RNA–Protein interactions for RNA: ENST00000625275.2

R3HCC1-210, Transcript of R3H domain and coiled-coil containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene R3HCC1, Length 1,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1-210ENST00000625275 F8W036 122 aa14.12□□□□□ -0.15
R3HCC1-210ENST00000625275 ERVFC1-1P60608 527 aa14.12□□□□□ -0.15
R3HCC1-210ENST00000625275 FAM222AQ5U5X8 452 aa14.12□□□□□ -0.15
R3HCC1-210ENST00000625275 FAM231DQ6ZW35 169 aa14.12□□□□□ -0.15
R3HCC1-210ENST00000625275 OR2D3Q8NGH3 330 aa14.12□□□□□ -0.15
R3HCC1-210ENST00000625275 DKK2Q9UBU2 259 aa14.12□□□□□ -0.15
R3HCC1-210ENST00000625275 NACAE9PAV3 2078 aa14.11□□□□□ -0.15
R3HCC1-210ENST00000625275 RNASE3P12724 160 aaKnown RBP14.11□□□□□ -0.15
R3HCC1-210ENST00000625275 ASIPP42127 132 aa14.11□□□□□ -0.15
R3HCC1-210ENST00000625275 DAZ2Q13117 558 aaKnown RBP14.11□□□□□ -0.15
R3HCC1-210ENST00000625275 SEC11CQ9BY50 192 aa14.11□□□□□ -0.15
R3HCC1-210ENST00000625275 DNLZQ5SXM8 178 aa14.1□□□□□ -0.15
R3HCC1-210ENST00000625275 SLC7A5P1Q8MH63 180 aa14.1□□□□□ -0.15
R3HCC1-210ENST00000625275 C9orf85Q96MD7 179 aa14.1□□□□□ -0.15
R3HCC1-210ENST00000625275 RPP21Q9H633 154 aaKnown RBP14.1□□□□□ -0.15
R3HCC1-210ENST00000625275 MUC4Q99102 2169 aa14.1□□□□□ -0.15
R3HCC1-210ENST00000625275 H3BVH4 76 aa14.09□□□□□ -0.15
R3HCC1-210ENST00000625275 P0DMU3 169 aa14.09□□□□□ -0.15
R3HCC1-210ENST00000625275 FAM231AP0DMU4 169 aa14.09□□□□□ -0.15
R3HCC1-210ENST00000625275 FAM231CP0DMU5 169 aa14.09□□□□□ -0.15
R3HCC1-210ENST00000625275 S100A4P26447 101 aaKnown RBP14.09□□□□□ -0.15
R3HCC1-210ENST00000625275 SFRP2Q96HF1 295 aa14.09□□□□□ -0.15
R3HCC1-210ENST00000625275 OSTCQ9NRP0 149 aa14.09□□□□□ -0.15
R3HCC1-210ENST00000625275 LYRM9A8MSI8 78 aa14.08□□□□□ -0.16
R3HCC1-210ENST00000625275 CXCL1P09341 107 aa14.08□□□□□ -0.16
R3HCC1-210ENST00000625275 GZMBP10144 247 aa14.08□□□□□ -0.16
R3HCC1-210ENST00000625275 PNRC1Q12796 327 aaPredicted RBP14.08□□□□□ -0.16
R3HCC1-210ENST00000625275 IL36BQ9NZH7 164 aa14.08□□□□□ -0.16
R3HCC1-210ENST00000625275 GATCO43716 136 aaKnown RBP14.07□□□□□ -0.16
R3HCC1-210ENST00000625275 SPINK4O60575 86 aa14.07□□□□□ -0.16
R3HCC1-210ENST00000625275 RPS20P60866 119 aaKnown RBP14.07□□□□□ -0.16
R3HCC1-210ENST00000625275 C10orf91Q5T1B1 145 aa14.07□□□□□ -0.16
R3HCC1-210ENST00000625275 Q6ZTI0 123 aa14.07□□□□□ -0.16
R3HCC1-210ENST00000625275 POM121L12Q8N7R1 296 aa14.07□□□□□ -0.16
R3HCC1-210ENST00000625275 SPXQ9BT56 116 aa14.07□□□□□ -0.16
R3HCC1-210ENST00000625275 ARMS2P0C7Q2 107 aa14.06□□□□□ -0.16
R3HCC1-210ENST00000625275 C15orf54Q8N8G6 183 aa14.06□□□□□ -0.16
R3HCC1-210ENST00000625275 FAM210BQ96KR6 192 aa14.06□□□□□ -0.16
R3HCC1-210ENST00000625275 MRPL16Q9NX20 251 aaKnown RBP14.06□□□□□ -0.16
R3HCC1-210ENST00000625275 TRGV1A0A0A0MS02 117 aa14.06□□□□□ -0.16
R3HCC1-210ENST00000625275 XKRY2A2RUG3 117 aa14.06□□□□□ -0.16
R3HCC1-210ENST00000625275 NDUFA5Q16718 116 aa14.06□□□□□ -0.16
R3HCC1-210ENST00000625275 LINC00612Q8N6U2 182 aa14.06□□□□□ -0.16
R3HCC1-210ENST00000625275 SCRT2Q9NQ03 307 aa14.06□□□□□ -0.16
R3HCC1-210ENST00000625275 V9GYV3 84 aa14.06□□□□□ -0.16
R3HCC1-210ENST00000625275 M0R2P5 195 aa14.05□□□□□ -0.16
R3HCC1-210ENST00000625275 DEFB130BP0DP73 79 aa14.05□□□□□ -0.16
R3HCC1-210ENST00000625275 DEFB130AP0DP74 79 aa14.05□□□□□ -0.16
R3HCC1-210ENST00000625275 LGALS9BQ3B8N2 356 aa14.05□□□□□ -0.16
R3HCC1-210ENST00000625275 CT83Q5H943 113 aa14.05□□□□□ -0.16
R3HCC1-210ENST00000625275 OR10G8Q8NGN5 311 aa14.05□□□□□ -0.16
R3HCC1-210ENST00000625275 CARHSP1Q9Y2V2 147 aaKnown RBP14.05□□□□□ -0.16
R3HCC1-210ENST00000625275 GAGE12BA1L429 117 aa14.04□□□□□ -0.16
R3HCC1-210ENST00000625275 GAGE7O76087 117 aa14.04□□□□□ -0.16
R3HCC1-210ENST00000625275 IGLC6P0CF74 106 aa14.04□□□□□ -0.16
R3HCC1-210ENST00000625275 GAGE12FP0CL80 117 aa14.04□□□□□ -0.16
R3HCC1-210ENST00000625275 GAGE12GP0CL81 117 aa14.04□□□□□ -0.16
R3HCC1-210ENST00000625275 GAGE12IP0CL82 117 aa14.04□□□□□ -0.16
R3HCC1-210ENST00000625275 MED14OSP0DP75 135 aa14.04□□□□□ -0.16
R3HCC1-210ENST00000625275 SSBP4Q9BWG4 385 aaPredicted RBP14.04□□□□□ -0.16
R3HCC1-210ENST00000625275 HECTD4Q9Y4D8 3996 aa14.04□□□□□ -0.16
R3HCC1-210ENST00000625275 OR5AL1P0C617 328 aa14.03□□□□□ -0.16
R3HCC1-210ENST00000625275 HTN3P15516 51 aa14.03□□□□□ -0.16
R3HCC1-210ENST00000625275 DAD1P61803 113 aa14.03□□□□□ -0.16
R3HCC1-210ENST00000625275 FER1L6-AS1Q8NA97 138 aa14.03□□□□□ -0.16
R3HCC1-210ENST00000625275 RASL10AQ92737 203 aa14.03□□□□□ -0.16
R3HCC1-210ENST00000625275 A8MWL6 223 aa14.02□□□□□ -0.16
R3HCC1-210ENST00000625275 SNAI2O43623 268 aa14.02□□□□□ -0.16
R3HCC1-210ENST00000625275 ZNF876PQ49A33 203 aa14.02□□□□□ -0.16
R3HCC1-210ENST00000625275 GTSF1Q8WW33 167 aa14.02□□□□□ -0.16
R3HCC1-210ENST00000625275 TPPP3Q9BW30 176 aa14.02□□□□□ -0.16
R3HCC1-210ENST00000625275 PHLDA3Q9Y5J5 127 aa14.02□□□□□ -0.16
R3HCC1-210ENST00000625275 LINC00336Q6ZUF6 198 aa14.01□□□□□ -0.17
R3HCC1-210ENST00000625275 OR10AG1Q8NH19 301 aa14.01□□□□□ -0.17
R3HCC1-210ENST00000625275 MUC21A0A0G2JKD1 596 aa14□□□□□ -0.17
R3HCC1-210ENST00000625275 MUC21A0A140T8X8 626 aa14□□□□□ -0.17
R3HCC1-210ENST00000625275 RNF212Q495C1 297 aa14□□□□□ -0.17
R3HCC1-210ENST00000625275 UBE2DNLQ8IWF7 75 aa14□□□□□ -0.17
R3HCC1-210ENST00000625275 TSKUQ8WUA8 353 aa14□□□□□ -0.17
R3HCC1-210ENST00000625275 PTH2Q96A98 100 aa14□□□□□ -0.17
R3HCC1-210ENST00000625275 TRGV2A0A075B6R0 118 aa13.99□□□□□ -0.17
R3HCC1-210ENST00000625275 A0A1W2PPQ1 181 aa13.99□□□□□ -0.17
R3HCC1-210ENST00000625275 M0R381 172 aa13.99□□□□□ -0.17
R3HCC1-210ENST00000625275 DMRTA1Q5VZB9 504 aa13.99□□□□□ -0.17
R3HCC1-210ENST00000625275 MT-ND4LP03901 98 aa13.99□□□□□ -0.17
R3HCC1-210ENST00000625275 CTRLP40313 264 aa13.99□□□□□ -0.17
R3HCC1-210ENST00000625275 LYZL1Q6UWQ5 148 aa13.99□□□□□ -0.17
R3HCC1-210ENST00000625275 ZFP82Q8N141 532 aa13.99□□□□□ -0.17
R3HCC1-210ENST00000625275 C18orf15Q96N68 181 aa13.99□□□□□ -0.17
R3HCC1-210ENST00000625275 GFRA4Q9GZZ7 299 aa13.99□□□□□ -0.17
R3HCC1-210ENST00000625275 F2Z2F3 143 aa13.98□□□□□ -0.17
R3HCC1-210ENST00000625275 PPP1R2P9O14990 202 aa13.98□□□□□ -0.17
R3HCC1-210ENST00000625275 NXPH4O95158 308 aa13.98□□□□□ -0.17
R3HCC1-210ENST00000625275 APOC3P02656 99 aa13.98□□□□□ -0.17
R3HCC1-210ENST00000625275 TMEM88Q6PEY1 159 aa13.98□□□□□ -0.17
R3HCC1-210ENST00000625275 SYT8Q8NBV8 401 aa13.98□□□□□ -0.17
R3HCC1-210ENST00000625275 FAM231BA6NCW3 169 aa13.97□□□□□ -0.17
R3HCC1-210ENST00000625275 HIGD1CA8MV81 97 aa13.97□□□□□ -0.17
R3HCC1-210ENST00000625275 M0R2N4 97 aa13.97□□□□□ -0.17
R3HCC1-210ENST00000625275 FOXA3P55318 350 aaPredicted RBP13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms