RNA–Protein interactions for RNA: ENST00000591126.5

SMAD4-212, Transcript of SMAD family member 4, humanhuman

TSL 1 (best)

Gene SMAD4, Length 4,970 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-212ENST00000591126 COX7A2LO14548 114 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 IGHV4-30-4P0DP06 118 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 GAGE6Q13070 117 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 TRAV12-2A0A075B6T6 113 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 C22orf34Q6ZV56 151 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 RNF222A6NCQ9 220 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 SDHAF1A6NFY7 115 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 RPL23P62829 140 aaKnown RBP4.78□□□□□ -1.64
SMAD4-212ENST00000591126 CAMK2N2Q96S95 79 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 GTSF1LQ9H1H1 148 aa4.78□□□□□ -1.64
SMAD4-212ENST00000591126 IGKV1-39P01597 117 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 IGKV1D-39P04432 117 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 LINC00614P0C842 121 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 CDSNQ15517 529 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 Q8N8P6 123 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 DOCK7Q96N67 2140 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 SMR3AQ99954 134 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 KLF12Q9Y4X4 402 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 A0A087WWL8 130 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 TRAV13-1A0A0B4J241 112 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 TRBV6-4A0A1B0GX49 114 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 TMEM213A2RRL7 107 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 TYMSP04818 313 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 RNF151Q2KHN1 245 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 FAM222AQ5U5X8 452 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 FXYD5Q96DB9 178 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 SPTAN1Q13813 2472 aaKnown RBP4.77□□□□□ -1.65
SMAD4-212ENST00000591126 A0A0G2JRQ6 117 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 CRYGDP07320 174 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 OCC1Q8TAD7 63 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 C11orf52Q96A22 123 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 TIMM21Q9BVV7 248 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 FNDC4Q9H6D8 234 aaPredicted RBP4.77□□□□□ -1.65
SMAD4-212ENST00000591126 Q9HAA7 133 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 CBLN2Q8IUK8 224 aa4.77□□□□□ -1.65
SMAD4-212ENST00000591126 TSPAN13O95857 204 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 PRIMA1Q86XR5 153 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 CCDC140Q96MF4 163 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 TMEM126AQ9H061 195 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 SLC17A3O00476 420 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 MIAQ16674 131 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 B9D2Q9BPU9 175 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 PRSS29PA6NIE9 313 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 FRMD6-AS1P0C7T7 363 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 MLANAQ16655 118 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 MUC7Q8TAX7 377 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP4.76□□□□□ -1.651e-7■■□□□ 12.7
SMAD4-212ENST00000591126 IGKCP01834 107 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 PMVKQ15126 192 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 KRTAP24-1Q3LI83 254 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 AMTNQ6UX39 209 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 IFI27L1Q96BM0 104 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 CACNA1DQ01668 2161 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 NOTCH2Q04721 2471 aa4.76□□□□□ -1.65
SMAD4-212ENST00000591126 LTAP01374 205 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 FAM104BQ5XKR9 115 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 CARHSP1Q9Y2V2 147 aaKnown RBP4.75□□□□□ -1.65
SMAD4-212ENST00000591126 C9JQL5 133 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 BTCP35070 178 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 C1orf134Q5TEV5 83 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 ZNF706Q9Y5V0 76 aaPredicted RBP4.75□□□□□ -1.65
SMAD4-212ENST00000591126 MED13Q9UHV7 2174 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 CHD7Q9P2D1 2997 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 LINC00205P59089 165 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 GCSAMLQ5JQS6 135 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 DYNAPQ8N1N2 210 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 ZNF581Q9P0T4 197 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 IGHV4-28A0A0C4DH34 117 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 LINC01545Q5VT33 79 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 VPS25Q9BRG1 176 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 RNASE7Q9H1E1 156 aaKnown RBP4.75□□□□□ -1.65
SMAD4-212ENST00000591126 DMRT1Q9Y5R6 373 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 DYSFO75923 2080 aa4.75□□□□□ -1.65
SMAD4-212ENST00000591126 IGHV3-16A0A0C4DH30 117 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 IGHV1-58A0A0C4DH39 117 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 SMIM13P0DJ93 91 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 GFI1BQ5VTD9 330 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 PGPEP1Q9NXJ5 209 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 HEATR5AQ86XA9 2040 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 LELP1Q5T871 98 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 IGFL4Q6B9Z1 124 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 D6R8Y8 96 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 DNLZQ5SXM8 178 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 NAV2Q8IVL1 2488 aa4.74□□□□□ -1.65
SMAD4-212ENST00000591126 PHF3Q92576 2039 aaKnown RBP4.74□□□□□ -1.65
SMAD4-212ENST00000591126 hDV102S1A0JD36 115 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 AVPP01185 164 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 SLC25A29Q8N8R3 303 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 SMIM2Q9BVW6 85 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 WFDC1Q9HC57 220 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 YLPM1P49750 1951 aaKnown RBP4.73□□□□□ -1.65
SMAD4-212ENST00000591126 TRAV26-1A0A087WT03 109 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 ETDCA0A1B0GVM5 59 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 IGHV3-30P01768 117 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 IGHV3-33P01772 117 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 IGHV3-30-3P0DP02 117 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 IGHV3-30-5P0DP03 117 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 UBE2AP49459 152 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 ZFAND6Q6FIF0 208 aa4.73□□□□□ -1.65
SMAD4-212ENST00000591126 LINC01551Q86U37 167 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 191 ms