RNA–Protein interactions for RNA: ENST00000625299.1

PNKP-218, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 428 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-218ENST00000625299 OR2T35Q8NGX2 323 aa9.55□□□□□ -0.88
PNKP-218ENST00000625299 UBE2WQ96B02 151 aa9.55□□□□□ -0.88
PNKP-218ENST00000625299 DAZAP1Q96EP5 407 aaKnown RBP9.55□□□□□ -0.88
PNKP-218ENST00000625299 C9orf85Q96MD7 179 aa9.55□□□□□ -0.88
PNKP-218ENST00000625299 NDFIP1Q9BT67 221 aa9.55□□□□□ -0.88
PNKP-218ENST00000625299 C11orf21Q9P2W6 132 aa9.55□□□□□ -0.88
PNKP-218ENST00000625299 A0A087WWC5 75 aa9.54□□□□□ -0.88
PNKP-218ENST00000625299 PLA2G10O15496 165 aa9.54□□□□□ -0.88
PNKP-218ENST00000625299 LINC00694P0DN24 101 aa9.54□□□□□ -0.88
PNKP-218ENST00000625299 ZNF80P51504 273 aaPredicted RBP9.54□□□□□ -0.88
PNKP-218ENST00000625299 LRRC37A5PQ49AS3 106 aa9.54□□□□□ -0.88
PNKP-218ENST00000625299 SAMD10Q9BYL1 202 aa9.54□□□□□ -0.88
PNKP-218ENST00000625299 PARLQ9H300 379 aa9.54□□□□□ -0.88
PNKP-218ENST00000625299 OR5AC2Q9NZP5 309 aa9.54□□□□□ -0.88
PNKP-218ENST00000625299 SEC11BP0C7V7 166 aa9.53□□□□□ -0.88
PNKP-218ENST00000625299 Q9UF83 564 aa9.53□□□□□ -0.88
PNKP-218ENST00000625299 TAAR5O14804 337 aa9.52□□□□□ -0.89
PNKP-218ENST00000625299 GCGP01275 180 aa9.52□□□□□ -0.89
PNKP-218ENST00000625299 RNASE3P12724 160 aaKnown RBP9.52□□□□□ -0.89
PNKP-218ENST00000625299 LGALSLQ3ZCW2 172 aaPredicted RBP9.52□□□□□ -0.89
PNKP-218ENST00000625299 NIT1Q86X76 327 aa9.52□□□□□ -0.89
PNKP-218ENST00000625299 C14orf178Q8N769 122 aaPredicted RBP9.52□□□□□ -0.89
PNKP-218ENST00000625299 LRP2P98164 4655 aa9.52□□□□□ -0.89
PNKP-218ENST00000625299 A0A087WX48 190 aa9.51□□□□□ -0.89
PNKP-218ENST00000625299 SIX6O95475 246 aa9.51□□□□□ -0.89
PNKP-218ENST00000625299 H2AFB2P0C5Z0 115 aa9.51□□□□□ -0.89
PNKP-218ENST00000625299 MT1HL1P0DM35 61 aa9.51□□□□□ -0.89
PNKP-218ENST00000625299 C14orf177Q52M58 125 aa9.51□□□□□ -0.89
PNKP-218ENST00000625299 KCNIP4Q6PIL6 250 aa9.51□□□□□ -0.89
PNKP-218ENST00000625299 A8MWV9 139 aa9.5□□□□□ -0.89
PNKP-218ENST00000625299 S100A4P26447 101 aaKnown RBP9.5□□□□□ -0.89
PNKP-218ENST00000625299 FGF8P55075 233 aaPredicted RBP9.5□□□□□ -0.89
PNKP-218ENST00000625299 ZFP69Q49AA0 526 aa9.5□□□□□ -0.89
PNKP-218ENST00000625299 ZFP2Q6ZN57 461 aa9.5□□□□□ -0.89
PNKP-218ENST00000625299 PTH2Q96A98 100 aa9.5□□□□□ -0.89
PNKP-218ENST00000625299 JPT2Q9H910 190 aa9.5□□□□□ -0.89
PNKP-218ENST00000625299 A0A1W2PPV4 95 aa9.49□□□□□ -0.89
PNKP-218ENST00000625299 HMGB3O15347 200 aaKnown RBP9.49□□□□□ -0.89
PNKP-218ENST00000625299 ELOBQ15370 118 aa9.49□□□□□ -0.89
PNKP-218ENST00000625299 DMRTA1Q5VZB9 504 aa9.49□□□□□ -0.89
PNKP-218ENST00000625299 SCGB1C1Q8TD33 95 aa9.49□□□□□ -0.89
PNKP-218ENST00000625299 LINC00479Q96M42 142 aa9.49□□□□□ -0.89
PNKP-218ENST00000625299 C1orf43Q9BWL3 253 aa9.49□□□□□ -0.89
PNKP-218ENST00000625299 SMIM3Q9BZL3 60 aa9.49□□□□□ -0.89
PNKP-218ENST00000625299 H0YIZ8 118 aa9.48□□□□□ -0.89
PNKP-218ENST00000625299 SMUG1Q53HV7 270 aa9.48□□□□□ -0.89
PNKP-218ENST00000625299 PQLC2Q6ZP29 291 aa9.48□□□□□ -0.89
PNKP-218ENST00000625299 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
PNKP-218ENST00000625299 ARL6IP6Q8N6S5 226 aa9.48□□□□□ -0.89
PNKP-218ENST00000625299 RBM38Q9H0Z9 239 aaKnown RBP9.48□□□□□ -0.89
PNKP-218ENST00000625299 PSG8Q9UQ74 426 aa9.48□□□□□ -0.89
PNKP-218ENST00000625299 HLA-DQA1P01909 254 aa9.47□□□□□ -0.89
PNKP-218ENST00000625299 CRPP02741 224 aa9.47□□□□□ -0.89
PNKP-218ENST00000625299 TCRAP04437 139 aa9.47□□□□□ -0.89
PNKP-218ENST00000625299 Q0VG73 95 aa9.47□□□□□ -0.89
PNKP-218ENST00000625299 FAM74A4Q5TZK3 123 aa9.47□□□□□ -0.89
PNKP-218ENST00000625299 ATRAIDQ6UW56 229 aa9.47□□□□□ -0.89
PNKP-218ENST00000625299 OR10G9Q8NGN4 311 aa9.47□□□□□ -0.89
PNKP-218ENST00000625299 OR2G3Q8NGZ4 309 aa9.47□□□□□ -0.89
PNKP-218ENST00000625299 FAM240BA0A1B0GVZ2 78 aa9.46□□□□□ -0.9
PNKP-218ENST00000625299 SERTM2A0A1B0GWG4 89 aa9.46□□□□□ -0.9
PNKP-218ENST00000625299 USP17L23D6RBM5 183 aa9.46□□□□□ -0.9
PNKP-218ENST00000625299 TMEM262E9PQX1 116 aa9.46□□□□□ -0.9
PNKP-218ENST00000625299 K7EQM0 130 aa9.46□□□□□ -0.9
PNKP-218ENST00000625299 RAB2AP61019 212 aa9.46□□□□□ -0.9
PNKP-218ENST00000625299 CHCHD7Q9BUK0 85 aa9.46□□□□□ -0.9
PNKP-218ENST00000625299 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.9
PNKP-218ENST00000625299 TNXBP22105 4242 aa9.46□□□□□ -0.9
PNKP-218ENST00000625299 ARL14EPLP0DKL9 152 aa9.45□□□□□ -0.9
PNKP-218ENST00000625299 ASIPP42127 132 aa9.45□□□□□ -0.9
PNKP-218ENST00000625299 FLI1Q01543 452 aaPredicted RBP9.45□□□□□ -0.9
PNKP-218ENST00000625299 UFSP1Q6NVU6 142 aa9.45□□□□□ -0.9
PNKP-218ENST00000625299 C5orf17Q8NAS9 161 aa9.45□□□□□ -0.9
PNKP-218ENST00000625299 HSPB11Q9Y547 144 aa9.45□□□□□ -0.9
PNKP-218ENST00000625299 IGKV3D-20A0A0C4DH25 116 aa9.44□□□□□ -0.9
PNKP-218ENST00000625299 H3BVH4 76 aa9.44□□□□□ -0.9
PNKP-218ENST00000625299 RHODO00212 210 aa9.44□□□□□ -0.9
PNKP-218ENST00000625299 Q6ZRU5 148 aa9.44□□□□□ -0.9
PNKP-218ENST00000625299 C15orf54Q8N8G6 183 aa9.44□□□□□ -0.9
PNKP-218ENST00000625299 ZC2HC1AQ96GY0 325 aa9.44□□□□□ -0.9
PNKP-218ENST00000625299 A0A087WWL8 130 aa9.43□□□□□ -0.9
PNKP-218ENST00000625299 PANO1I0J062 215 aa9.43□□□□□ -0.9
PNKP-218ENST00000625299 PIK3CD-AS1Q5SR53 167 aa9.43□□□□□ -0.9
PNKP-218ENST00000625299 ENHOQ6UWT2 76 aa9.43□□□□□ -0.9
PNKP-218ENST00000625299 OR10G7Q8NGN6 311 aa9.43□□□□□ -0.9
PNKP-218ENST00000625299 A0A0D9SG52 128 aa9.42□□□□□ -0.9
PNKP-218ENST00000625299 ANGP03950 147 aaKnown RBP9.42□□□□□ -0.9
PNKP-218ENST00000625299 PRSS1P07477 247 aa9.42□□□□□ -0.9
PNKP-218ENST00000625299 PPP1R1CQ8WVI7 109 aa9.42□□□□□ -0.9
PNKP-218ENST00000625299 B4DEV8 164 aa9.41□□□□□ -0.9
PNKP-218ENST00000625299 CDC34P49427 236 aaPredicted RBP9.41□□□□□ -0.9
PNKP-218ENST00000625299 SUMO1P63165 101 aaKnown RBP9.41□□□□□ -0.9
PNKP-218ENST00000625299 RPL36AP83881 106 aaKnown RBP9.41□□□□□ -0.9
PNKP-218ENST00000625299 CYCSP99999 105 aaKnown RBP9.41□□□□□ -0.9
PNKP-218ENST00000625299 SAPCD1Q5SSQ6 148 aa9.41□□□□□ -0.9
PNKP-218ENST00000625299 DGAT2L7PQ6IED9 249 aa9.41□□□□□ -0.9
PNKP-218ENST00000625299 C9orf163Q8N9P6 203 aa9.41□□□□□ -0.9
PNKP-218ENST00000625299 OR11H4Q8NGC9 324 aa9.41□□□□□ -0.9
PNKP-218ENST00000625299 RPL36ALQ969Q0 106 aaKnown RBP9.41□□□□□ -0.9
PNKP-218ENST00000625299 DPH3P1Q9H4G8 78 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 90.8 ms