RNA–Protein interactions for RNA: ENST00000608532.1

HDDC2-207, Transcript of HD domain containing 2, humanhuman

TSL 3

Gene HDDC2, Length 553 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-207ENST00000608532 PARP14Q460N5 1801 aa-0.67□□□□□ -2.52
HDDC2-207ENST00000608532 PRKDCP78527 4128 aaKnown RBP-0.67□□□□□ -2.52
HDDC2-207ENST00000608532 ARHGAP31Q2M1Z3 1444 aa-0.67□□□□□ -2.52
HDDC2-207ENST00000608532 NRXN2Q9P2S2 1712 aa-0.67□□□□□ -2.52
HDDC2-207ENST00000608532 ARAP1Q96P48 1450 aa-0.67□□□□□ -2.52
HDDC2-207ENST00000608532 PPRC1Q5VV67 1664 aaKnown RBP-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 TRAV13-1A0A0B4J241 112 aa-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 M0QZK8 103 aa-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 OR2H2O95918 312 aa-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 TMEM78Q5T7P6 136 aa-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 FAM24BQ8N5W8 94 aa-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 DYDC1Q8WWB3 177 aa-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 Q96NJ1 140 aa-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 YTHDC2Q9H6S0 1430 aaKnown RBP-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 NHSL1Q5SYE7 1610 aa-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 GOLGA3Q08378 1498 aa-0.68□□□□□ -2.52
HDDC2-207ENST00000608532 TEX49A0A1B0GTD5 131 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 TMEM238C9JI98 176 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 H3BMG7 143 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 HBDP02042 147 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 S100A6P06703 90 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 RPL7P18124 248 aaKnown RBP-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 POLR2HP52434 150 aaKnown RBP-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 UNQ5815/PRO19632Q6UWF5 114 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 AP3S1Q92572 193 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 CHMP6Q96FZ7 201 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 TMEM141Q96I45 108 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 SMIM7Q9BQ49 75 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 NDUFAF1Q9Y375 327 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 MED31Q9Y3C7 131 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 MAP1BP46821 2468 aaKnown RBP-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 MAP1AP78559 2803 aaPredicted RBP-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 APC2O95996 2303 aa-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 KIAA0100Q14667 2235 aaKnown RBP-0.69□□□□□ -2.52
HDDC2-207ENST00000608532 PLCE1Q9P212 2302 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 TRAV12-2A0A075B6T6 113 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 TRAV16A0A0A6YYK6 109 aaPredicted RBP-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 IGHV1-24A0A0C4DH33 117 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 A0A1B0GW64 132 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 A0A1W2PRE2 83 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 MAP1LC3B2A6NCE7 125 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 PPP5D1E7EU14 171 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 APOC1P02654 83 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 APODP05090 189 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 SLC25A5P05141 298 aaKnown RBP-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 SERPINB1P30740 379 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 MRPS25P82663 173 aaKnown RBP-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 OR2T2Q6IF00 324 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 DCUN1D2Q6PH85 259 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 STX12Q86Y82 276 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 STX19Q8N4C7 294 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 SMIM11BQ8TCY0 68 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 BRK1Q8WUW1 75 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 LAMTOR3Q9UHA4 124 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 TRAPPC2LQ9UL33 140 aa-0.7□□□□□ -2.52
HDDC2-207ENST00000608532 A2MP01023 1474 aa-0.71□□□□□ -2.52
HDDC2-207ENST00000608532 TRAV17A0A0B4J275 112 aa-0.71□□□□□ -2.52
HDDC2-207ENST00000608532 POLR2JP52435 117 aaKnown RBP-0.71□□□□□ -2.52
HDDC2-207ENST00000608532 NPC2P61916 151 aa-0.71□□□□□ -2.52
HDDC2-207ENST00000608532 THEM6Q8WUY1 208 aa-0.71□□□□□ -2.52
HDDC2-207ENST00000608532 BOLA2Q9H3K6 86 aa-0.71□□□□□ -2.52
HDDC2-207ENST00000608532 BET1LQ9NYM9 111 aa-0.71□□□□□ -2.52
HDDC2-207ENST00000608532 PLXNB2O15031 1838 aa-0.71□□□□□ -2.52
HDDC2-207ENST00000608532 LAMC1P11047 1609 aa-0.71□□□□□ -2.52
HDDC2-207ENST00000608532 SPTBN1Q01082 2364 aaKnown RBP-0.71□□□□□ -2.52
HDDC2-207ENST00000608532 CSPG4Q6UVK1 2322 aa-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 WNK1Q9H4A3 2382 aa-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 ZNF670-ZNF695F2Z2N8 137 aa-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 CCL3L1P16619 93 aa-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 CKS2P33552 79 aa-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 RPL22P35268 128 aaKnown RBP-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 TCTAP57738 103 aa-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 C3orf33Q6P1S2 294 aa-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 TMED4Q7Z7H5 227 aa-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 LXNQ9BS40 222 aa-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 GID8Q9NWU2 228 aa-0.72□□□□□ -2.52
HDDC2-207ENST00000608532 MYH13Q9UKX3 1938 aa-0.72□□□□□ -2.53
HDDC2-207ENST00000608532 HERC1Q15751 4861 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 G3V318 75 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 E2F6O75461 281 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 TCRAP04437 139 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 G0S2P27469 103 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 DEFB109BQ30KR1 87 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 CYP4F30PQ9H0H9 118 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 STOML2Q9UJZ1 356 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 LAMTOR2Q9Y2Q5 125 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 PIEZO2Q9H5I5 2752 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 PBRM1Q86U86 1689 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 IFT172Q9UG01 1749 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 MED23Q9ULK4 1368 aa-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 KMT2CQ8NEZ4 4911 aaKnown RBP-0.73□□□□□ -2.53
HDDC2-207ENST00000608532 PKHD1P08F94 4074 aa-0.74□□□□□ -2.53
HDDC2-207ENST00000608532 FLGP20930 4061 aaPredicted RBP-0.74□□□□□ -2.53
HDDC2-207ENST00000608532 ZNF815PA8K554 130 aa-0.74□□□□□ -2.53
HDDC2-207ENST00000608532 UQCRQO14949 82 aa-0.74□□□□□ -2.53
HDDC2-207ENST00000608532 IFNA21P01568 189 aa-0.74□□□□□ -2.53
HDDC2-207ENST00000608532 SLC25A6P12236 298 aa-0.74□□□□□ -2.53
HDDC2-207ENST00000608532 SRP9P49458 86 aaKnown RBP-0.74□□□□□ -2.53
HDDC2-207ENST00000608532 AKR1D1P51857 326 aa-0.74□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms