RNA–Protein interactions for RNA: ENST00000581979.5

SRSF1-204, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 1 (best)

Gene SRSF1, Length 1,720 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-204ENST00000581979 KIAA1644Q3SXP7 199 aa9.22□□□□□ -0.93
SRSF1-204ENST00000581979 TRPT1Q86TN4 253 aaKnown RBP9.22□□□□□ -0.93
SRSF1-204ENST00000581979 STAB2Q8WWQ8 2551 aa9.21□□□□□ -0.93
SRSF1-204ENST00000581979 NBEAL2Q6ZNJ1 2754 aa9.21□□□□□ -0.94
SRSF1-204ENST00000581979 CRXO43186 299 aaPredicted RBP9.21□□□□□ -0.94
SRSF1-204ENST00000581979 OR5AL1P0C617 328 aa9.21□□□□□ -0.94
SRSF1-204ENST00000581979 NTF3P20783 257 aa9.21□□□□□ -0.94
SRSF1-204ENST00000581979 SLAQ13239 276 aa9.21□□□□□ -0.94
SRSF1-204ENST00000581979 GTSCR1Q86UQ5 136 aa9.21□□□□□ -0.94
SRSF1-204ENST00000581979 WFDC10AQ9H1F0 79 aa9.21□□□□□ -0.94
SRSF1-204ENST00000581979 C19orf73Q9NVV2 129 aa9.21□□□□□ -0.94
SRSF1-204ENST00000581979 IGHV1OR15-1A0A075B7D0 117 aa9.2□□□□□ -0.94
SRSF1-204ENST00000581979 SNAI2O43623 268 aa9.2□□□□□ -0.94
SRSF1-204ENST00000581979 AMBPP02760 352 aa9.2□□□□□ -0.94
SRSF1-204ENST00000581979 NUTF2P61970 127 aaKnown RBP9.2□□□□□ -0.94
SRSF1-204ENST00000581979 SNRPEP62304 92 aaKnown RBP9.2□□□□□ -0.94
SRSF1-204ENST00000581979 CACNG7P62955 275 aa9.2□□□□□ -0.94
SRSF1-204ENST00000581979 KMT2CQ8NEZ4 4911 aaKnown RBP9.2□□□□□ -0.94
SRSF1-204ENST00000581979 INSP01308 110 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 MED14OSP0DP75 135 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 TDRG1Q3Y452 100 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 DNLZQ5SXM8 178 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 SPANXN1Q5VSR9 72 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 GATD1Q8NB37 220 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 OR10AG1Q8NH19 301 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 CNFNQ9BYD5 112 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 LOC105371267A0A1B0GV96 52 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 RBMY1A1P0DJD3 496 aaKnown RBP9.19□□□□□ -0.94
SRSF1-204ENST00000581979 RBMY1CP0DJD4 496 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 RBMY1FQ15415 496 aaKnown RBP9.19□□□□□ -0.94
SRSF1-204ENST00000581979 MSRB1Q9NZV6 116 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 TP53TG3Q9ULZ0 132 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 PHLDA3Q9Y5J5 127 aa9.19□□□□□ -0.94
SRSF1-204ENST00000581979 CBY3A6NI87 242 aa9.18□□□□□ -0.94
SRSF1-204ENST00000581979 SRIP30626 198 aa9.18□□□□□ -0.94
SRSF1-204ENST00000581979 ZNF493Q6ZR52 646 aa9.18□□□□□ -0.94
SRSF1-204ENST00000581979 C20orf144Q9BQM9 153 aa9.18□□□□□ -0.94
SRSF1-204ENST00000581979 XCL2Q9UBD3 114 aa9.18□□□□□ -0.94
SRSF1-204ENST00000581979 TRGV11A0A075B6L2 103 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 C5orf52A6NGY3 159 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 M0R381 172 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 RNASE3P12724 160 aaKnown RBP9.17□□□□□ -0.94
SRSF1-204ENST00000581979 HTN1P15515 57 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 RPL35AP18077 110 aaKnown RBP9.17□□□□□ -0.94
SRSF1-204ENST00000581979 SBSPONQ8IVN8 264 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 Q8N1Y9 231 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 DEFB125Q8N687 156 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 LINC01587Q99440 93 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 IGHV4-4A0A075B6R2 117 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 LOC102724200A0A096LPH7 203 aaPredicted RBP9.17□□□□□ -0.94
SRSF1-204ENST00000581979 IGHV3-16A0A0C4DH30 117 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 SPRY2O43597 315 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 SMIM15Q7Z3B0 74 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 SCRT2Q9NQ03 307 aa9.17□□□□□ -0.94
SRSF1-204ENST00000581979 HUWE1Q7Z6Z7 4374 aaKnown RBP9.16□□□□□ -0.94
SRSF1-204ENST00000581979 A8MZ25 164 aa9.16□□□□□ -0.94
SRSF1-204ENST00000581979 AMN1Q8IY45 258 aa9.16□□□□□ -0.94
SRSF1-204ENST00000581979 TMEM208Q9BTX3 173 aa9.16□□□□□ -0.94
SRSF1-204ENST00000581979 TMEM191AQ9H0A3 160 aa9.16□□□□□ -0.94
SRSF1-204ENST00000581979 FAM104BQ5XKR9 115 aa9.15□□□□□ -0.94
SRSF1-204ENST00000581979 MORN3Q6PF18 240 aaPredicted RBP9.15□□□□□ -0.94
SRSF1-204ENST00000581979 ALKBH7Q9BT30 221 aaPredicted RBP9.15□□□□□ -0.94
SRSF1-204ENST00000581979 MDFICQ9P1T7 246 aa9.15□□□□□ -0.94
SRSF1-204ENST00000581979 UBE2CO00762 179 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 HOXA5P20719 270 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 BAGE3Q86Y29 109 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 TMEM256Q8N2U0 113 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 C9orf85Q96MD7 179 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 IGHV3OR16-12A0A075B7B8 117 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 IGHV4-30-4P0DP06 118 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 Q0VG73 95 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 OR10J3Q5JRS4 329 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 RCHY1Q96PM5 261 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 LINC00467Q9BRT7 94 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 C1QTNF4Q9BXJ3 329 aa9.14□□□□□ -0.95
SRSF1-204ENST00000581979 C3orf84H3BNL1 204 aa9.13□□□□□ -0.95
SRSF1-204ENST00000581979 EVI2AP22794 236 aa9.13□□□□□ -0.95
SRSF1-204ENST00000581979 ZNF415Q09FC8 603 aa9.13□□□□□ -0.95
SRSF1-204ENST00000581979 MRPL51Q4U2R6 128 aaKnown RBP9.13□□□□□ -0.95
SRSF1-204ENST00000581979 PDZD11Q5EBL8 140 aa9.13□□□□□ -0.95
SRSF1-204ENST00000581979 COA6Q5JTJ3 125 aaKnown RBP9.13□□□□□ -0.95
SRSF1-204ENST00000581979 DMRTA1Q5VZB9 504 aa9.13□□□□□ -0.95
SRSF1-204ENST00000581979 C1orf158Q8N1D5 194 aa9.13□□□□□ -0.95
SRSF1-204ENST00000581979 SYT8Q8NBV8 401 aa9.13□□□□□ -0.95
SRSF1-204ENST00000581979 GOLT1BQ9Y3E0 138 aa9.13□□□□□ -0.95
SRSF1-204ENST00000581979 NXPH4O95158 308 aa9.12□□□□□ -0.95
SRSF1-204ENST00000581979 RAB4AP20338 218 aa9.12□□□□□ -0.95
SRSF1-204ENST00000581979 IQCJQ1A5X6 159 aa9.12□□□□□ -0.95
SRSF1-204ENST00000581979 C18orf32Q8TCD1 76 aa9.12□□□□□ -0.95
SRSF1-204ENST00000581979 RNF185Q96GF1 192 aa9.12□□□□□ -0.95
SRSF1-204ENST00000581979 TM2D3Q9BRN9 247 aa9.12□□□□□ -0.95
SRSF1-204ENST00000581979 ZMAT4Q9H898 229 aa9.12□□□□□ -0.95
SRSF1-204ENST00000581979 D6R8Y8 96 aa9.11□□□□□ -0.95
SRSF1-204ENST00000581979 PRM2P04554 102 aa9.11□□□□□ -0.95
SRSF1-204ENST00000581979 GIG44P09565 113 aaPredicted RBP9.11□□□□□ -0.95
SRSF1-204ENST00000581979 S100A2P29034 98 aa9.11□□□□□ -0.95
SRSF1-204ENST00000581979 CKS2P33552 79 aa9.11□□□□□ -0.95
SRSF1-204ENST00000581979 ORMDL3Q8N138 153 aa9.11□□□□□ -0.95
SRSF1-204ENST00000581979 HIST3H2BBQ8N257 126 aa9.11□□□□□ -0.95
SRSF1-204ENST00000581979 AP1S3Q96PC3 154 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms