RNA–Protein interactions for RNA: ENST00000006053.6

CX3CL1-201, Transcript of C-X3-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CX3CL1, Length 3,321 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1-201ENST00000006053 SRSF9Q13242 221 aaKnown RBP eCLIP7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 C11orf71Q6IPW1 123 aa7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 NEXN-AS1Q8NBZ9 246 aa7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 TOMM6Q96B49 74 aa7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 MRPL53Q96EL3 112 aaKnown RBP7.99□□□□□ -1.13
CX3CL1-201ENST00000006053 TRBV7-1A0A0A6YYK4 115 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 BAALCQ8WXS3 180 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 DPH3P1Q9H4G8 78 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 SONP18583 2426 aaKnown RBP7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 LOC107984156A0A0G2JMH3 177 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 SNCGO76070 127 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 IFITM1P13164 125 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 SLC25A16P16260 332 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 RNASE4P34096 147 aaKnown RBP7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 ASIPP42127 132 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 PSMB2P49721 201 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 ARL17AQ8IVW1 177 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 KLHL30-AS1Q8NEE0 82 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 OR10J6PQ8NGY7 276 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 F6UB75 175 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 GNRH2O43555 120 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 PRB1P04280 392 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 UBE2E1P51965 193 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 FBXL19-AS1Q494R0 122 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 PLEKHB2Q96CS7 222 aa7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 CSDC2Q9Y534 153 aaKnown RBP7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 HRNRQ86YZ3 2850 aaPredicted RBP7.98□□□□□ -1.13
CX3CL1-201ENST00000006053 TRAV21A0A0B4J279 112 aa7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 LINC01549A6NIU2 74 aa7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 C9orf139Q6ZV77 190 aa7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 AJUBAQ96IF1 538 aa7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 UTP20O75691 2785 aaKnown RBP7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 CENPVL3A0A0U1RRI6 287 aa7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 TRBV12-3P01733 135 aa7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 ADORA2A-AS1P86434 159 aa7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 MORN3Q6PF18 240 aaPredicted RBP7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 UNQ9165/PRO28630Q6UXU0 137 aa7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 ZFAND2AQ8N6M9 145 aa7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 CELSR1Q9NYQ6 3014 aa7.97□□□□□ -1.13
CX3CL1-201ENST00000006053 U3KQE9 123 aa7.96□□□□□ -1.13
CX3CL1-201ENST00000006053 PPDPFLQ8WWR9 84 aa7.96□□□□□ -1.14
CX3CL1-201ENST00000006053 DUSP14O95147 198 aaKnown RBP7.96□□□□□ -1.14
CX3CL1-201ENST00000006053 IGHV3-11P01762 117 aa7.96□□□□□ -1.14
CX3CL1-201ENST00000006053 SMCPP49901 116 aaPredicted RBP7.96□□□□□ -1.14
CX3CL1-201ENST00000006053 LINC00477Q96M19 166 aa7.96□□□□□ -1.14
CX3CL1-201ENST00000006053 TRAV41A0A0B4J266 112 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 KLRB1Q12918 225 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 MRPL23Q16540 153 aaKnown RBP7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 TRAV4A0A0B4J268 109 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 A0A1W2PPR1 153 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 RHODO00212 210 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 C5orf56Q8N8D9 126 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 ITLN2Q8WWU7 325 aaPredicted RBP7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 CARD19Q96LW7 228 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 CFAP46Q8IYW2 2715 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 NPFFO15130 113 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 ZNF688P0C7X2 276 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 SRD5A1P18405 259 aa7.95□□□□□ -1.14
CX3CL1-201ENST00000006053 CFAP126Q5VTH2 177 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 ZFP2Q6ZN57 461 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 GPHB5Q86YW7 130 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 RNF223E7ERA6 249 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 F5H697 171 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 GNLYP22749 145 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 ATP6V0E2Q8NHE4 81 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 DLX4Q92988 240 aaPredicted RBP7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 BPESC1Q9GZL8 116 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 JPT2Q9H910 190 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 TP53TG1Q9Y2A0 90 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 LENEPQ9Y5L5 61 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 ITPR1Q14643 2758 aa7.94□□□□□ -1.14
CX3CL1-201ENST00000006053 LOC107984640A0A0U1RRK4 108 aa7.93□□□□□ -1.14
CX3CL1-201ENST00000006053 C11orf86A6NJI1 115 aa7.93□□□□□ -1.14
CX3CL1-201ENST00000006053 OVOL1O14753 267 aa7.93□□□□□ -1.14
CX3CL1-201ENST00000006053 LINC01619G3V211 115 aa7.93□□□□□ -1.14
CX3CL1-201ENST00000006053 UCNP55089 124 aa7.93□□□□□ -1.14
CX3CL1-201ENST00000006053 TMEM262E9PQX1 116 aa7.93□□□□□ -1.14
CX3CL1-201ENST00000006053 RNASE3P12724 160 aaKnown RBP7.93□□□□□ -1.14
CX3CL1-201ENST00000006053 RPL39P62891 51 aaKnown RBP7.93□□□□□ -1.14
CX3CL1-201ENST00000006053 TMEM170BQ5T4T1 132 aa7.93□□□□□ -1.14
CX3CL1-201ENST00000006053 BRD3OSQ6XYD6 125 aa7.93□□□□□ -1.14
CX3CL1-201ENST00000006053 A0A087WWL8 130 aa7.92□□□□□ -1.14
CX3CL1-201ENST00000006053 CRLF1O75462 422 aa7.92□□□□□ -1.14
CX3CL1-201ENST00000006053 LY6EQ16553 131 aa7.92□□□□□ -1.14
CX3CL1-201ENST00000006053 MYO9AB2RTY4 2548 aa7.92□□□□□ -1.14
CX3CL1-201ENST00000006053 ZFHX3Q15911 3703 aa7.92□□□□□ -1.14
CX3CL1-201ENST00000006053 CRYGDP07320 174 aa7.92□□□□□ -1.14
CX3CL1-201ENST00000006053 KLK9Q2XQG4 91 aa7.92□□□□□ -1.14
CX3CL1-201ENST00000006053 KLK9Q9UKQ9 250 aa7.92□□□□□ -1.14
CX3CL1-201ENST00000006053 HERVK_113P61574 105 aa7.91□□□□□ -1.14
CX3CL1-201ENST00000006053 TEN1Q86WV5 123 aa7.91□□□□□ -1.14
CX3CL1-201ENST00000006053 NRGNQ92686 78 aa7.91□□□□□ -1.14
CX3CL1-201ENST00000006053 MOB4Q9Y3A3 225 aa7.91□□□□□ -1.14
CX3CL1-201ENST00000006053 SMIM9A6NGZ8 99 aa7.91□□□□□ -1.14
CX3CL1-201ENST00000006053 FAM223BA6NKX1 122 aa7.91□□□□□ -1.14
CX3CL1-201ENST00000006053 FAM223AQ8IWN6 122 aa7.91□□□□□ -1.14
CX3CL1-201ENST00000006053 IGSF10Q6WRI0 2623 aa7.91□□□□□ -1.14
CX3CL1-201ENST00000006053 TSHBP01222 138 aa7.91□□□□□ -1.14
CX3CL1-201ENST00000006053 LINC00694P0DN24 101 aa7.91□□□□□ -1.14
CX3CL1-201ENST00000006053 COX6B1P14854 86 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 133.1 ms