RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 C15orf32Q32M92 178 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 SPRNQ5BIV9 151 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 FAM167A-AS1Q96KT0 104 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 PEMTQ9UBM1 199 aa4.43□□□□□ -1.7
SCARB2-218ENST00000639715 WNK1Q9H4A3 2382 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 TRAV21A0A0B4J279 112 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 FAM236DA0A1B0GTK5 79 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 K7ENP7 123 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 OVOL1O14753 267 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 SH2D1AO60880 128 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 DNAL4O96015 105 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 ACYP1P07311 99 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 FAM236CP0DP71 79 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 PAPPA-AS1Q5QFB9 102 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 IL17RELQ6ZVW7 336 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 COPS9Q8WXC6 57 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 WDR87Q6ZQQ6 2873 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 NCKAP5O14513 1909 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 IGKV2-40A0A087WW87 121 aaPredicted RBP4.42□□□□□ -1.7
SCARB2-218ENST00000639715 TRBV7-1A0A0A6YYK4 115 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 PRSS46E5RG02 174 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 H3BRN7 92 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 IGKV2D-40P01614 121 aaPredicted RBP4.42□□□□□ -1.7
SCARB2-218ENST00000639715 EDN2P20800 178 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 RPS28P62857 69 aaKnown RBP4.42□□□□□ -1.7
SCARB2-218ENST00000639715 Q8N7P7 452 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 TPSG1Q9NRR2 321 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 SONP18583 2426 aaKnown RBP4.42□□□□□ -1.7
SCARB2-218ENST00000639715 MSMPQ1L6U9 139 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 ORMDL2Q53FV1 153 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 LINC00643Q86TS7 51 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 TMEM243Q9BU79 118 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 PRSS22Q9GZN4 317 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 TRBV7-3A0A075B6L6 115 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 IGHV3OR16-8A0A075B7F1 116 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 IGHV3-49A0A0A0MS15 119 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 SNRPD3P62318 126 aaKnown RBP4.42□□□□□ -1.7
SCARB2-218ENST00000639715 PAX8Q06710 450 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 DGAT2L7PQ6IED9 249 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 CTSZQ9UBR2 303 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 HHLA3Q9XRX5 114 aa4.42□□□□□ -1.7
SCARB2-218ENST00000639715 IGHV3-64A0A075B6Q5 118 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 IGKV1OR2-108A0A075B7D4 117 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 IGHV3-66A0A0C4DH42 116 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 M0R381 172 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 PATE2Q6UY27 113 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 C9orf139Q6ZV77 190 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 Q8N8P6 123 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 MALP21145 153 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 IMUPQ9GZP8 106 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 MOB4Q9Y3A3 225 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 CACNA1AO00555 2505 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 MED13LQ71F56 2210 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 SPG11Q96JI7 2443 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 C19orf71A6NCJ1 209 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 GATA1P15976 413 aaPredicted RBP4.41□□□□□ -1.7
SCARB2-218ENST00000639715 RBM3P98179 157 aaKnown RBP4.41□□□□□ -1.7
SCARB2-218ENST00000639715 LY6EQ16553 131 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 UTF1Q5T230 341 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 ZNF491Q8N8L2 437 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 FAM110DQ8TAY7 271 aaPredicted RBP4.41□□□□□ -1.7
SCARB2-218ENST00000639715 PIFOQ8TCI5 191 aa4.41□□□□□ -1.7
SCARB2-218ENST00000639715 UBE2E1P51965 193 aa4.4□□□□□ -1.7
SCARB2-218ENST00000639715 CRIP2P52943 208 aaPredicted RBP4.4□□□□□ -1.7
SCARB2-218ENST00000639715 ODF3Q96PU9 254 aa4.4□□□□□ -1.7
SCARB2-218ENST00000639715 OTOGLQ3ZCN5 2332 aa4.4□□□□□ -1.7
SCARB2-218ENST00000639715 COL4A2P08572 1712 aa4.4□□□□□ -1.7
SCARB2-218ENST00000639715 GP9P14770 177 aa4.4□□□□□ -1.7
SCARB2-218ENST00000639715 NSUN5P1Q3KNT7 163 aa4.4□□□□□ -1.7
SCARB2-218ENST00000639715 PRR25Q96S07 402 aa4.4□□□□□ -1.7
SCARB2-218ENST00000639715 CCL19Q99731 98 aa4.4□□□□□ -1.7
SCARB2-218ENST00000639715 ANKHD1Q8IWZ3 2542 aaKnown RBP4.4□□□□□ -1.71
SCARB2-218ENST00000639715 IGLV2-23P01705 113 aa4.4□□□□□ -1.71
SCARB2-218ENST00000639715 UBE2D3P61077 147 aa4.4□□□□□ -1.71
SCARB2-218ENST00000639715 UBE2D2P62837 147 aa4.4□□□□□ -1.71
SCARB2-218ENST00000639715 ZNRF2Q8NHG8 242 aa4.4□□□□□ -1.71
SCARB2-218ENST00000639715 PIEZO1Q92508 2521 aa4.4□□□□□ -1.71
SCARB2-218ENST00000639715 A0A0B4J2C4 111 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 IGKV3D-7A0A0C4DH55 119 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 FAM223BA6NKX1 122 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 H3BT86 120 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 S100A7L2Q5SY68 101 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 FAM223AQ8IWN6 122 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 USMG5Q96IX5 58 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 RETNQ9HD89 108 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 BPTFQ12830 3046 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 ZFHX2Q9C0A1 2572 aaPredicted RBP4.39□□□□□ -1.71
SCARB2-218ENST00000639715 A0A096LNJ9 63 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 TRBV6-1A0A0K0K1D8 114 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 I3L2K1 104 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 IGLV1-47P01700 117 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 LY6DQ14210 128 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 RHOHQ15669 191 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 Q8TAT8 98 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 DEFB104AQ8WTQ1 72 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 PLEKHB2Q96CS7 222 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 C7orf69Q9H7B7 122 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 WISP2O76076 250 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 IGKV1-17P01599 117 aa4.39□□□□□ -1.71
SCARB2-218ENST00000639715 ZNF22P17026 224 aaPredicted RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms