RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 C7orf71A4D174 169 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 A6NDN8 102 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 I3L2K1 104 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 M0R1B8 84 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 CCL21O00585 134 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 MRPS12O15235 138 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 NDUFB3O43676 98 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 IGLV1-47P01700 117 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 PRB1P04280 392 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 HLA-DRB4P13762 266 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 HTR1DP28221 377 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 RPL27AP46776 148 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 HSD52Q0P140 79 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 PSG3Q16557 428 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 LDLRAD2Q5SZI1 272 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 FAM104BQ5XKR9 115 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 DUX4L9Q6RFH8 374 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 IGFL3Q6UXB1 125 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 FA2HQ7L5A8 372 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 Q86TA4 180 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 FAM216BQ8N7L0 139 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 DEFB108BQ8NET1 73 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 FDCSPQ8NFU4 85 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 OR5A1Q8NGJ0 315 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 ZNF502Q8TBZ5 544 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 BLNKQ8WV28 456 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 SRSF12Q8WXF0 261 aaKnown RBP2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 VPS25Q9BRG1 176 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 SHANK2-AS3Q9BTD1 123 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 SLC25A39Q9BZJ4 359 aaPredicted RBP2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 RABAC1Q9UI14 185 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 PSG8Q9UQ74 426 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 SIGLEC9Q9Y336 463 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 HLA-DRB4X5D2U9 266 aa2.78□□□□□ -1.96
SMCHD1-208ENST00000583344 DSCAML1Q8TD84 2053 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 CEP250Q9BV73 2442 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 TPRP12270 2363 aaKnown RBP2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 A0A1B0GWB2 263 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 LY6LH3BQJ8 138 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 H3BRN7 92 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 K7EP34 96 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 RBP4P02753 201 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 ARMS2P0C7Q2 107 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 SMIM13P0DJ93 91 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 IGHV1-8P0DP01 117 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 SCGB1A1P11684 91 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 CCL3L1P16619 93 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 EVI2AP22794 236 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 CD24P25063 80 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 LOXP28300 417 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 ZNF138P52744 262 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 PDE6HQ13956 83 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 DIAPH2-AS1Q14236 149 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 TAL2Q16559 108 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 KLK9Q2XQG4 91 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 TMEM155Q4W5P6 130 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 C10orf55Q5SWW7 151 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 HES3Q5TGS1 186 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 PRNTQ86SH4 94 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 PPP1R27Q86WC6 154 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 OR2K2Q8NGT1 345 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 ZC2HC1AQ96GY0 325 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 TMEM133Q9H2Q1 129 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 ZNRD1Q9P1U0 126 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 SMPXQ9UHP9 88 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 KLK9Q9UKQ9 250 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 HHLA3Q9XRX5 114 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 FAM215AQ9Y5M1 114 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 INSIG2Q9Y5U4 225 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 USF3Q68DE3 2245 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 CABIN1Q9Y6J0 2220 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 WDFY3Q8IZQ1 3526 aa2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 EP300Q09472 2414 aaPredicted RBP2.77□□□□□ -1.97
SMCHD1-208ENST00000583344 VPS13AQ96RL7 3174 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 FRYLO94915 3013 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 IGHV1-3A0A0C4DH29 117 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 A0A0G2JLM5 398 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 A0A1W2PPM0 123 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 TMEM238C9JI98 176 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 LINC01619G3V211 115 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 BUB1B-PAK6H3BSN5 160 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 NCR2O95944 276 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 IGKV1-17P01599 117 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 IGHV3-48P01763 117 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 HBDP02042 147 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 IGLC6P0CF74 106 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 FCER1GP30273 86 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 IFI27P40305 119 aaPredicted RBP2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 ATP5J2P56134 94 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 RPL32P62910 135 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 SRSF6Q13247 344 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 NSUN5P1Q3KNT7 163 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 MRPL51Q4U2R6 128 aaKnown RBP2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 HCP5Q6MZN7 132 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 LYZL1Q6UWQ5 148 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 LYPD2Q6UXB3 125 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 Q6ZS92 163 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 GOLT1AQ6ZVE7 132 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 ORMDL3Q8N138 153 aa2.76□□□□□ -1.97
SMCHD1-208ENST00000583344 EXOC3-AS1Q8N2X6 119 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 142.1 ms