RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 C22orf46C9J442 243 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 Q9H8V8 135 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 K7EN84 100 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 VOPP1Q96AW1 172 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 COL4A6Q14031 1691 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 FUSP35637 526 aaKnown RBP eCLIP7.62□□□□□ -1.19
CSMD1-217ENST00000602723 C17orf58Q2M2W7 97 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 C1orf43Q9BWL3 253 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 IGHV7-4-1A0A0J9YVY3 117 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 IGKV1-39P01597 117 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 IGKV1D-39P04432 117 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 IGF2BP2-AS1Q96M15 143 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP7.62□□□□□ -1.19
CSMD1-217ENST00000602723 NTN5Q8WTR8 489 aaPredicted RBP7.62□□□□□ -1.19
CSMD1-217ENST00000602723 MRPL53Q96EL3 112 aaKnown RBP7.62□□□□□ -1.19
CSMD1-217ENST00000602723 CFC1BP0CG36 223 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 CFC1P0CG37 223 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 ADAMTS20P59510 1910 aa7.62□□□□□ -1.19
CSMD1-217ENST00000602723 ACYP1P07311 99 aa7.61□□□□□ -1.19
CSMD1-217ENST00000602723 C17orf82Q86X59 251 aaPredicted RBP7.61□□□□□ -1.19
CSMD1-217ENST00000602723 RNF223E7ERA6 249 aa7.61□□□□□ -1.19
CSMD1-217ENST00000602723 KIR2DL5BA0A0G2JN68 375 aa7.61□□□□□ -1.19
CSMD1-217ENST00000602723 KIR2DL5BA0A0G2JPC4 375 aa7.61□□□□□ -1.19
CSMD1-217ENST00000602723 KIR2DL5AQ8N109 375 aa7.61□□□□□ -1.19
CSMD1-217ENST00000602723 DEFB105AQ8NG35 78 aa7.61□□□□□ -1.19
CSMD1-217ENST00000602723 TPSG1Q9NRR2 321 aa7.61□□□□□ -1.19
CSMD1-217ENST00000602723 F6UB75 175 aa7.61□□□□□ -1.19
CSMD1-217ENST00000602723 CR1LQ2VPA4 569 aa7.6□□□□□ -1.19
CSMD1-217ENST00000602723 J3KT08 172 aa7.6□□□□□ -1.19
CSMD1-217ENST00000602723 NDUFC2O95298 119 aa7.6□□□□□ -1.19
CSMD1-217ENST00000602723 C15orf65H3BRN8 121 aa7.6□□□□□ -1.19
CSMD1-217ENST00000602723 IGLC1P0CG04 106 aa7.6□□□□□ -1.19
CSMD1-217ENST00000602723 IGLC7A0M8Q6 106 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 ICOSQ9Y6W8 199 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 LHBP01229 141 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 UBE2BP63146 152 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 LINC00311Q8N616 119 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 IGHV4-4A0A075B6R2 117 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 FAM120AOSQ5T036 256 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 NOP10Q9NPE3 64 aaKnown RBP7.59□□□□□ -1.19
CSMD1-217ENST00000602723 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.59□□□□□ -1.19
CSMD1-217ENST00000602723 IGKV2-29A2NJV5 120 aaPredicted RBP7.59□□□□□ -1.19
CSMD1-217ENST00000602723 DYNAPQ8N1N2 210 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 USP24Q9UPU5 2620 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 E9PQ18 207 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 ATOX1O00244 68 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 C1orf147Q96MC9 270 aaPredicted RBP7.59□□□□□ -1.19
CSMD1-217ENST00000602723 ZNF747Q9BV97 191 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 DEFB125Q8N687 156 aa7.59□□□□□ -1.19
CSMD1-217ENST00000602723 A0A096LPF7 62 aa7.59□□□□□ -1.2
CSMD1-217ENST00000602723 CHKB-CPT1BH3BT56 60 aa7.59□□□□□ -1.2
CSMD1-217ENST00000602723 Q6ZS92 163 aa7.59□□□□□ -1.2
CSMD1-217ENST00000602723 WDR86Q86TI4 376 aa7.59□□□□□ -1.2
CSMD1-217ENST00000602723 A0A1B0GX51 115 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 RBAKDNA6NC62 111 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 FOXE3Q13461 319 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 FOXI2Q6ZQN5 318 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 K7EM74 188 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 MAPK1IP1LQ8NDC0 245 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 TEX48A0A1B0GUV7 120 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 MP68P56378 58 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 CDPF1Q6NVV7 123 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 Q6ZVH6 145 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 SMIM20Q8N5G0 67 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 FAM236AA0A1B0GUQ0 79 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 FAM236BA0A1B0GV22 79 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 LOXP28300 417 aaPredicted RBP7.58□□□□□ -1.2
CSMD1-217ENST00000602723 WFDC9Q8NEX5 89 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 COX7B2Q8TF08 81 aa7.58□□□□□ -1.2
CSMD1-217ENST00000602723 HERV-K104P63124 156 aa7.57□□□□□ -1.2
CSMD1-217ENST00000602723 SH2D6Q7Z4S9 175 aa7.57□□□□□ -1.2
CSMD1-217ENST00000602723 KLF2Q9Y5W3 355 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-217ENST00000602723 IGLL5B9A064 214 aa7.57□□□□□ -1.2
CSMD1-217ENST00000602723 PRB2P02812 416 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-217ENST00000602723 RPL18AQ02543 176 aaKnown RBP7.57□□□□□ -1.2
CSMD1-217ENST00000602723 DUX4L9Q6RFH8 374 aaPredicted RBP7.57□□□□□ -1.2
CSMD1-217ENST00000602723 TEN1Q86WV5 123 aa7.57□□□□□ -1.2
CSMD1-217ENST00000602723 TRAV4A0A0B4J268 109 aa7.57□□□□□ -1.2
CSMD1-217ENST00000602723 ZFP2Q6ZN57 461 aa7.57□□□□□ -1.2
CSMD1-217ENST00000602723 CRIPAKQ8N1N5 446 aa7.57□□□□□ -1.2
CSMD1-217ENST00000602723 GNRH2O43555 120 aa7.57□□□□□ -1.2
CSMD1-217ENST00000602723 RPL39LQ96EH5 51 aaKnown RBP7.57□□□□□ -1.2
CSMD1-217ENST00000602723 IGKV3D-7A0A0C4DH55 119 aa7.56□□□□□ -1.2
CSMD1-217ENST00000602723 DKK4Q9UBT3 224 aa7.56□□□□□ -1.2
CSMD1-217ENST00000602723 ETDCA0A1B0GVM5 59 aa7.56□□□□□ -1.2
CSMD1-217ENST00000602723 PRR30Q53SZ7 412 aaPredicted RBP7.56□□□□□ -1.2
CSMD1-217ENST00000602723 Q6ZQT7 251 aa7.56□□□□□ -1.2
CSMD1-217ENST00000602723 Q6ZR03 302 aa7.56□□□□□ -1.2
CSMD1-217ENST00000602723 IGLV3-9A0A075B6K5 115 aa7.56□□□□□ -1.2
CSMD1-217ENST00000602723 PKIGQ9Y2B9 76 aa7.56□□□□□ -1.2
CSMD1-217ENST00000602723 IGKV2D-24A0A075B6R9 120 aa7.56□□□□□ -1.2
CSMD1-217ENST00000602723 IGHV4-28A0A0C4DH34 117 aa7.56□□□□□ -1.2
CSMD1-217ENST00000602723 IGKV1OR2-108A0A075B7D4 117 aa7.55□□□□□ -1.2
CSMD1-217ENST00000602723 H3BQ85 93 aa7.55□□□□□ -1.2
CSMD1-217ENST00000602723 LYPD6BQ8NI32 183 aa7.55□□□□□ -1.2
CSMD1-217ENST00000602723 CEP295Q9C0D2 2601 aa7.55□□□□□ -1.2
CSMD1-217ENST00000602723 A0A0B4J2C4 111 aa7.55□□□□□ -1.2
CSMD1-217ENST00000602723 U3KQE9 123 aa7.55□□□□□ -1.2
CSMD1-217ENST00000602723 HOXB4P17483 251 aaPredicted RBP7.55□□□□□ -1.2
CSMD1-217ENST00000602723 POU2AF1Q16633 256 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 174.9 ms