RNA–Protein interactions for RNA: ENST00000586318.1

TCF3-208, Transcript of transcription factor 3, human

TSL 3

Gene TCF3, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TCF3-208	ENST00000586318	ANAPC16	Q96DE5	110 aa		11.9	□□□□□ -0.5
TCF3-208	ENST00000586318	SSBP4	Q9BWG4	385 aa	Predicted RBP	11.9	□□□□□ -0.5
TCF3-208	ENST00000586318	CELA1	Q9UNI1	258 aa		11.9	□□□□□ -0.5
TCF3-208	ENST00000586318	CXorf65	A6NEN9	183 aa		11.89	□□□□□ -0.51
TCF3-208	ENST00000586318	APOC3	P02656	99 aa		11.89	□□□□□ -0.51
TCF3-208	ENST00000586318	LGALS9B	Q3B8N2	356 aa		11.89	□□□□□ -0.51
TCF3-208	ENST00000586318	LINC00612	Q8N6U2	182 aa		11.89	□□□□□ -0.51
TCF3-208	ENST00000586318	CLRN3	Q8NCR9	226 aa		11.89	□□□□□ -0.51
TCF3-208	ENST00000586318	GFRA4	Q9GZZ7	299 aa		11.89	□□□□□ -0.51
TCF3-208	ENST00000586318	EDA2R	Q9HAV5	297 aa		11.89	□□□□□ -0.51
TCF3-208	ENST00000586318	TRGV1	A0A0A0MS02	117 aa		11.88	□□□□□ -0.51
TCF3-208	ENST00000586318	FAM231B	A6NCW3	169 aa		11.88	□□□□□ -0.51
TCF3-208	ENST00000586318	SVBP	Q8N300	66 aa		11.88	□□□□□ -0.51
TCF3-208	ENST00000586318	GTSF1	Q8WW33	167 aa		11.88	□□□□□ -0.51
TCF3-208	ENST00000586318	MRPL16	Q9NX20	251 aa	Known RBP	11.88	□□□□□ -0.51
TCF3-208	ENST00000586318	PHLDA3	Q9Y5J5	127 aa		11.88	□□□□□ -0.51
TCF3-208	ENST00000586318	MUC4	Q99102	2169 aa		11.88	□□□□□ -0.51
TCF3-208	ENST00000586318		F2Z2F3	143 aa		11.87	□□□□□ -0.51
TCF3-208	ENST00000586318	FOXA3	P55318	350 aa	Predicted RBP	11.87	□□□□□ -0.51
TCF3-208	ENST00000586318		Q6ZTI0	123 aa		11.87	□□□□□ -0.51
TCF3-208	ENST00000586318	C11orf45	Q8TAV5	145 aa		11.87	□□□□□ -0.51
TCF3-208	ENST00000586318	RASL10A	Q92737	203 aa		11.87	□□□□□ -0.51
TCF3-208	ENST00000586318	NDUFAF3	Q9BU61	184 aa		11.87	□□□□□ -0.51
TCF3-208	ENST00000586318	SNAPIN	O95295	136 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	CTRL	P40313	264 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	RHEB	Q15382	184 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	ZNF876P	Q49A33	203 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	PIK3CD-AS1	Q5SR53	167 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	LYZL1	Q6UWQ5	148 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	ZFP82	Q8N141	532 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	SYT8	Q8NBV8	401 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	OR10AG1	Q8NH19	301 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	TPPP3	Q9BW30	176 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	CTDSP1	Q9GZU7	261 aa		11.86	□□□□□ -0.51
TCF3-208	ENST00000586318	SMIM27	A0A1W2PRY6	76 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	GAGE12B	A1L429	117 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	C7orf77	A4D0Y5	90 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	GAGE7	O76087	117 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	NXPH4	O95158	308 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	GAGE12F	P0CL80	117 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	GAGE12G	P0CL81	117 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	GAGE12I	P0CL82	117 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	DEFB130B	P0DP73	79 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	DEFB130A	P0DP74	79 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	DAD1	P61803	113 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	CACNG7	P62955	275 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	C12orf74	Q32Q52	190 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	WDR73	Q6P4I2	378 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318	C18orf15	Q96N68	181 aa		11.85	□□□□□ -0.51
TCF3-208	ENST00000586318		A0A087WWC5	75 aa		11.84	□□□□□ -0.51
TCF3-208	ENST00000586318	HIGD1C	A8MV81	97 aa		11.84	□□□□□ -0.51
TCF3-208	ENST00000586318	SPANXN1	Q5VSR9	72 aa		11.84	□□□□□ -0.51
TCF3-208	ENST00000586318	DMRTA1	Q5VZB9	504 aa		11.84	□□□□□ -0.51
TCF3-208	ENST00000586318	PGLYRP4	Q96LB8	373 aa		11.84	□□□□□ -0.51
TCF3-208	ENST00000586318	CNFN	Q9BYD5	112 aa		11.84	□□□□□ -0.51
TCF3-208	ENST00000586318	NAT8B	Q9UHF3	227 aa		11.84	□□□□□ -0.51
TCF3-208	ENST00000586318	IGHV4-4	A0A075B6R2	117 aa		11.83	□□□□□ -0.52
TCF3-208	ENST00000586318	MUC21	A0A0G2JKD1	596 aa		11.83	□□□□□ -0.52
TCF3-208	ENST00000586318	MUC21	A0A140T8X8	626 aa		11.83	□□□□□ -0.52
TCF3-208	ENST00000586318		M0R381	172 aa		11.83	□□□□□ -0.52
TCF3-208	ENST00000586318	NANOS2	P60321	138 aa	Known RBP	11.83	□□□□□ -0.52
TCF3-208	ENST00000586318	TMEM242	Q9NWH2	141 aa		11.83	□□□□□ -0.52
TCF3-208	ENST00000586318	TRGV2	A0A075B6R0	118 aa		11.82	□□□□□ -0.52
TCF3-208	ENST00000586318	NUP35	Q8NFH5	326 aa		11.82	□□□□□ -0.52
TCF3-208	ENST00000586318	RPS10P5	Q9NQ39	176 aa		11.82	□□□□□ -0.52
TCF3-208	ENST00000586318	TRAV4	A0A0B4J268	109 aa		11.81	□□□□□ -0.52
TCF3-208	ENST00000586318	RS1	O15537	224 aa		11.81	□□□□□ -0.52
TCF3-208	ENST00000586318	BORCS7	Q96B45	105 aa		11.81	□□□□□ -0.52
TCF3-208	ENST00000586318	IMMP2L	Q96T52	175 aa		11.81	□□□□□ -0.52
TCF3-208	ENST00000586318	COL7A1	Q02388	2944 aa		11.81	□□□□□ -0.52
TCF3-208	ENST00000586318		A0A1B0GUT8	65 aa		11.8	□□□□□ -0.52
TCF3-208	ENST00000586318		A8MWV9	139 aa		11.8	□□□□□ -0.52
TCF3-208	ENST00000586318	NTF3	P20783	257 aa		11.8	□□□□□ -0.52
TCF3-208	ENST00000586318		Q6ZTC4	211 aa		11.8	□□□□□ -0.52
TCF3-208	ENST00000586318	POM121L12	Q8N7R1	296 aa		11.8	□□□□□ -0.52
TCF3-208	ENST00000586318	CIDEA	O60543	219 aa		11.79	□□□□□ -0.52
TCF3-208	ENST00000586318	ATP5G1	P05496	136 aa		11.79	□□□□□ -0.52
TCF3-208	ENST00000586318	SST	P61278	116 aa		11.79	□□□□□ -0.52
TCF3-208	ENST00000586318	CFAP126	Q5VTH2	177 aa		11.79	□□□□□ -0.52
TCF3-208	ENST00000586318	OR4C5	Q8NGB2	326 aa		11.79	□□□□□ -0.52
TCF3-208	ENST00000586318	JPT2	Q9H910	190 aa		11.79	□□□□□ -0.52
TCF3-208	ENST00000586318	TRGC1	P0CF51	173 aa		11.78	□□□□□ -0.52
TCF3-208	ENST00000586318	FAM3B	P58499	235 aa	Predicted RBP	11.78	□□□□□ -0.52
TCF3-208	ENST00000586318	RIG	Q13278	110 aa		11.78	□□□□□ -0.52
TCF3-208	ENST00000586318	TWIST1	Q15672	202 aa		11.78	□□□□□ -0.52
TCF3-208	ENST00000586318	AP1S3	Q96PC3	154 aa		11.78	□□□□□ -0.52
TCF3-208	ENST00000586318	MSRB1	Q9NZV6	116 aa		11.78	□□□□□ -0.52
TCF3-208	ENST00000586318	STAB2	Q8WWQ8	2551 aa		11.78	□□□□□ -0.52
TCF3-208	ENST00000586318	NACA	E9PAV3	2078 aa		11.77	□□□□□ -0.52
TCF3-208	ENST00000586318	IGHV3-53	P01767	116 aa		11.77	□□□□□ -0.53
TCF3-208	ENST00000586318	KCNIP4	Q6PIL6	250 aa		11.77	□□□□□ -0.53
TCF3-208	ENST00000586318	ATRAID	Q6UW56	229 aa		11.77	□□□□□ -0.53
TCF3-208	ENST00000586318	ZNF479	Q96JC4	524 aa		11.77	□□□□□ -0.53
TCF3-208	ENST00000586318	WWC2-AS2	Q96NR7	200 aa		11.77	□□□□□ -0.53
TCF3-208	ENST00000586318	TRAV10	A0A0B4J240	114 aa		11.76	□□□□□ -0.53
TCF3-208	ENST00000586318	RHOD	O00212	210 aa		11.76	□□□□□ -0.53
TCF3-208	ENST00000586318	CRYGD	P07320	174 aa		11.76	□□□□□ -0.53
TCF3-208	ENST00000586318	S100P	P25815	95 aa		11.76	□□□□□ -0.53
TCF3-208	ENST00000586318	UFSP1	Q6NVU6	142 aa		11.76	□□□□□ -0.53
TCF3-208	ENST00000586318	ZFP2	Q6ZN57	461 aa		11.76	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms