RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 TRBV7-7A0A0K0K1E9 115 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 IGLV3-25P01717 112 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 PATE4P0C8F1 98 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 CRIP2P52943 208 aaPredicted RBP3.39□□□□□ -1.87
SDCBP-213ENST00000630925 NANOS2P60321 138 aaKnown RBP3.39□□□□□ -1.87
SDCBP-213ENST00000630925 ZFP2Q6ZN57 461 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 CCL4L1Q8NHW4 92 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 GTSF1Q8WW33 167 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 XAGE1AQ9HD64 81 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 SPCS1Q9Y6A9 102 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 MUC22E2RYF6 1773 aaPredicted RBP3.39□□□□□ -1.87
SDCBP-213ENST00000630925 COL6A6A6NMZ7 2263 aa3.39□□□□□ -1.87
SDCBP-213ENST00000630925 TLN1Q9Y490 2541 aaKnown RBP3.39□□□□□ -1.87
SDCBP-213ENST00000630925 SCN8AQ9UQD0 1980 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 PIKFYVEQ9Y2I7 2098 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 IGLV1-50A0A075B6I6 118 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 A0A1W2PP18 115 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 ZNF705FA8MVS1 300 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-213ENST00000630925 ZNF705BP0CI00 300 aaPredicted RBP3.38□□□□□ -1.87
SDCBP-213ENST00000630925 IGHV3-30-3P0DP02 117 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 FUSP35637 526 aaKnown RBP eCLIP3.38□□□□□ -1.87
SDCBP-213ENST00000630925 RPL27AP46776 148 aaKnown RBP3.38□□□□□ -1.87
SDCBP-213ENST00000630925 PCBD1P61457 104 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 IL17AQ16552 155 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 CAMK2N1Q7Z7J9 78 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 VGLL1Q99990 258 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 PMCHL2Q9BQD1 86 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 RABAC1Q9UI14 185 aa3.38□□□□□ -1.87
SDCBP-213ENST00000630925 MGAQ8IWI9 3026 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 TRPM6Q9BX84 2022 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 IGHV3-66A0A0C4DH42 116 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 TIMM17BO60830 172 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 IGHV3-7P01780 117 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 ZNF688P0C7X2 276 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 RPS10P46783 165 aaKnown RBP3.37□□□□□ -1.87
SDCBP-213ENST00000630925 GNB1P62873 340 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 KRTAP19-4Q3LI73 84 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 FAM78AQ5JUQ0 283 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 LCE4AQ5TA78 99 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 LCE5AQ5TCM9 118 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.37□□□□□ -1.87
SDCBP-213ENST00000630925 C16orf47Q6ZP98 133 aaPredicted RBP3.37□□□□□ -1.87
SDCBP-213ENST00000630925 SIGLECL1Q8N7X8 197 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 OR10AG1Q8NH19 301 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 SPG11Q96JI7 2443 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 LRRK2Q5S007 2527 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 ACACAQ13085 2346 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 A0A1W2PPM0 123 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 E7EQL1 145 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 SERF1AO75920 110 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 T-ENOLP0DO92 83 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 LSM3P62310 102 aaKnown RBP3.37□□□□□ -1.87
SDCBP-213ENST00000630925 DYNLT1P63172 113 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 C2orf83Q53S99 150 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 FAM72AQ5TYM5 149 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 ZNF660Q6AZW8 331 aaPredicted RBP3.37□□□□□ -1.87
SDCBP-213ENST00000630925 FAM216BQ8N7L0 139 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 POM121L12Q8N7R1 296 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 C20orf203Q8NBC4 194 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 OR2T35Q8NGX2 323 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 MYOZ3Q8TDC0 251 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 SCRT2Q9NQ03 307 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 TAS2R4Q9NYW5 299 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 PDZD2O15018 2839 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 ABCA2Q9BZC7 2435 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 PLXNB1O43157 2135 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 DOCK7Q96N67 2140 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 HEATR5AQ86XA9 2040 aa3.37□□□□□ -1.87
SDCBP-213ENST00000630925 FBN1P35555 2871 aaKnown RBP3.37□□□□□ -1.87
SDCBP-213ENST00000630925 PTPRBP23467 1997 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 NOTCH4Q99466 2003 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 IGHV3-21A0A0B4J1V1 117 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 PMS2P5A8MQ11 134 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 ZNF736B4DX44 427 aaPredicted RBP3.36□□□□□ -1.87
SDCBP-213ENST00000630925 SDCBPO00560 298 aaPredicted RBP3.36□□□□□ -1.87
SDCBP-213ENST00000630925 SOCS3O14543 225 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 NFYAP23511 347 aaPredicted RBP3.36□□□□□ -1.87
SDCBP-213ENST00000630925 SSR2P43308 183 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 CIRBPQ14011 172 aaKnown RBP3.36□□□□□ -1.87
SDCBP-213ENST00000630925 CGB2Q6NT52 195 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 C11orf87Q6NUJ2 197 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 ATP11AUNQ6ZP68 121 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 ZNF627Q7L945 461 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 Q8N8P6 123 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 C15orf53Q8NAA6 179 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 NABP2Q9BQ15 211 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 UPK3BQ9BT76 320 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 TMEM242Q9NWH2 141 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 SNRNP200O75643 2136 aaKnown RBP3.36□□□□□ -1.87
SDCBP-213ENST00000630925 ADGRG4Q8IZF6 3080 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 CELSR1Q9NYQ6 3014 aa3.36□□□□□ -1.87
SDCBP-213ENST00000630925 IGHV3-49A0A0A0MS15 119 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 IGHV5-10-1A0A0J9YXX1 117 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 UBE2L5PA0A1B0GUS4 154 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 hADV29S1A0JD25 119 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 SIX6O95475 246 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 IGKCP01834 107 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 UBE2L3P68036 154 aaKnown RBP3.35□□□□□ -1.87
SDCBP-213ENST00000630925 PFN4Q8NHR9 129 aa3.35□□□□□ -1.87
SDCBP-213ENST00000630925 LINC01006Q8NI28 216 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms