RNA–Protein interactions for RNA: ENST00000601319.1

HERC3-214, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 2

Gene HERC3, Length 1,298 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-214ENST00000601319 BTF3P20290 206 aaKnown RBP11.82□□□□□ -0.52
HERC3-214ENST00000601319 DNLZQ5SXM8 178 aa11.82□□□□□ -0.52
HERC3-214ENST00000601319 NEGR1Q7Z3B1 354 aa11.82□□□□□ -0.52
HERC3-214ENST00000601319 PCNPQ8WW12 178 aaKnown RBP11.82□□□□□ -0.52
HERC3-214ENST00000601319 RS1O15537 224 aa11.81□□□□□ -0.52
HERC3-214ENST00000601319 S100A9P06702 114 aaKnown RBP11.81□□□□□ -0.52
HERC3-214ENST00000601319 GATA1P15976 413 aaPredicted RBP11.81□□□□□ -0.52
HERC3-214ENST00000601319 SRIP30626 198 aa11.81□□□□□ -0.52
HERC3-214ENST00000601319 ASIPP42127 132 aa11.81□□□□□ -0.52
HERC3-214ENST00000601319 CRIP1P50238 77 aa11.81□□□□□ -0.52
HERC3-214ENST00000601319 ZNF506Q5JVG8 444 aa11.81□□□□□ -0.52
HERC3-214ENST00000601319 FAM162BQ5T6X4 162 aa11.81□□□□□ -0.52
HERC3-214ENST00000601319 CFAP126Q5VTH2 177 aa11.81□□□□□ -0.52
HERC3-214ENST00000601319 KRTAP1-5Q9BYS1 174 aa11.81□□□□□ -0.52
HERC3-214ENST00000601319 MANBALQ9NQG1 85 aa11.81□□□□□ -0.52
HERC3-214ENST00000601319 IL36BQ9NZH7 164 aa11.81□□□□□ -0.52
HERC3-214ENST00000601319 A0A1B0GV50 99 aa11.8□□□□□ -0.52
HERC3-214ENST00000601319 SH2D1AO60880 128 aa11.8□□□□□ -0.52
HERC3-214ENST00000601319 GYPEP15421 78 aa11.8□□□□□ -0.52
HERC3-214ENST00000601319 ZNF674Q2M3X9 581 aa11.8□□□□□ -0.52
HERC3-214ENST00000601319 LYPD5Q6UWN5 251 aa11.8□□□□□ -0.52
HERC3-214ENST00000601319 SH2D6Q7Z4S9 175 aa11.8□□□□□ -0.52
HERC3-214ENST00000601319 TXNDC17Q9BRA2 123 aa11.8□□□□□ -0.52
HERC3-214ENST00000601319 SCO2A0A1W2PP80 73 aa11.79□□□□□ -0.52
HERC3-214ENST00000601319 PGPEP1LA6NFU8 196 aa11.79□□□□□ -0.52
HERC3-214ENST00000601319 B4DEV8 164 aa11.79□□□□□ -0.52
HERC3-214ENST00000601319 KRBOX1C9JBD0 128 aa11.79□□□□□ -0.52
HERC3-214ENST00000601319 NXPH4O95158 308 aa11.79□□□□□ -0.52
HERC3-214ENST00000601319 S100A4P26447 101 aaKnown RBP11.79□□□□□ -0.52
HERC3-214ENST00000601319 SULT1A2P50226 295 aa11.79□□□□□ -0.52
HERC3-214ENST00000601319 AKAP14Q86UN6 197 aa11.79□□□□□ -0.52
HERC3-214ENST00000601319 TRBV6-4A0A1B0GX49 114 aa11.78□□□□□ -0.52
HERC3-214ENST00000601319 SIVA1O15304 175 aa11.78□□□□□ -0.52
HERC3-214ENST00000601319 LINC01559Q495D7 138 aa11.78□□□□□ -0.52
HERC3-214ENST00000601319 SLC51BQ86UW2 128 aa11.78□□□□□ -0.52
HERC3-214ENST00000601319 A8MWV9 139 aa11.77□□□□□ -0.53
HERC3-214ENST00000601319 TEX46H3BTG2 121 aa11.77□□□□□ -0.53
HERC3-214ENST00000601319 TIRAPP58753 221 aa11.77□□□□□ -0.53
HERC3-214ENST00000601319 RHOHQ15669 191 aa11.77□□□□□ -0.53
HERC3-214ENST00000601319 ZFP2Q6ZN57 461 aa11.77□□□□□ -0.53
HERC3-214ENST00000601319 C11orf52Q96A22 123 aa11.77□□□□□ -0.53
HERC3-214ENST00000601319 H3BVH4 76 aa11.76□□□□□ -0.53
HERC3-214ENST00000601319 M0R036 132 aa11.76□□□□□ -0.53
HERC3-214ENST00000601319 MGST1P10620 155 aaKnown RBP11.76□□□□□ -0.53
HERC3-214ENST00000601319 SLC25A29Q8N8R3 303 aa11.76□□□□□ -0.53
HERC3-214ENST00000601319 MLST8Q9BVC4 326 aa11.76□□□□□ -0.53
HERC3-214ENST00000601319 LOC100131303A0A0U1RQF7 123 aa11.75□□□□□ -0.53
HERC3-214ENST00000601319 CCL20P78556 96 aa11.75□□□□□ -0.53
HERC3-214ENST00000601319 C9orf62Q8N4C0 152 aa11.75□□□□□ -0.53
HERC3-214ENST00000601319 PRADC1Q9BSG0 188 aa11.75□□□□□ -0.53
HERC3-214ENST00000601319 PARLQ9H300 379 aa11.75□□□□□ -0.53
HERC3-214ENST00000601319 SCRT2Q9NQ03 307 aa11.75□□□□□ -0.53
HERC3-214ENST00000601319 GNG13Q9P2W3 67 aa11.75□□□□□ -0.53
HERC3-214ENST00000601319 K7EP13 123 aa11.74□□□□□ -0.53
HERC3-214ENST00000601319 CXCL1P09341 107 aa11.74□□□□□ -0.53
HERC3-214ENST00000601319 ARMS2P0C7Q2 107 aa11.74□□□□□ -0.53
HERC3-214ENST00000601319 TNP2Q05952 138 aa11.74□□□□□ -0.53
HERC3-214ENST00000601319 ZNF575Q86XF7 245 aa11.74□□□□□ -0.53
HERC3-214ENST00000601319 NHLRC2Q8NBF2 726 aa11.74□□□□□ -0.53
HERC3-214ENST00000601319 SYT8Q8NBV8 401 aa11.74□□□□□ -0.53
HERC3-214ENST00000601319 MED14OSP0DP75 135 aa11.73□□□□□ -0.53
HERC3-214ENST00000601319 UFSP1Q6NVU6 142 aa11.73□□□□□ -0.53
HERC3-214ENST00000601319 BAGE2Q86Y30 109 aa11.73□□□□□ -0.53
HERC3-214ENST00000601319 hCG_2014768A0A024R1R8 64 aa11.72□□□□□ -0.53
HERC3-214ENST00000601319 GRIFINA4D1Z8 144 aa11.72□□□□□ -0.53
HERC3-214ENST00000601319 RHODO00212 210 aa11.72□□□□□ -0.53
HERC3-214ENST00000601319 DNAH10OSP0CZ25 163 aa11.72□□□□□ -0.53
HERC3-214ENST00000601319 RPL35P42766 123 aaKnown RBP11.72□□□□□ -0.53
HERC3-214ENST00000601319 WFDC10BQ8IUB3 73 aa11.72□□□□□ -0.53
HERC3-214ENST00000601319 IGHV3-73A0A0B4J1V6 119 aa11.71□□□□□ -0.53
HERC3-214ENST00000601319 IFNA1P01562 189 aa11.71□□□□□ -0.53
HERC3-214ENST00000601319 LINC00315P59091 139 aa11.71□□□□□ -0.53
HERC3-214ENST00000601319 MEF2BQ02080 365 aaPredicted RBP11.71□□□□□ -0.53
HERC3-214ENST00000601319 PHLDA3Q9Y5J5 127 aa11.71□□□□□ -0.53
HERC3-214ENST00000601319 LY96Q9Y6Y9 160 aa11.71□□□□□ -0.53
HERC3-214ENST00000601319 DNAH11Q96DT5 4516 aa11.7□□□□□ -0.54
HERC3-214ENST00000601319 TRAV9-2A0A087WT02 112 aa11.7□□□□□ -0.54
HERC3-214ENST00000601319 TMSB15BA0A087X1C1 80 aa11.7□□□□□ -0.54
HERC3-214ENST00000601319 PDE6DO43924 150 aa11.7□□□□□ -0.54
HERC3-214ENST00000601319 LINC00694P0DN24 101 aa11.7□□□□□ -0.54
HERC3-214ENST00000601319 TAGLN2P37802 199 aaKnown RBP11.7□□□□□ -0.54
HERC3-214ENST00000601319 Q6ZRN7 208 aaPredicted RBP11.7□□□□□ -0.54
HERC3-214ENST00000601319 ZFP82Q8N141 532 aa11.7□□□□□ -0.54
HERC3-214ENST00000601319 SMIM12Q96EX1 92 aa11.7□□□□□ -0.54
HERC3-214ENST00000601319 DERL1Q9BUN8 251 aa11.7□□□□□ -0.54
HERC3-214ENST00000601319 BCL2P10415 239 aa11.69□□□□□ -0.54
HERC3-214ENST00000601319 SFRP2Q96HF1 295 aa11.69□□□□□ -0.54
HERC3-214ENST00000601319 HERC2O95714 4834 aa11.69□□□□□ -0.54
HERC3-214ENST00000601319 KIAA1109Q2LD37 5005 aa11.68□□□□□ -0.54
HERC3-214ENST00000601319 DYNC1H1Q14204 4646 aaKnown RBP11.68□□□□□ -0.54
HERC3-214ENST00000601319 EVI2AP22794 236 aa11.68□□□□□ -0.54
HERC3-214ENST00000601319 CENPWQ5EE01 88 aa11.68□□□□□ -0.54
HERC3-214ENST00000601319 Q6ZSN1 163 aa11.68□□□□□ -0.54
HERC3-214ENST00000601319 SAMD10Q9BYL1 202 aa11.68□□□□□ -0.54
HERC3-214ENST00000601319 JPT2Q9H910 190 aa11.68□□□□□ -0.54
HERC3-214ENST00000601319 M0R381 172 aa11.67□□□□□ -0.54
HERC3-214ENST00000601319 RPL19P84098 196 aaKnown RBP11.67□□□□□ -0.54
HERC3-214ENST00000601319 PRR27Q6MZM9 219 aa11.67□□□□□ -0.54
HERC3-214ENST00000601319 NFE4Q86UQ8 179 aa11.67□□□□□ -0.54
HERC3-214ENST00000601319 SSBP4Q9BWG4 385 aaPredicted RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 128.6 ms