RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 RBMY1DP0C7P1 496 aaKnown RBP21.89■■□□□ 1.09
PABPN1-201ENST00000216727 ZNF124Q15973 351 aa21.88■■□□□ 1.09
PABPN1-201ENST00000216727 Q6ZN92 141 aa21.88■■□□□ 1.09
PABPN1-201ENST00000216727 K7EMI3 77 aa21.87■■□□□ 1.09
PABPN1-201ENST00000216727 RBMY1A1P0DJD3 496 aaKnown RBP21.87■■□□□ 1.09
PABPN1-201ENST00000216727 RBMY1CP0DJD4 496 aa21.87■■□□□ 1.09
PABPN1-201ENST00000216727 RBMY1FQ15415 496 aaKnown RBP21.87■■□□□ 1.09
PABPN1-201ENST00000216727 RPL39LQ96EH5 51 aaKnown RBP21.87■■□□□ 1.09
PABPN1-201ENST00000216727 CLUHP3Q96NS8 147 aa21.86■■□□□ 1.09
PABPN1-201ENST00000216727 GOLT1BQ9Y3E0 138 aa21.86■■□□□ 1.09
PABPN1-201ENST00000216727 TCAPO15273 167 aa21.85■■□□□ 1.09
PABPN1-201ENST00000216727 JPT2Q9H910 190 aa21.85■■□□□ 1.09
PABPN1-201ENST00000216727 PROK1P58294 105 aa21.85■■□□□ 1.09
PABPN1-201ENST00000216727 HNRNPA3P51991 378 aaKnown RBP21.84■■□□□ 1.09
PABPN1-201ENST00000216727 C18orf15Q96N68 181 aa21.84■■□□□ 1.09
PABPN1-201ENST00000216727 CBY3A6NI87 242 aa21.83■■□□□ 1.09
PABPN1-201ENST00000216727 ORMDL2Q53FV1 153 aa21.83■■□□□ 1.09
PABPN1-201ENST00000216727 RPL32P62910 135 aaKnown RBP21.82■■□□□ 1.08
PABPN1-201ENST00000216727 ODF3L2Q3SX64 289 aa21.82■■□□□ 1.08
PABPN1-201ENST00000216727 ATP5LO75964 103 aa21.82■■□□□ 1.08
PABPN1-201ENST00000216727 A0A087WWL8 130 aa21.81■■□□□ 1.08
PABPN1-201ENST00000216727 SUMO4Q6EEV6 95 aa21.81■■□□□ 1.08
PABPN1-201ENST00000216727 MRPS16Q9Y3D3 137 aaKnown RBP21.81■■□□□ 1.08
PABPN1-201ENST00000216727 SETD2Q9BYW2 2564 aaPredicted RBP21.8■■□□□ 1.08
PABPN1-201ENST00000216727 ADARB2-AS1A8MUL3 147 aa21.79■■□□□ 1.08
PABPN1-201ENST00000216727 NUDT3O95989 172 aa21.79■■□□□ 1.08
PABPN1-201ENST00000216727 NOTCH2Q04721 2471 aa21.79■■□□□ 1.08
PABPN1-201ENST00000216727 CRYGDP07320 174 aa21.79■■□□□ 1.08
PABPN1-201ENST00000216727 WNK1Q9H4A3 2382 aa21.78■■□□□ 1.08
PABPN1-201ENST00000216727 LINC00467Q9BRT7 94 aa21.78■■□□□ 1.08
PABPN1-201ENST00000216727 ZNF876PQ49A33 203 aa21.77■■□□□ 1.08
PABPN1-201ENST00000216727 OTOGQ6ZRI0 2925 aa21.77■■□□□ 1.08
PABPN1-201ENST00000216727 F5H697 171 aa21.76■■□□□ 1.07
PABPN1-201ENST00000216727 PRSS1P07477 247 aa21.76■■□□□ 1.07
PABPN1-201ENST00000216727 CSTL1Q9H114 145 aa21.76■■□□□ 1.07
PABPN1-201ENST00000216727 ODF1Q14990 250 aa21.75■■□□□ 1.07
PABPN1-201ENST00000216727 OR11H12B2RN74 326 aa21.75■■□□□ 1.07
PABPN1-201ENST00000216727 FAM74A4Q5TZK3 123 aa21.75■■□□□ 1.07
PABPN1-201ENST00000216727 SLC25A34Q6PIV7 304 aa21.75■■□□□ 1.07
PABPN1-201ENST00000216727 DKK2Q9UBU2 259 aa21.75■■□□□ 1.07
PABPN1-201ENST00000216727 TRBV6-5A0A0K0K1A5 114 aa21.74■■□□□ 1.07
PABPN1-201ENST00000216727 INSP01308 110 aa21.74■■□□□ 1.07
PABPN1-201ENST00000216727 POLR2KP53803 58 aaKnown RBP21.74■■□□□ 1.07
PABPN1-201ENST00000216727 LURAP1LQ8IV03 231 aa21.74■■□□□ 1.07
PABPN1-201ENST00000216727 TOMM6Q96B49 74 aa21.74■■□□□ 1.07
PABPN1-201ENST00000216727 ZMAT4Q9H898 229 aa21.74■■□□□ 1.07
PABPN1-201ENST00000216727 A0A1B0GV90 55 aa21.73■■□□□ 1.07
PABPN1-201ENST00000216727 SAP30O75446 220 aa21.72■■□□□ 1.07
PABPN1-201ENST00000216727 CMC4P56277 68 aaPredicted RBP21.72■■□□□ 1.07
PABPN1-201ENST00000216727 PIK3CD-AS1Q5SR53 167 aa21.72■■□□□ 1.07
PABPN1-201ENST00000216727 STHQ8IWL8 128 aa21.72■■□□□ 1.07
PABPN1-201ENST00000216727 HTN1P15515 57 aa21.72■■□□□ 1.07
PABPN1-201ENST00000216727 M0QY20 66 aa21.71■■□□□ 1.07
PABPN1-201ENST00000216727 PTH2Q96A98 100 aa21.71■■□□□ 1.07
PABPN1-201ENST00000216727 IGLV1-51P01701 117 aa21.7■■□□□ 1.06
PABPN1-201ENST00000216727 COX8AP10176 69 aa21.7■■□□□ 1.06
PABPN1-201ENST00000216727 ZNF56Q15929 161 aa21.7■■□□□ 1.06
PABPN1-201ENST00000216727 NSUN5P1Q3KNT7 163 aa21.7■■□□□ 1.06
PABPN1-201ENST00000216727 TRPT1Q86TN4 253 aaKnown RBP21.7■■□□□ 1.06
PABPN1-201ENST00000216727 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP21.7■■□□□ 1.06
PABPN1-201ENST00000216727 VCYO14598 125 aa21.7■■□□□ 1.06
PABPN1-201ENST00000216727 ZNF415Q09FC8 603 aa21.7■■□□□ 1.06
PABPN1-201ENST00000216727 SETXQ7Z333 2677 aaKnown RBP21.69■■□□□ 1.06
PABPN1-201ENST00000216727 LINC01587Q99440 93 aa21.69■■□□□ 1.06
PABPN1-201ENST00000216727 M0R2P5 195 aa21.68■■□□□ 1.06
PABPN1-201ENST00000216727 ANKRD39Q53RE8 183 aa21.68■■□□□ 1.06
PABPN1-201ENST00000216727 NDUFA11Q86Y39 141 aa21.68■■□□□ 1.06
PABPN1-201ENST00000216727 G0S2P27469 103 aa21.68■■□□□ 1.06
PABPN1-201ENST00000216727 FAM110AQ9BQ89 295 aa21.68■■□□□ 1.06
PABPN1-201ENST00000216727 TRBV27A0A0K0K1C4 114 aa21.67■■□□□ 1.06
PABPN1-201ENST00000216727 INAFM1C9JVW0 142 aa21.67■■□□□ 1.06
PABPN1-201ENST00000216727 C2orf66Q6UXQ4 117 aa21.67■■□□□ 1.06
PABPN1-201ENST00000216727 STPG4Q8N801 248 aa21.67■■□□□ 1.06
PABPN1-201ENST00000216727 SDHAF1A6NFY7 115 aa21.67■■□□□ 1.06
PABPN1-201ENST00000216727 NUTF2P61970 127 aaKnown RBP21.67■■□□□ 1.06
PABPN1-201ENST00000216727 SCGB3A1Q96QR1 104 aa21.67■■□□□ 1.06
PABPN1-201ENST00000216727 MORN3Q6PF18 240 aaPredicted RBP21.66■■□□□ 1.06
PABPN1-201ENST00000216727 C11orf72Q8NBR9 251 aa21.66■■□□□ 1.06
PABPN1-201ENST00000216727 KIR2DL4Q99706 377 aa21.66■■□□□ 1.06
PABPN1-201ENST00000216727 EDA2RQ9HAV5 297 aa21.66■■□□□ 1.06
PABPN1-201ENST00000216727 TRAV12-1A0A0B4J245 112 aa21.65■■□□□ 1.06
PABPN1-201ENST00000216727 LINC01549A6NIU2 74 aa21.65■■□□□ 1.06
PABPN1-201ENST00000216727 KRTAP10-3P60369 221 aa21.65■■□□□ 1.06
PABPN1-201ENST00000216727 BATFQ16520 125 aa21.65■■□□□ 1.06
PABPN1-201ENST00000216727 TP73-AS1Q9UF72 201 aa21.65■■□□□ 1.06
PABPN1-201ENST00000216727 IGKCP01834 107 aa21.65■■□□□ 1.06
PABPN1-201ENST00000216727 NEGR1Q7Z3B1 354 aa21.65■■□□□ 1.06
PABPN1-201ENST00000216727 HHLA3Q9XRX5 114 aa21.65■■□□□ 1.06
PABPN1-201ENST00000216727 A0A087WX48 190 aa21.64■■□□□ 1.05
PABPN1-201ENST00000216727 DPM2O94777 84 aa21.64■■□□□ 1.05
PABPN1-201ENST00000216727 PRM2P04554 102 aa21.64■■□□□ 1.05
PABPN1-201ENST00000216727 XCL2Q9UBD3 114 aa21.64■■□□□ 1.05
PABPN1-201ENST00000216727 A8MWV9 139 aa21.63■■□□□ 1.05
PABPN1-201ENST00000216727 SPXQ9BT56 116 aa21.63■■□□□ 1.05
PABPN1-201ENST00000216727 FOSL1P15407 271 aa21.63■■□□□ 1.05
PABPN1-201ENST00000216727 ZFP2Q6ZN57 461 aa21.63■■□□□ 1.05
PABPN1-201ENST00000216727 BEAN1Q3B7T3 259 aa21.62■■□□□ 1.05
PABPN1-201ENST00000216727 ERASQ7Z444 233 aa21.62■■□□□ 1.05
PABPN1-201ENST00000216727 FGF6P10767 208 aa21.61■■□□□ 1.05
PABPN1-201ENST00000216727 COL5A1-AS1Q5SY13 56 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms