RNA–Protein interactions for RNA: ENST00000613899.4

FAM228B-208, Transcript of family with sequence similarity 228 member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FAM228B, Length 1,238 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228B-208ENST00000613899 FAM74A7A6NL05 159 aa15.42■□□□□ 0.06
FAM228B-208ENST00000613899 MAP1LC3BQ9GZQ8 125 aa15.42■□□□□ 0.06
FAM228B-208ENST00000613899 TNFRSF18Q9Y5U5 241 aa15.42■□□□□ 0.06
FAM228B-208ENST00000613899 PGPEP1LA6NFU8 196 aa15.41■□□□□ 0.06
FAM228B-208ENST00000613899 FABP5P3A8MUU1 101 aa15.41■□□□□ 0.06
FAM228B-208ENST00000613899 S100A4P26447 101 aaKnown RBP15.41■□□□□ 0.06
FAM228B-208ENST00000613899 MAPKAPK5-AS1Q8N8E1 139 aa15.41■□□□□ 0.06
FAM228B-208ENST00000613899 BOLA1Q9Y3E2 137 aa15.41■□□□□ 0.06
FAM228B-208ENST00000613899 CRYGDP07320 174 aa15.4■□□□□ 0.06
FAM228B-208ENST00000613899 MGST1P10620 155 aaKnown RBP15.4■□□□□ 0.06
FAM228B-208ENST00000613899 ASIPP42127 132 aa15.4■□□□□ 0.06
FAM228B-208ENST00000613899 CYTL1Q9NRR1 136 aa15.4■□□□□ 0.06
FAM228B-208ENST00000613899 IGHV3-73A0A0B4J1V6 119 aa15.39■□□□□ 0.05
FAM228B-208ENST00000613899 IGKV3D-20A0A0C4DH25 116 aa15.39■□□□□ 0.05
FAM228B-208ENST00000613899 PIK3CD-AS1Q5SR53 167 aa15.39■□□□□ 0.05
FAM228B-208ENST00000613899 CDPF1Q6NVV7 123 aa15.39■□□□□ 0.05
FAM228B-208ENST00000613899 PGPEP1Q9NXJ5 209 aa15.39■□□□□ 0.05
FAM228B-208ENST00000613899 IGHV3-38A0A0C4DH36 116 aa15.38■□□□□ 0.05
FAM228B-208ENST00000613899 A8MWV9 139 aa15.38■□□□□ 0.05
FAM228B-208ENST00000613899 STOML3Q8TAV4 291 aa15.38■□□□□ 0.05
FAM228B-208ENST00000613899 TCEAL7Q9BRU2 100 aa15.38■□□□□ 0.05
FAM228B-208ENST00000613899 TRAV8-6A0A0B4J262 113 aa15.37■□□□□ 0.05
FAM228B-208ENST00000613899 UBE2G1P62253 170 aa15.37■□□□□ 0.05
FAM228B-208ENST00000613899 ZNF345Q14585 488 aa15.37■□□□□ 0.05
FAM228B-208ENST00000613899 FMC1Q96HJ9 113 aa15.37■□□□□ 0.05
FAM228B-208ENST00000613899 KRTAP4-5Q9BYR2 181 aa15.37■□□□□ 0.05
FAM228B-208ENST00000613899 ZFP30Q9Y2G7 519 aa15.37■□□□□ 0.05
FAM228B-208ENST00000613899 ABCA13Q86UQ4 5058 aa15.37■□□□□ 0.05
FAM228B-208ENST00000613899 A0A087WTM6 91 aa15.36■□□□□ 0.05
FAM228B-208ENST00000613899 B4DEV8 164 aa15.36■□□□□ 0.05
FAM228B-208ENST00000613899 LINC01556Q5JQF7 62 aa15.36■□□□□ 0.05
FAM228B-208ENST00000613899 ZFP2Q6ZN57 461 aa15.36■□□□□ 0.05
FAM228B-208ENST00000613899 PARLQ9H300 379 aa15.36■□□□□ 0.05
FAM228B-208ENST00000613899 IL36BQ9NZH7 164 aa15.36■□□□□ 0.05
FAM228B-208ENST00000613899 SMLR1H3BR10 107 aa15.35■□□□□ 0.05
FAM228B-208ENST00000613899 FHITP49789 147 aa15.35■□□□□ 0.05
FAM228B-208ENST00000613899 LGALSLQ3ZCW2 172 aaPredicted RBP15.35■□□□□ 0.05
FAM228B-208ENST00000613899 OR10J3Q5JRS4 329 aa15.35■□□□□ 0.05
FAM228B-208ENST00000613899 COX8CQ7Z4L0 72 aa15.35■□□□□ 0.05
FAM228B-208ENST00000613899 ZC2HC1AQ96GY0 325 aa15.35■□□□□ 0.05
FAM228B-208ENST00000613899 DNAH5Q8TE73 4624 aa15.34■□□□□ 0.05
FAM228B-208ENST00000613899 LELP1Q5T871 98 aa15.34■□□□□ 0.05
FAM228B-208ENST00000613899 KCNRGQ8N5I3 272 aa15.34■□□□□ 0.05
FAM228B-208ENST00000613899 ATP6V0E2Q8NHE4 81 aa15.34■□□□□ 0.05
FAM228B-208ENST00000613899 GTSF1LQ9H1H1 148 aa15.34■□□□□ 0.05
FAM228B-208ENST00000613899 APOBP04114 4563 aaKnown RBP15.33■□□□□ 0.05
FAM228B-208ENST00000613899 H3BVH4 76 aa15.33■□□□□ 0.04
FAM228B-208ENST00000613899 DNLZQ5SXM8 178 aa15.33■□□□□ 0.04
FAM228B-208ENST00000613899 FAM162BQ5T6X4 162 aa15.33■□□□□ 0.04
FAM228B-208ENST00000613899 CST9LP1Q5W188 147 aa15.33■□□□□ 0.04
FAM228B-208ENST00000613899 Q8N1X5 172 aa15.33■□□□□ 0.04
FAM228B-208ENST00000613899 SYT8Q8NBV8 401 aa15.33■□□□□ 0.04
FAM228B-208ENST00000613899 TRBV6-1A0A0K0K1D8 114 aa15.32■□□□□ 0.04
FAM228B-208ENST00000613899 SH2D1AO60880 128 aa15.32■□□□□ 0.04
FAM228B-208ENST00000613899 SEC11BP0C7V7 166 aa15.32■□□□□ 0.04
FAM228B-208ENST00000613899 UMAD1C9J7I0 102 aa15.31■□□□□ 0.04
FAM228B-208ENST00000613899 KRBOX1C9JBD0 128 aa15.31■□□□□ 0.04
FAM228B-208ENST00000613899 M0R036 132 aa15.31■□□□□ 0.04
FAM228B-208ENST00000613899 AKR1C3P42330 323 aa15.31■□□□□ 0.04
FAM228B-208ENST00000613899 CRIP1P50238 77 aa15.31■□□□□ 0.04
FAM228B-208ENST00000613899 HMSDA8MTL9 139 aa15.3■□□□□ 0.04
FAM228B-208ENST00000613899 IBA57-AS1B1ANH7 110 aa15.3■□□□□ 0.04
FAM228B-208ENST00000613899 RHODO00212 210 aa15.3■□□□□ 0.04
FAM228B-208ENST00000613899 PSCAO43653 123 aa15.3■□□□□ 0.04
FAM228B-208ENST00000613899 LTAP01374 205 aa15.3■□□□□ 0.04
FAM228B-208ENST00000613899 OR11H4Q8NGC9 324 aa15.3■□□□□ 0.04
FAM228B-208ENST00000613899 A0A0D9SG52 128 aa15.29■□□□□ 0.04
FAM228B-208ENST00000613899 ARMS2P0C7Q2 107 aa15.29■□□□□ 0.04
FAM228B-208ENST00000613899 ZNF674Q2M3X9 581 aa15.29■□□□□ 0.04
FAM228B-208ENST00000613899 KANTRA0A1W2PQU2 76 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 GAGE12JA6NER3 117 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 BCL2L11O43521 198 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 PAGE4O60829 102 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 LINC00694P0DN24 101 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 FUSP35637 526 aaKnown RBP eCLIP15.28■□□□□ 0.04
FAM228B-208ENST00000613899 GAGE1Q13065 139 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 GAGE4Q13068 117 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 GAGE5Q13069 117 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 LINC01559Q495D7 138 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 GAGE13Q4V321 117 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 DMRTA1Q5VZB9 504 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 UFSP1Q6NVU6 142 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 Q6ZSN1 163 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 FAM213BQ8TBF2 198 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 SFT2D1Q8WV19 159 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 ZNF471Q9BX82 626 aaPredicted RBP15.28■□□□□ 0.04
FAM228B-208ENST00000613899 JPT2Q9H910 190 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 SCRT2Q9NQ03 307 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 PHLDA3Q9Y5J5 127 aa15.28■□□□□ 0.04
FAM228B-208ENST00000613899 GRIFINA4D1Z8 144 aa15.27■□□□□ 0.04
FAM228B-208ENST00000613899 IGHV3-30P01768 117 aa15.27■□□□□ 0.04
FAM228B-208ENST00000613899 IGHV3-33P01772 117 aa15.27■□□□□ 0.04
FAM228B-208ENST00000613899 IGHV3-30-3P0DP02 117 aa15.27■□□□□ 0.04
FAM228B-208ENST00000613899 IGHV3-30-5P0DP03 117 aa15.27■□□□□ 0.04
FAM228B-208ENST00000613899 TPT1P13693 172 aaKnown RBP15.27■□□□□ 0.04
FAM228B-208ENST00000613899 MBD3L1Q8WWY6 194 aa15.27■□□□□ 0.04
FAM228B-208ENST00000613899 PFDN1O60925 122 aa15.26■□□□□ 0.03
FAM228B-208ENST00000613899 S100A9P06702 114 aaKnown RBP15.26■□□□□ 0.03
FAM228B-208ENST00000613899 EIF5AP63241 154 aaKnown RBP15.26■□□□□ 0.03
FAM228B-208ENST00000613899 LAGE3Q14657 143 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 1674 ms