217402 GAGE1Q13065 139 aa18.99■□□□□ 0.63
CHMP4B-201ENST00000217402 GAGE4Q13068 117 aa18.99■□□□□ 0.63
CHMP4B-201ENST00000217402 GAGE5Q13069 117 aa18.99■□□□□ 0.63
CHMP4B-201ENST00000217402 GAGE13Q4V321 117 aa18.99■□□□□ 0.63
CHMP4B-201ENST00000217402 ICOSQ9Y6W8 199 aa18.99■□□□□ 0.63
CHMP4B-201ENST00000217402 SMKR1H3BMG3 65 aa18.98■□□□□ 0.63
CHMP4B-201ENST00000217402 GAS8-AS1O95177 125 aa18.98■□□□□ 0.63
CHMP4B-201ENST00000217402 CASC10Q5T4H9 136 aa18.98■□□□□ 0.63
CHMP4B-201ENST00000217402 A0A096LPF7 62 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms