RNA–Protein interactions for RNA: ENST00000589349.5

DNMT1-219, Transcript of DNA methyltransferase 1, human

TSL 4

Gene DNMT1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DNMT1-219	ENST00000589349	ARPC5	O15511	151 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	GNRH2	O43555	120 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	UBE2G2	P60604	165 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	SLA	Q13239	276 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	TTC32	Q5I0X7	151 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	RPL7L1	Q6DKI1	246 aa	Known RBP	5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349		Q6ZR54	194 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	LINC00612	Q8N6U2	182 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	OR4C5	Q8NGB2	326 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	ASB13	Q8WXK3	278 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	ST6GAL2	Q96JF0	529 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	AQP10	Q96PS8	301 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	LINC00467	Q9BRT7	94 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	TMEM167B	Q9NRX6	74 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	PRO0255	Q9UI72	69 aa		5.69	□□□□□ -1.5
DNMT1-219	ENST00000589349	IGLV5-52	A0A0A0MRZ9	124 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	IGHV3-16	A0A0C4DH30	117 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	TRBV7-9	A0A0J9YWB2	115 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	GAGE10	A6NGK3	116 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	C16orf90	A8MZG2	172 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	SRI	P30626	198 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	FGF8	P55075	233 aa	Predicted RBP	5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	SERF2	P84101	59 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	MRPL23	Q16540	153 aa	Known RBP	5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	SERTAD4-AS1	Q5TG53	156 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	C5orf17	Q8NAS9	161 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	NHLRC2	Q8NBF2	726 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	NEXN-AS1	Q8NBZ9	246 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	SPX	Q9BT56	116 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	PSMG3	Q9BT73	122 aa	Predicted RBP	5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	PSG8	Q9UQ74	426 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	LENEP	Q9Y5L5	61 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	KMT2A	Q03164	3969 aa		5.68	□□□□□ -1.5
DNMT1-219	ENST00000589349	NACA	E9PAV3	2078 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	IGHV3-73	A0A0B4J1V6	119 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	TRAV34	A0A0B4J273	112 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349		A0A1B0GV50	99 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	SERTM2	A0A1B0GWG4	89 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349		H3BNG1	76 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	SMLR1	H3BR10	107 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349		M0R2P5	195 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	TAAR5	O14804	337 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	SIVA1	O15304	175 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	NXPH4	O95158	308 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	GCG	P01275	180 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	TCRA	P04437	139 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	STAG3L2	P0CL84	134 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	STAG3L3	P0CL85	134 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	S100A4	P26447	101 aa	Known RBP	5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	PPT1	P50897	306 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	SMUG1	Q53HV7	270 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	CST9LP1	Q5W188	147 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349		Q6AWC8	147 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	VSIG2	Q96IQ7	327 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	KCNS1	Q96KK3	526 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	EPDR1	Q9UM22	224 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	TNFSF18	Q9UNG2	199 aa		5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	MRPS16	Q9Y3D3	137 aa	Known RBP	5.67	□□□□□ -1.5
DNMT1-219	ENST00000589349	TRAV9-2	A0A087WT02	112 aa		5.66	□□□□□ -1.5
DNMT1-219	ENST00000589349	TYMS	P04818	313 aa		5.66	□□□□□ -1.5
DNMT1-219	ENST00000589349	CRYBA4	P53673	196 aa		5.66	□□□□□ -1.5
DNMT1-219	ENST00000589349	FLI1	Q01543	452 aa	Predicted RBP	5.66	□□□□□ -1.5
DNMT1-219	ENST00000589349	ZNF876P	Q49A33	203 aa		5.66	□□□□□ -1.5
DNMT1-219	ENST00000589349	NEGR1	Q7Z3B1	354 aa		5.66	□□□□□ -1.5
DNMT1-219	ENST00000589349	CYB561D1	Q8N8Q1	229 aa		5.66	□□□□□ -1.5
DNMT1-219	ENST00000589349	STOML3	Q8TAV4	291 aa		5.66	□□□□□ -1.5
DNMT1-219	ENST00000589349	CTXND1	A0A1B0GTU2	59 aa		5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349		A0A1B0GVY2	172 aa		5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349	ORM1	P02763	201 aa		5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349	UBE2G1	P62253	170 aa		5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349	GAGE1	Q13065	139 aa		5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349	GAGE4	Q13068	117 aa		5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349	LGALSL	Q3ZCW2	172 aa	Predicted RBP	5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349	SAPCD1	Q5SSQ6	148 aa		5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349	TVP23C	Q96ET8	276 aa		5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349	LINC00479	Q96M42	142 aa		5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349	TXNDC17	Q9BRA2	123 aa		5.65	□□□□□ -1.5
DNMT1-219	ENST00000589349	IGLV5-37	A0A075B6J1	123 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	TRAV4	A0A0B4J268	109 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	KANTR	A0A1W2PQU2	76 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	MAP1LC3B2	A6NCE7	125 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	RNF222	A6NCQ9	220 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	FBLL1	A6NHQ2	334 aa	Known RBP	5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	GGTLC3	B5MD39	225 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349		K7EQD1	137 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	PEX7	O00628	323 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	PFDN1	O60925	122 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	PFN1	P07737	140 aa	Known RBP	5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	EVI2A	P22794	236 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	RPL36A	P83881	106 aa	Known RBP	5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	LYPD5	Q6UWN5	251 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	SPATA12	Q7Z6I5	190 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	ARL6IP6	Q8N6S5	226 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	TMEM75	Q8N9X5	138 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	FAM213B	Q8TBF2	198 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	RASL10A	Q92737	203 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	C18orf15	Q96N68	181 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	PRADC1	Q9BSG0	188 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	MAP1LC3B	Q9GZQ8	125 aa		5.64	□□□□□ -1.51
DNMT1-219	ENST00000589349	LY96	Q9Y6Y9	160 aa		5.64	□□□□□ -1.51

Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms