RNA–Protein interactions for RNA: ENST00000600523.5

SRRM1-223, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 575 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-223ENST00000600523 PTH2Q96A98 100 aa9.15□□□□□ -0.94
SRRM1-223ENST00000600523 HHLA3Q9XRX5 114 aa9.15□□□□□ -0.94
SRRM1-223ENST00000600523 A0A0J9YY99 117 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 GRIFINA4D1Z8 144 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 A8MWV9 139 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 PAX4O43316 350 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 CXCL1P09341 107 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 ARMS2P0C7Q2 107 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 RNASE3P12724 160 aaKnown RBP9.14□□□□□ -0.95
SRRM1-223ENST00000600523 HOXA5P20719 270 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 CCL18P55774 89 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 ZFP82Q8N141 532 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 PARLQ9H300 379 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 SMDT1Q9H4I9 107 aa9.14□□□□□ -0.95
SRRM1-223ENST00000600523 MED14OSP0DP75 135 aa9.13□□□□□ -0.95
SRRM1-223ENST00000600523 RNF212Q495C1 297 aa9.13□□□□□ -0.95
SRRM1-223ENST00000600523 SMIM7Q9BQ49 75 aa9.13□□□□□ -0.95
SRRM1-223ENST00000600523 TENM2Q9NT68 2774 aa9.13□□□□□ -0.95
SRRM1-223ENST00000600523 ZNF727A8MUV8 499 aa9.12□□□□□ -0.95
SRRM1-223ENST00000600523 M0R381 172 aa9.12□□□□□ -0.95
SRRM1-223ENST00000600523 SFTA3P0C7M3 94 aa9.12□□□□□ -0.95
SRRM1-223ENST00000600523 POM121L12Q8N7R1 296 aa9.12□□□□□ -0.95
SRRM1-223ENST00000600523 OR2D3Q8NGH3 330 aa9.12□□□□□ -0.95
SRRM1-223ENST00000600523 ZNF479Q96JC4 524 aa9.12□□□□□ -0.95
SRRM1-223ENST00000600523 ICOSQ9Y6W8 199 aa9.12□□□□□ -0.95
SRRM1-223ENST00000600523 PGPEP1LA6NFU8 196 aa9.11□□□□□ -0.95
SRRM1-223ENST00000600523 RHODO00212 210 aa9.11□□□□□ -0.95
SRRM1-223ENST00000600523 IGLV2-8P01709 118 aa9.11□□□□□ -0.95
SRRM1-223ENST00000600523 CRYBA4P53673 196 aa9.11□□□□□ -0.95
SRRM1-223ENST00000600523 FAM3BP58499 235 aaPredicted RBP9.11□□□□□ -0.95
SRRM1-223ENST00000600523 FHL2Q14192 279 aa9.11□□□□□ -0.95
SRRM1-223ENST00000600523 MRPL23Q16540 153 aaKnown RBP9.11□□□□□ -0.95
SRRM1-223ENST00000600523 FAM74A3Q4VXF1 159 aa9.11□□□□□ -0.95
SRRM1-223ENST00000600523 CFAP126Q5VTH2 177 aa9.11□□□□□ -0.95
SRRM1-223ENST00000600523 LY96Q9Y6Y9 160 aa9.11□□□□□ -0.95
SRRM1-223ENST00000600523 CSMD3Q7Z407 3707 aa9.1□□□□□ -0.95
SRRM1-223ENST00000600523 TRBV20OR9-2A0A075B6H5 130 aa9.1□□□□□ -0.95
SRRM1-223ENST00000600523 RS1O15537 224 aa9.1□□□□□ -0.95
SRRM1-223ENST00000600523 RPL19P84098 196 aaKnown RBP9.1□□□□□ -0.95
SRRM1-223ENST00000600523 SPANXN1Q5VSR9 72 aa9.1□□□□□ -0.95
SRRM1-223ENST00000600523 ZFP2Q6ZN57 461 aa9.1□□□□□ -0.95
SRRM1-223ENST00000600523 OCC1Q8TAD7 63 aa9.1□□□□□ -0.95
SRRM1-223ENST00000600523 PRADC1Q9BSG0 188 aa9.1□□□□□ -0.95
SRRM1-223ENST00000600523 TPPP3Q9BW30 176 aa9.1□□□□□ -0.95
SRRM1-223ENST00000600523 A0A1W2PPQ1 181 aa9.09□□□□□ -0.95
SRRM1-223ENST00000600523 C19orf71A6NCJ1 209 aa9.09□□□□□ -0.95
SRRM1-223ENST00000600523 F2Z2F3 143 aa9.09□□□□□ -0.95
SRRM1-223ENST00000600523 SRP19P09132 144 aaKnown RBP9.09□□□□□ -0.95
SRRM1-223ENST00000600523 OR5AL1P0C617 328 aa9.09□□□□□ -0.95
SRRM1-223ENST00000600523 SRIP30626 198 aa9.09□□□□□ -0.95
SRRM1-223ENST00000600523 ERVFC1-1P60608 527 aa9.09□□□□□ -0.95
SRRM1-223ENST00000600523 RHOHQ15669 191 aa9.09□□□□□ -0.95
SRRM1-223ENST00000600523 SH2D6Q7Z4S9 175 aa9.09□□□□□ -0.95
SRRM1-223ENST00000600523 FER1L6-AS1Q8NA97 138 aa9.09□□□□□ -0.95
SRRM1-223ENST00000600523 SCRT2Q9NQ03 307 aa9.09□□□□□ -0.95
SRRM1-223ENST00000600523 TRBV6-4A0A1B0GX49 114 aa9.08□□□□□ -0.96
SRRM1-223ENST00000600523 SMIM17P0DL12 118 aa9.08□□□□□ -0.96
SRRM1-223ENST00000600523 CACNG7P62955 275 aa9.08□□□□□ -0.96
SRRM1-223ENST00000600523 TMEM241Q24JQ0 296 aa9.08□□□□□ -0.96
SRRM1-223ENST00000600523 FAM74A4Q5TZK3 123 aa9.08□□□□□ -0.96
SRRM1-223ENST00000600523 DMRTA1Q5VZB9 504 aa9.08□□□□□ -0.96
SRRM1-223ENST00000600523 NEGR1Q7Z3B1 354 aa9.08□□□□□ -0.96
SRRM1-223ENST00000600523 NUDT10Q8NFP7 164 aa9.08□□□□□ -0.96
SRRM1-223ENST00000600523 NUDT11Q96G61 164 aa9.08□□□□□ -0.96
SRRM1-223ENST00000600523 RPP21Q9H633 154 aaKnown RBP9.08□□□□□ -0.96
SRRM1-223ENST00000600523 IGHV3-73A0A0B4J1V6 119 aa9.07□□□□□ -0.96
SRRM1-223ENST00000600523 GATCO43716 136 aaKnown RBP9.07□□□□□ -0.96
SRRM1-223ENST00000600523 GYPEP15421 78 aa9.07□□□□□ -0.96
SRRM1-223ENST00000600523 GATA1P15976 413 aaPredicted RBP9.07□□□□□ -0.96
SRRM1-223ENST00000600523 SOHLH1Q5JUK2 328 aa9.07□□□□□ -0.96
SRRM1-223ENST00000600523 C15orf54Q8N8G6 183 aa9.07□□□□□ -0.96
SRRM1-223ENST00000600523 SFRP2Q96HF1 295 aa9.07□□□□□ -0.96
SRRM1-223ENST00000600523 VSIG2Q96IQ7 327 aa9.07□□□□□ -0.96
SRRM1-223ENST00000600523 MUC4Q99102 2169 aa9.06□□□□□ -0.96
SRRM1-223ENST00000600523 A0A096LPF7 62 aa9.06□□□□□ -0.96
SRRM1-223ENST00000600523 SNAI2O43623 268 aa9.06□□□□□ -0.96
SRRM1-223ENST00000600523 CLLU1Q5K131 121 aa9.06□□□□□ -0.96
SRRM1-223ENST00000600523 FAM231DQ6ZW35 169 aa9.06□□□□□ -0.96
SRRM1-223ENST00000600523 BORCS7Q96B45 105 aa9.06□□□□□ -0.96
SRRM1-223ENST00000600523 AP1S3Q96PC3 154 aa9.06□□□□□ -0.96
SRRM1-223ENST00000600523 SSBP4Q9BWG4 385 aaPredicted RBP9.06□□□□□ -0.96
SRRM1-223ENST00000600523 RNASE7Q9H1E1 156 aaKnown RBP9.06□□□□□ -0.96
SRRM1-223ENST00000600523 NAT8Q9UHE5 227 aa9.06□□□□□ -0.96
SRRM1-223ENST00000600523 STARD9Q9P2P6 4700 aa9.06□□□□□ -0.96
SRRM1-223ENST00000600523 A8MWL6 223 aa9.05□□□□□ -0.96
SRRM1-223ENST00000600523 K7EN84 100 aa9.05□□□□□ -0.96
SRRM1-223ENST00000600523 K7EQD1 137 aa9.05□□□□□ -0.96
SRRM1-223ENST00000600523 GZMBP10144 247 aa9.05□□□□□ -0.96
SRRM1-223ENST00000600523 SSTP61278 116 aa9.05□□□□□ -0.96
SRRM1-223ENST00000600523 LINC01551Q86U37 167 aa9.05□□□□□ -0.96
SRRM1-223ENST00000600523 SLC25A29Q8N8R3 303 aa9.05□□□□□ -0.96
SRRM1-223ENST00000600523 OR10AG1Q8NH19 301 aa9.05□□□□□ -0.96
SRRM1-223ENST00000600523 A0A087WWL8 130 aa9.04□□□□□ -0.96
SRRM1-223ENST00000600523 NXPH4O95158 308 aa9.04□□□□□ -0.96
SRRM1-223ENST00000600523 TRGC1P0CF51 173 aa9.04□□□□□ -0.96
SRRM1-223ENST00000600523 SMIM15Q7Z3B0 74 aa9.04□□□□□ -0.96
SRRM1-223ENST00000600523 F5H697 171 aa9.03□□□□□ -0.96
SRRM1-223ENST00000600523 IGLC6P0CF74 106 aa9.03□□□□□ -0.96
SRRM1-223ENST00000600523 ADIRFQ15847 76 aa9.03□□□□□ -0.96
SRRM1-223ENST00000600523 ZNF56Q15929 161 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 228 ms