RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 IGLV1-51P01701 117 aa12.9□□□□□ -0.34
PPFIA3-207ENST00000602716 TPPP3Q9BW30 176 aa12.9□□□□□ -0.34
PPFIA3-207ENST00000602716 hDV102S1A0JD36 115 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 SH2D1AO60880 128 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 ID1P41134 155 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 PCP4P48539 62 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 HIST1H1AQ02539 215 aaPredicted RBP12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 OR8A1Q8NGG7 326 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 AP5S1Q9NUS5 200 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 STAB1Q9NY15 2570 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 TMEM189A5PLL7 270 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 RBAKDNA6NC62 111 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 LYZL1Q6UWQ5 148 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 C3orf56Q8N813 242 aa12.89□□□□□ -0.35
PPFIA3-207ENST00000602716 DEFB131AP59861 70 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 SNRPD3P62318 126 aaKnown RBP12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 C12orf54Q6X4T0 127 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 ORAOV1Q8WV07 137 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 PRR25Q96S07 402 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 SPAG8Q99932 426 aaPredicted RBP12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 U3KQK5 164 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 ODF3L2Q3SX64 289 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 SAPCD1Q5SSQ6 148 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 PRR9Q5T870 116 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 LINC01545Q5VT33 79 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 SAMD13Q5VXD3 122 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 C9orf47Q6ZRZ4 202 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 TMEM158Q8WZ71 300 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 MAP6D1Q9H9H5 199 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 TP73-AS1Q9UF72 201 aa12.88□□□□□ -0.35
PPFIA3-207ENST00000602716 FBLL1A6NHQ2 334 aaKnown RBP12.87□□□□□ -0.35
PPFIA3-207ENST00000602716 KNCNA6PVL3 124 aa12.87□□□□□ -0.35
PPFIA3-207ENST00000602716 ZNF80P51504 273 aaPredicted RBP12.87□□□□□ -0.35
PPFIA3-207ENST00000602716 FA2HQ7L5A8 372 aa12.87□□□□□ -0.35
PPFIA3-207ENST00000602716 TMSB15BA0A087X1C1 80 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 TRAV2A0A0B4J234 112 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 HSBP1L1C9JCN9 74 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 TMEM78Q5T7P6 136 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 Q6ZQT7 251 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 PRSS3P2Q8NHM4 247 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 TRAV25A0A0B4J276 109 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 KIR3DS1Q14943 382 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 FAM104BQ5XKR9 115 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 APRG1Q8IVJ8 170 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 OR10J6PQ8NGY7 276 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 OR10AG1Q8NH19 301 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 MCRIP2Q9BUT9 160 aaKnown RBP12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 SCRT2Q9NQ03 307 aa12.86□□□□□ -0.35
PPFIA3-207ENST00000602716 COL6A5A8TX70 2615 aa12.85□□□□□ -0.35
PPFIA3-207ENST00000602716 A0A0J9YX75 114 aa12.85□□□□□ -0.35
PPFIA3-207ENST00000602716 D6R8Y8 96 aa12.85□□□□□ -0.35
PPFIA3-207ENST00000602716 J3KRW8 73 aa12.85□□□□□ -0.35
PPFIA3-207ENST00000602716 IGKV3-20P01619 116 aa12.85□□□□□ -0.35
PPFIA3-207ENST00000602716 SLC25A34Q6PIV7 304 aa12.85□□□□□ -0.35
PPFIA3-207ENST00000602716 COX11Q9Y6N1 276 aa12.85□□□□□ -0.35
PPFIA3-207ENST00000602716 IFI27P40305 119 aaPredicted RBP12.84□□□□□ -0.35
PPFIA3-207ENST00000602716 WFDC10AQ9H1F0 79 aa12.84□□□□□ -0.35
PPFIA3-207ENST00000602716 H0Y8G0 127 aa12.84□□□□□ -0.35
PPFIA3-207ENST00000602716 CD7P09564 240 aa12.84□□□□□ -0.35
PPFIA3-207ENST00000602716 SHISA2Q6UWI4 295 aa12.84□□□□□ -0.35
PPFIA3-207ENST00000602716 AMN1Q8IY45 258 aa12.84□□□□□ -0.35
PPFIA3-207ENST00000602716 TIMM8BQ9Y5J9 83 aaPredicted RBP12.84□□□□□ -0.35
PPFIA3-207ENST00000602716 SORL1Q92673 2214 aa12.83□□□□□ -0.35
PPFIA3-207ENST00000602716 A0A096LNJ9 63 aa12.83□□□□□ -0.36
PPFIA3-207ENST00000602716 RPS20P60866 119 aaKnown RBP12.83□□□□□ -0.36
PPFIA3-207ENST00000602716 Q6ZVH6 145 aa12.83□□□□□ -0.36
PPFIA3-207ENST00000602716 ZFAND2AQ8N6M9 145 aa12.83□□□□□ -0.36
PPFIA3-207ENST00000602716 PRELID3AQ96N28 172 aa12.83□□□□□ -0.36
PPFIA3-207ENST00000602716 ORMDL3Q8N138 153 aa12.83□□□□□ -0.36
PPFIA3-207ENST00000602716 FAM19A4Q96LR4 140 aa12.83□□□□□ -0.36
PPFIA3-207ENST00000602716 MDFIQ99750 246 aa12.83□□□□□ -0.36
PPFIA3-207ENST00000602716 RBMY1BA6NDE4 496 aaKnown RBP12.82□□□□□ -0.36
PPFIA3-207ENST00000602716 RBMY1EA6NEQ0 496 aaKnown RBP12.82□□□□□ -0.36
PPFIA3-207ENST00000602716 NCR2O95944 276 aa12.82□□□□□ -0.36
PPFIA3-207ENST00000602716 RBMY1DP0C7P1 496 aaKnown RBP12.82□□□□□ -0.36
PPFIA3-207ENST00000602716 IGLC6P0CF74 106 aa12.82□□□□□ -0.36
PPFIA3-207ENST00000602716 MRPL51Q4U2R6 128 aaKnown RBP12.82□□□□□ -0.36
PPFIA3-207ENST00000602716 ZNF575Q86XF7 245 aa12.82□□□□□ -0.36
PPFIA3-207ENST00000602716 PMCHL2Q9BQD1 86 aa12.82□□□□□ -0.36
PPFIA3-207ENST00000602716 ANK2Q01484 3957 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 MPV17L2Q567V2 206 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 FOXI2Q6ZQN5 318 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 FER1L6-AS1Q8NA97 138 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 MUC21A0A0G2JKD1 596 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 MUC21A0A140T8X8 626 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 LOC389332A0A1B0GUA5 103 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 C21orf62-AS1Q17RA5 79 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 BEAN1Q3B7T3 259 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 MUC21Q5SSG8 566 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 LINC00477Q96M19 166 aa12.81□□□□□ -0.36
PPFIA3-207ENST00000602716 CCL25O15444 150 aa12.8□□□□□ -0.36
PPFIA3-207ENST00000602716 C9orf66Q5T8R8 295 aa12.8□□□□□ -0.36
PPFIA3-207ENST00000602716 AMTNQ6UX39 209 aa12.8□□□□□ -0.36
PPFIA3-207ENST00000602716 WFDC9Q8NEX5 89 aa12.8□□□□□ -0.36
PPFIA3-207ENST00000602716 OR2K2Q8NGT1 345 aa12.8□□□□□ -0.36
PPFIA3-207ENST00000602716 C19orf73Q9NVV2 129 aa12.8□□□□□ -0.36
PPFIA3-207ENST00000602716 NOTCH3Q9UM47 2321 aa12.8□□□□□ -0.36
PPFIA3-207ENST00000602716 AGRNO00468 2067 aa12.79□□□□□ -0.36
PPFIA3-207ENST00000602716 HLA-DRB4P13762 266 aa12.79□□□□□ -0.36
PPFIA3-207ENST00000602716 BVES-AS1Q5T3Y7 98 aa12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms