RNA–Protein interactions for RNA: ENST00000216106.5

HMGXB4-201, Transcript of HMG-box containing 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGXB4, Length 4,047 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-201ENST00000216106 NEGR1Q7Z3B1 354 aa5.9□□□□□ -1.46
HMGXB4-201ENST00000216106 C9orf85Q96MD7 179 aa5.9□□□□□ -1.46
HMGXB4-201ENST00000216106 C20orf78Q9BR46 151 aa5.9□□□□□ -1.46
HMGXB4-201ENST00000216106 ZNF25P17030 456 aaPredicted RBP5.9□□□□□ -1.47
HMGXB4-201ENST00000216106 DEFB104AQ8WTQ1 72 aa5.9□□□□□ -1.47
HMGXB4-201ENST00000216106 F5H697 171 aa5.9□□□□□ -1.47
HMGXB4-201ENST00000216106 ATP5LO75964 103 aa5.9□□□□□ -1.47
HMGXB4-201ENST00000216106 RAX2Q96IS3 184 aa5.9□□□□□ -1.47
HMGXB4-201ENST00000216106 HECTD1Q9ULT8 2610 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 CD28P10747 220 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 HLA-DRB4P13762 266 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 CD300EQ496F6 205 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 SUMO4Q6EEV6 95 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 CSTL1Q9H114 145 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 HLA-DRB4X5D2U9 266 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 NMUP48645 174 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 ORMDL2Q53FV1 153 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 POM121L12Q8N7R1 296 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 RBMY1BA6NDE4 496 aaKnown RBP5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 RBMY1EA6NEQ0 496 aaKnown RBP5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 H3BMM0 161 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 RBMY1DP0C7P1 496 aaKnown RBP5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 FGF6P10767 208 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 DEFB114Q30KQ6 69 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 C2orf91Q6ZV80 131 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 Q6ZVH6 145 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 MAP6D1Q9H9H5 199 aa5.89□□□□□ -1.47
HMGXB4-201ENST00000216106 CBY3A6NI87 242 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 IGKCP01834 107 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 PRM2P04554 102 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 SYT8Q8NBV8 401 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 ZMAT4Q9H898 229 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 MRPL35Q9NZE8 188 aaKnown RBP5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 PPP1R17O96001 155 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 ZNF56Q15929 161 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 ZNF876PQ49A33 203 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 PCP2Q8IVA1 136 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 CITED2Q99967 270 aaPredicted RBP5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 TMEM208Q9BTX3 173 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 TMEM160Q9NX00 188 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 HHLA3Q9XRX5 114 aa5.88□□□□□ -1.47
HMGXB4-201ENST00000216106 TOMM6Q96B49 74 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 SCGB3A1Q96QR1 104 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 TRAV2A0A0B4J234 112 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 CCL24O00175 119 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 DPM2O94777 84 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 BVES-AS1Q5T3Y7 98 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 C2orf66Q6UXQ4 117 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 LINC01006Q8NI28 216 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 SMR3AQ99954 134 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 TRGV11A0A075B6L2 103 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 IGKV2D-26A0A0A0MRZ7 120 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 FHL3Q13643 280 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 ZC2HC1BQ5TFG8 222 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 BOD1L2Q8IYS8 172 aa5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 ZNF256Q9Y2P7 627 aaPredicted RBP5.87□□□□□ -1.47
HMGXB4-201ENST00000216106 K7EMI3 77 aa5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 CRYGDP07320 174 aa5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 RNASE1P07998 156 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 C12orf54Q6X4T0 127 aa5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 GTSCR1Q86UQ5 136 aa5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 TTTY13Q9BZ97 58 aa5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 A0A087WX48 190 aa5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 SDHAF1A6NFY7 115 aa5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 A8MTW9 85 aa5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 SETXQ7Z333 2677 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 POLR2KP53803 58 aaKnown RBP5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 SPAG8Q99932 426 aaPredicted RBP5.86□□□□□ -1.47
HMGXB4-201ENST00000216106 DLEU1O43261 78 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 HIVEP2P31629 2446 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 M0QY20 66 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 ODF3L2Q3SX64 289 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 MORN3Q6PF18 240 aaPredicted RBP5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 NOTCH2Q04721 2471 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 JMJD1CQ15652 2540 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 IGHV3-73A0A0B4J1V6 119 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 NPSP0C0P6 89 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 BAALCQ8WXS3 180 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 KIR2DL4Q99706 377 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 TP53TG1Q9Y2A0 90 aa5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 TSSC4Q9Y5U2 329 aaPredicted RBP5.85□□□□□ -1.47
HMGXB4-201ENST00000216106 RPL39P62891 51 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 ZFP2Q6ZN57 461 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 NEXN-AS1Q8NBZ9 246 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 OTOGQ6ZRI0 2925 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 F8VRH5 84 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 VCYO14598 125 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 RPL32P62910 135 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 ERASQ7Z444 233 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 CYSLTR1Q9Y271 337 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 COX11Q9Y6N1 276 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 NACAE9PAV3 2078 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 TRAV12-1A0A0B4J245 112 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 H7C1H1 209 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 PLNP26678 52 aa5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 ZNF418Q8TF45 676 aaPredicted RBP5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 CHTOPQ9Y3Y2 248 aaKnown RBP5.84□□□□□ -1.47
HMGXB4-201ENST00000216106 TMEM97Q5BJF2 176 aa5.83□□□□□ -1.48
HMGXB4-201ENST00000216106 LINC01587Q99440 93 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms