RNA–Protein interactions for RNA: ENST00000639300.1

SCARB2-216, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-216ENST00000639300 PMVKQ15126 192 aa11.21□□□□□ -0.62
SCARB2-216ENST00000639300 MORN3Q6PF18 240 aaPredicted RBP11.21□□□□□ -0.62
SCARB2-216ENST00000639300 TSPAN13O95857 204 aa11.2□□□□□ -0.62
SCARB2-216ENST00000639300 LINC00322Q6ZN03 302 aaPredicted RBP11.2□□□□□ -0.62
SCARB2-216ENST00000639300 TNRC6AQ8NDV7 1962 aaKnown RBP11.2□□□□□ -0.62
SCARB2-216ENST00000639300 LINC01619G3V211 115 aa11.2□□□□□ -0.62
SCARB2-216ENST00000639300 POLQO75417 2590 aa11.2□□□□□ -0.62
SCARB2-216ENST00000639300 GAGE12JA6NER3 117 aa11.19□□□□□ -0.62
SCARB2-216ENST00000639300 GAGE1Q13065 139 aa11.19□□□□□ -0.62
SCARB2-216ENST00000639300 GAGE4Q13068 117 aa11.19□□□□□ -0.62
SCARB2-216ENST00000639300 GAGE5Q13069 117 aa11.19□□□□□ -0.62
SCARB2-216ENST00000639300 LINC00574Q9H8X3 128 aa11.19□□□□□ -0.62
SCARB2-216ENST00000639300 PRIMA1Q86XR5 153 aa11.19□□□□□ -0.62
SCARB2-216ENST00000639300 DLX4Q92988 240 aaPredicted RBP11.19□□□□□ -0.62
SCARB2-216ENST00000639300 SIGMAR1Q99720 223 aa11.19□□□□□ -0.62
SCARB2-216ENST00000639300 ANKRD39Q53RE8 183 aa11.19□□□□□ -0.62
SCARB2-216ENST00000639300 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-216ENST00000639300 GTSF1LQ9H1H1 148 aa11.18□□□□□ -0.62
SCARB2-216ENST00000639300 CST9LQ9H4G1 147 aa11.18□□□□□ -0.62
SCARB2-216ENST00000639300 ADAMTSL5Q6ZMM2 481 aa11.18□□□□□ -0.62
SCARB2-216ENST00000639300 IGLV2-8P01709 118 aa11.18□□□□□ -0.62
SCARB2-216ENST00000639300 HOXD3P31249 432 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-216ENST00000639300 ETDBQ3ZM63 59 aa11.18□□□□□ -0.62
SCARB2-216ENST00000639300 RNASE13Q5GAN3 156 aaKnown RBP11.18□□□□□ -0.62
SCARB2-216ENST00000639300 Q71RC1 249 aaPredicted RBP11.18□□□□□ -0.62
SCARB2-216ENST00000639300 WI2-2373I1.2A0A1W2PRP0 233 aa11.18□□□□□ -0.62
SCARB2-216ENST00000639300 K7ERJ3 54 aa11.18□□□□□ -0.62
SCARB2-216ENST00000639300 FBXL19-AS1Q494R0 122 aa11.18□□□□□ -0.62
SCARB2-216ENST00000639300 PRRC2AP48634 2157 aaKnown RBP11.17□□□□□ -0.62
SCARB2-216ENST00000639300 A0A1B0GV72 72 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 LINC01548A6NM66 108 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 PAX4O43316 350 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 ZNRF2Q8NHG8 242 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 RPL39LQ96EH5 51 aaKnown RBP11.17□□□□□ -0.62
SCARB2-216ENST00000639300 TTTY13Q9BZ97 58 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 ELANEP08246 267 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 CMC4P56277 68 aaPredicted RBP11.17□□□□□ -0.62
SCARB2-216ENST00000639300 C5orf56Q8N8D9 126 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 FASNP49327 2511 aaKnown RBP11.17□□□□□ -0.62
SCARB2-216ENST00000639300 PRSS29PA6NIE9 313 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 I3L3M4 83 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 HLA-DRB4P13762 266 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 C1QTNF4Q9BXJ3 329 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 HLA-DRB4X5D2U9 266 aa11.17□□□□□ -0.62
SCARB2-216ENST00000639300 C9orf118A6NHY6 69 aa11.16□□□□□ -0.62
SCARB2-216ENST00000639300 RHODO00212 210 aa11.16□□□□□ -0.62
SCARB2-216ENST00000639300 MYMXA0A1B0GTQ4 84 aa11.16□□□□□ -0.62
SCARB2-216ENST00000639300 RBMY1BA6NDE4 496 aaKnown RBP11.16□□□□□ -0.62
SCARB2-216ENST00000639300 RBMY1EA6NEQ0 496 aaKnown RBP11.16□□□□□ -0.62
SCARB2-216ENST00000639300 RBMY1DP0C7P1 496 aaKnown RBP11.16□□□□□ -0.62
SCARB2-216ENST00000639300 RBMY1A1P0DJD3 496 aaKnown RBP11.16□□□□□ -0.62
SCARB2-216ENST00000639300 RBMY1CP0DJD4 496 aa11.16□□□□□ -0.62
SCARB2-216ENST00000639300 OCIAD2Q56VL3 154 aa11.16□□□□□ -0.62
SCARB2-216ENST00000639300 C6orf226Q5I0X4 101 aa11.16□□□□□ -0.62
SCARB2-216ENST00000639300 RASL10AQ92737 203 aa11.16□□□□□ -0.62
SCARB2-216ENST00000639300 GAGE7O76087 117 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 GAGE12FP0CL80 117 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 GAGE12GP0CL81 117 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 GAGE12IP0CL82 117 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 AMTNQ6UX39 209 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 C10orf105Q8TEF2 133 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 C10orf126Q8N4M7 172 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 LENEPQ9Y5L5 61 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 C9JAW5 83 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 DPH3Q96FX2 82 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 C20orf78Q9BR46 151 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 VPREB3Q9UKI3 123 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 LRP4O75096 1905 aa11.15□□□□□ -0.62
SCARB2-216ENST00000639300 PRUNE2Q8WUY3 3088 aa11.15□□□□□ -0.63
SCARB2-216ENST00000639300 RBAKDNA6NC62 111 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 J3QLI3 93 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 SIRPDQ9H106 197 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 C19orf71A6NCJ1 209 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 UNQ9165/PRO28630Q6UXU0 137 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 TMEM86BQ8N661 226 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 VWC2LB2RUY7 222 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 TRBV12-3P01733 135 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 AZU1P20160 251 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 CKS1BP61024 79 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 TMEM141Q96I45 108 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 ATP6V0BQ99437 205 aa11.14□□□□□ -0.63
SCARB2-216ENST00000639300 H3BUA1 57 aa11.13□□□□□ -0.63
SCARB2-216ENST00000639300 GDF5OSQ5U4N7 250 aa11.13□□□□□ -0.63
SCARB2-216ENST00000639300 C16orf54Q6UWD8 224 aa11.13□□□□□ -0.63
SCARB2-216ENST00000639300 MRPL53Q96EL3 112 aaKnown RBP11.13□□□□□ -0.63
SCARB2-216ENST00000639300 SLURP1P55000 103 aa11.13□□□□□ -0.63
SCARB2-216ENST00000639300 LMO4P61968 165 aa11.12□□□□□ -0.63
SCARB2-216ENST00000639300 ATXN8Q156A1 80 aa11.12□□□□□ -0.63
SCARB2-216ENST00000639300 LINC01545Q5VT33 79 aa11.12□□□□□ -0.63
SCARB2-216ENST00000639300 C2orf82Q6UX34 121 aa11.12□□□□□ -0.63
SCARB2-216ENST00000639300 TRAV8-3A0A0A6YYJ7 113 aa11.12□□□□□ -0.63
SCARB2-216ENST00000639300 GATD1Q8NB37 220 aa11.12□□□□□ -0.63
SCARB2-216ENST00000639300 K7EP13 123 aa11.12□□□□□ -0.63
SCARB2-216ENST00000639300 UNC80Q8N2C7 3258 aa11.12□□□□□ -0.63
SCARB2-216ENST00000639300 H3BMG7 143 aa11.11□□□□□ -0.63
SCARB2-216ENST00000639300 APRG1Q8IVJ8 170 aa11.11□□□□□ -0.63
SCARB2-216ENST00000639300 ZNF80P51504 273 aaPredicted RBP11.11□□□□□ -0.63
SCARB2-216ENST00000639300 ZNF493Q6ZR52 646 aa11.11□□□□□ -0.63
SCARB2-216ENST00000639300 YPEL4Q96NS1 127 aa11.11□□□□□ -0.63
SCARB2-216ENST00000639300 ZNF462Q96JM2 2506 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms