RNA–Protein interactions for RNA: ENST00000585741.1

HMG20B-215, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-215ENST00000585741 TCL1AP56279 114 aa12.2□□□□□ -0.46
HMG20B-215ENST00000585741 RNASE8Q8TDE3 154 aaKnown RBP12.2□□□□□ -0.46
HMG20B-215ENST00000585741 IL36BQ9NZH7 164 aa12.2□□□□□ -0.46
HMG20B-215ENST00000585741 NAT8BQ9UHF3 227 aa12.2□□□□□ -0.46
HMG20B-215ENST00000585741 FAM231BA6NCW3 169 aa12.19□□□□□ -0.46
HMG20B-215ENST00000585741 F2Z2F3 143 aa12.19□□□□□ -0.46
HMG20B-215ENST00000585741 MED14OSP0DP75 135 aa12.19□□□□□ -0.46
HMG20B-215ENST00000585741 DNLZQ5SXM8 178 aa12.19□□□□□ -0.46
HMG20B-215ENST00000585741 SPANXN1Q5VSR9 72 aa12.19□□□□□ -0.46
HMG20B-215ENST00000585741 SYT8Q8NBV8 401 aa12.19□□□□□ -0.46
HMG20B-215ENST00000585741 HIGD1CA8MV81 97 aa12.18□□□□□ -0.46
HMG20B-215ENST00000585741 SSTP61278 116 aa12.18□□□□□ -0.46
HMG20B-215ENST00000585741 PGLYRP4Q96LB8 373 aa12.18□□□□□ -0.46
HMG20B-215ENST00000585741 NOP10Q9NPE3 64 aaKnown RBP12.18□□□□□ -0.46
HMG20B-215ENST00000585741 TMEM242Q9NWH2 141 aa12.18□□□□□ -0.46
HMG20B-215ENST00000585741 BIRC6Q9NR09 4857 aa12.18□□□□□ -0.46
HMG20B-215ENST00000585741 TENM2Q9NT68 2774 aa12.18□□□□□ -0.46
HMG20B-215ENST00000585741 DEFB4AO15263 64 aa12.17□□□□□ -0.46
HMG20B-215ENST00000585741 RNASE3P12724 160 aaKnown RBP12.17□□□□□ -0.46
HMG20B-215ENST00000585741 CACNG7P62955 275 aa12.17□□□□□ -0.46
HMG20B-215ENST00000585741 LYZL1Q6UWQ5 148 aa12.17□□□□□ -0.46
HMG20B-215ENST00000585741 ZFP82Q8N141 532 aa12.17□□□□□ -0.46
HMG20B-215ENST00000585741 DNAH1Q9P2D7 4330 aa12.17□□□□□ -0.46
HMG20B-215ENST00000585741 LYSTQ99698 3801 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 TRGV1A0A0A0MS02 117 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 TEX48A0A1B0GUV7 120 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 SMIM27A0A1W2PRY6 76 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 M0R2P5 195 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 M0R381 172 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 OR5AL1P0C617 328 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 IGLC6P0CF74 106 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 Q8NAQ8 132 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 C11orf72Q8NBR9 251 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 C9orf85Q96MD7 179 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 IMMP2LQ96T52 175 aa12.16□□□□□ -0.46
HMG20B-215ENST00000585741 MUC21A0A0G2JKD1 596 aa12.15□□□□□ -0.46
HMG20B-215ENST00000585741 MUC21A0A140T8X8 626 aa12.15□□□□□ -0.46
HMG20B-215ENST00000585741 SNAI2O43623 268 aa12.15□□□□□ -0.46
HMG20B-215ENST00000585741 DAZ2Q13117 558 aaKnown RBP12.15□□□□□ -0.46
HMG20B-215ENST00000585741 ZNF876PQ49A33 203 aa12.15□□□□□ -0.46
HMG20B-215ENST00000585741 GTSF1Q8WW33 167 aa12.15□□□□□ -0.46
HMG20B-215ENST00000585741 STARD9Q9P2P6 4700 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 A0A1B0GUT8 65 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 CXorf65A6NEN9 183 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 LYRM9A8MSI8 78 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 C3orf84H3BNL1 204 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 SPART-AS1P0CW21 52 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 FOXA3P55318 350 aaPredicted RBP12.14□□□□□ -0.47
HMG20B-215ENST00000585741 FAM3BP58499 235 aaPredicted RBP12.14□□□□□ -0.47
HMG20B-215ENST00000585741 RIGQ13278 110 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 ATRAIDQ6UW56 229 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 SMIM15Q7Z3B0 74 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 NUP35Q8NFH5 326 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 SSBP4Q9BWG4 385 aaPredicted RBP12.14□□□□□ -0.47
HMG20B-215ENST00000585741 C11orf68Q9H3H3 251 aaKnown RBP12.14□□□□□ -0.47
HMG20B-215ENST00000585741 MRPL16Q9NX20 251 aaKnown RBP12.14□□□□□ -0.47
HMG20B-215ENST00000585741 URGCP-MRPS24S4R325 110 aa12.14□□□□□ -0.47
HMG20B-215ENST00000585741 TRGV2A0A075B6R0 118 aa12.13□□□□□ -0.47
HMG20B-215ENST00000585741 A0A0J9YWU9 116 aa12.13□□□□□ -0.47
HMG20B-215ENST00000585741 SPINK4O60575 86 aa12.13□□□□□ -0.47
HMG20B-215ENST00000585741 CTRLP40313 264 aa12.13□□□□□ -0.47
HMG20B-215ENST00000585741 TWIST1Q15672 202 aa12.13□□□□□ -0.47
HMG20B-215ENST00000585741 LGALS9BQ3B8N2 356 aa12.13□□□□□ -0.47
HMG20B-215ENST00000585741 FAM222AQ5U5X8 452 aa12.13□□□□□ -0.47
HMG20B-215ENST00000585741 OR10AG1Q8NH19 301 aa12.13□□□□□ -0.47
HMG20B-215ENST00000585741 SCRT2Q9NQ03 307 aa12.13□□□□□ -0.47
HMG20B-215ENST00000585741 SMCO4Q9NRQ5 59 aa12.13□□□□□ -0.47
HMG20B-215ENST00000585741 GAGE12BA1L429 117 aa12.12□□□□□ -0.47
HMG20B-215ENST00000585741 GAGE7O76087 117 aa12.12□□□□□ -0.47
HMG20B-215ENST00000585741 GAGE12FP0CL80 117 aa12.12□□□□□ -0.47
HMG20B-215ENST00000585741 GAGE12GP0CL81 117 aa12.12□□□□□ -0.47
HMG20B-215ENST00000585741 GAGE12IP0CL82 117 aa12.12□□□□□ -0.47
HMG20B-215ENST00000585741 SMIM17P0DL12 118 aa12.12□□□□□ -0.47
HMG20B-215ENST00000585741 DAD1P61803 113 aa12.12□□□□□ -0.47
HMG20B-215ENST00000585741 WDR73Q6P4I2 378 aa12.12□□□□□ -0.47
HMG20B-215ENST00000585741 BTF3L4Q96K17 158 aa12.12□□□□□ -0.47
HMG20B-215ENST00000585741 CSMD3Q7Z407 3707 aa12.12□□□□□ -0.47
HMG20B-215ENST00000585741 PLAC8L1A1L4L8 177 aa12.11□□□□□ -0.47
HMG20B-215ENST00000585741 S100A8P05109 93 aa12.11□□□□□ -0.47
HMG20B-215ENST00000585741 TRGC1P0CF51 173 aa12.11□□□□□ -0.47
HMG20B-215ENST00000585741 DEFB130BP0DP73 79 aa12.11□□□□□ -0.47
HMG20B-215ENST00000585741 DEFB130AP0DP74 79 aa12.11□□□□□ -0.47
HMG20B-215ENST00000585741 NTF3P20783 257 aa12.11□□□□□ -0.47
HMG20B-215ENST00000585741 ZNF575Q86XF7 245 aa12.11□□□□□ -0.47
HMG20B-215ENST00000585741 IL17DQ8TAD2 202 aa12.11□□□□□ -0.47
HMG20B-215ENST00000585741 TRAV9-1A0A075B6T8 112 aa12.1□□□□□ -0.47
HMG20B-215ENST00000585741 CASC10Q5T4H9 136 aa12.1□□□□□ -0.47
HMG20B-215ENST00000585741 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
HMG20B-215ENST00000585741 MRPL54Q6P161 138 aaKnown RBP12.1□□□□□ -0.47
HMG20B-215ENST00000585741 Q6ZTI0 123 aa12.1□□□□□ -0.47
HMG20B-215ENST00000585741 PTH2Q96A98 100 aa12.1□□□□□ -0.47
HMG20B-215ENST00000585741 AP1S3Q96PC3 154 aa12.1□□□□□ -0.47
HMG20B-215ENST00000585741 NDUFAF3Q9BU61 184 aa12.1□□□□□ -0.47
HMG20B-215ENST00000585741 DKK2Q9UBU2 259 aa12.1□□□□□ -0.47
HMG20B-215ENST00000585741 A0A1B0GW15 77 aa12.09□□□□□ -0.47
HMG20B-215ENST00000585741 A8MWV9 139 aa12.09□□□□□ -0.47
HMG20B-215ENST00000585741 PIK3CD-AS1Q5SR53 167 aa12.09□□□□□ -0.47
HMG20B-215ENST00000585741 TMEM88Q6PEY1 159 aa12.09□□□□□ -0.47
HMG20B-215ENST00000585741 ATP5L2Q7Z4Y8 100 aa12.09□□□□□ -0.47
HMG20B-215ENST00000585741 RASL10AQ92737 203 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 149.6 ms