RNA–Protein interactions for RNA: ENST00000581241.5

CSNK1D-217, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 6,094 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-217ENST00000581241 SEC16AO15027 2179 aa11.28□□□□□ -0.6
CSNK1D-217ENST00000581241 BRWD1Q9NSI6 2320 aa11.28□□□□□ -0.6
CSNK1D-217ENST00000581241 PRB1P04280 392 aa11.28□□□□□ -0.6
CSNK1D-217ENST00000581241 PIFOQ8TCI5 191 aa11.28□□□□□ -0.6
CSNK1D-217ENST00000581241 VPREB3Q9UKI3 123 aa11.28□□□□□ -0.6
CSNK1D-217ENST00000581241 ETDCA0A1B0GVM5 59 aa11.28□□□□□ -0.6
CSNK1D-217ENST00000581241 VSIG2Q96IQ7 327 aa11.28□□□□□ -0.6
CSNK1D-217ENST00000581241 CENPVL3A0A0U1RRI6 287 aa11.27□□□□□ -0.6
CSNK1D-217ENST00000581241 OPRPNQ99935 248 aaPredicted RBP11.27□□□□□ -0.6
CSNK1D-217ENST00000581241 PHF3Q92576 2039 aaKnown RBP11.27□□□□□ -0.6
CSNK1D-217ENST00000581241 IGHV7-81A0A0B4J1V7 117 aa11.27□□□□□ -0.6
CSNK1D-217ENST00000581241 TIMM17AQ99595 171 aa11.27□□□□□ -0.61
CSNK1D-217ENST00000581241 COX7A2LO14548 114 aa11.27□□□□□ -0.61
CSNK1D-217ENST00000581241 NCR3O14931 201 aa11.27□□□□□ -0.61
CSNK1D-217ENST00000581241 IGLV2-23P01705 113 aa11.27□□□□□ -0.61
CSNK1D-217ENST00000581241 PKIGQ9Y2B9 76 aa11.27□□□□□ -0.61
CSNK1D-217ENST00000581241 SNRNP200O75643 2136 aaKnown RBP11.27□□□□□ -0.61
CSNK1D-217ENST00000581241 RPL39P62891 51 aaKnown RBP11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 CLEC2BQ92478 149 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 ARHGEF17Q96PE2 2063 aaPredicted RBP11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 H3BT86 120 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 APRG1Q8IVJ8 170 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 JMJD7-PLA2G4BH0Y9G9 81 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 CHKB-CPT1BH3BT56 60 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 ODF1Q14990 250 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 DEFB112Q30KQ8 113 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 CTSGP08311 255 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 MP68P56378 58 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 HIST2H2BCQ6DN03 193 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 LYPD6Q86Y78 171 aa11.26□□□□□ -0.61
CSNK1D-217ENST00000581241 IGLV2-14P01704 120 aa11.25□□□□□ -0.61
CSNK1D-217ENST00000581241 DAND5Q8N907 189 aa11.25□□□□□ -0.61
CSNK1D-217ENST00000581241 CCL24O00175 119 aa11.25□□□□□ -0.61
CSNK1D-217ENST00000581241 IGKV1-17P01599 117 aa11.25□□□□□ -0.61
CSNK1D-217ENST00000581241 TANC1Q9C0D5 1861 aa11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 IGHV4-28A0A0C4DH34 117 aa11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 GYPEP15421 78 aa11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 CAMK2N2Q96S95 79 aa11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 IGHV4-59P01825 116 aa11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 NREPQ16612 68 aa11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 TTTY13Q9BZ97 58 aa11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 MRPL36Q9P0J6 103 aaKnown RBP11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 C11orf1Q9H5F2 150 aa11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 ATP5G1P05496 136 aa11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 SLURP1P55000 103 aa11.24□□□□□ -0.61
CSNK1D-217ENST00000581241 AJUBAQ96IF1 538 aa11.23□□□□□ -0.61
CSNK1D-217ENST00000581241 PRAC2D3DTV9 90 aa11.23□□□□□ -0.61
CSNK1D-217ENST00000581241 CRYGBP07316 175 aa11.23□□□□□ -0.61
CSNK1D-217ENST00000581241 RNF138Q8WVD3 245 aa11.23□□□□□ -0.61
CSNK1D-217ENST00000581241 DOCK11Q5JSL3 2073 aa11.23□□□□□ -0.61
CSNK1D-217ENST00000581241 TEX22C9J3V5 150 aa11.23□□□□□ -0.61
CSNK1D-217ENST00000581241 CGB7P0DN87 165 aa11.23□□□□□ -0.61
CSNK1D-217ENST00000581241 Q8N1Y9 231 aa11.22□□□□□ -0.61
CSNK1D-217ENST00000581241 C19orf71A6NCJ1 209 aa11.22□□□□□ -0.61
CSNK1D-217ENST00000581241 DEFB136Q30KP8 78 aa11.22□□□□□ -0.61
CSNK1D-217ENST00000581241 NFE4Q86UQ8 179 aa11.22□□□□□ -0.61
CSNK1D-217ENST00000581241 NDUFA11Q86Y39 141 aa11.22□□□□□ -0.61
CSNK1D-217ENST00000581241 IGHV1-58A0A0C4DH39 117 aa11.21□□□□□ -0.61
CSNK1D-217ENST00000581241 TIRAPP58753 221 aa11.21□□□□□ -0.61
CSNK1D-217ENST00000581241 PLA2G2CQ5R387 149 aa11.21□□□□□ -0.61
CSNK1D-217ENST00000581241 NUP210Q8TEM1 1887 aaPredicted RBP11.21□□□□□ -0.62
CSNK1D-217ENST00000581241 LECT2O14960 151 aa11.21□□□□□ -0.62
CSNK1D-217ENST00000581241 FRMD6-AS1P0C7T7 363 aa11.2□□□□□ -0.62
CSNK1D-217ENST00000581241 C5orf56Q8N8D9 126 aa11.2□□□□□ -0.62
CSNK1D-217ENST00000581241 TRBV7-3A0A075B6L6 115 aa11.2□□□□□ -0.62
CSNK1D-217ENST00000581241 ALPK2Q86TB3 2170 aa11.2□□□□□ -0.62
CSNK1D-217ENST00000581241 ODF3L1Q8IXM7 274 aa11.2□□□□□ -0.62
CSNK1D-217ENST00000581241 TCL1BO95988 128 aa11.2□□□□□ -0.62
CSNK1D-217ENST00000581241 CXCL5P42830 114 aa11.2□□□□□ -0.62
CSNK1D-217ENST00000581241 MRPL23Q16540 153 aaKnown RBP11.2□□□□□ -0.62
CSNK1D-217ENST00000581241 ZNF503Q96F45 646 aa11.2□□□□□ -0.62
CSNK1D-217ENST00000581241 TMEM256-PLSCR3K7ERE1 68 aa11.19□□□□□ -0.62
CSNK1D-217ENST00000581241 NDUFB1O75438 58 aa11.19□□□□□ -0.62
CSNK1D-217ENST00000581241 SPATA12Q7Z6I5 190 aa11.19□□□□□ -0.62
CSNK1D-217ENST00000581241 TNRC6AQ8NDV7 1962 aaKnown RBP11.19□□□□□ -0.62
CSNK1D-217ENST00000581241 PLXNB3Q9ULL4 1909 aa11.19□□□□□ -0.62
CSNK1D-217ENST00000581241 IGLV10-54A0A075B6I4 117 aa11.19□□□□□ -0.62
CSNK1D-217ENST00000581241 TRAV26-1A0A087WT03 109 aa11.19□□□□□ -0.62
CSNK1D-217ENST00000581241 Q8N9W7 124 aa11.19□□□□□ -0.62
CSNK1D-217ENST00000581241 Q9HAA7 133 aa11.19□□□□□ -0.62
CSNK1D-217ENST00000581241 ANAPC1Q9H1A4 1944 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 C9orf66Q5T8R8 295 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 CLPSL1A2RUU4 121 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 C2orf70A6NJV1 201 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 IGHV3-30P01768 117 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 IGHV3-33P01772 117 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 IGHV3-30-3P0DP02 117 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 IGHV3-30-5P0DP03 117 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 DKK4Q9UBT3 224 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 PRB2P02812 416 aaPredicted RBP11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 MIAQ16674 131 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 SPATA25Q9BR10 227 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 ZMAT4Q9H898 229 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 MDFICQ9P1T7 246 aa11.18□□□□□ -0.62
CSNK1D-217ENST00000581241 A0A1B0GXF2 115 aa11.17□□□□□ -0.62
CSNK1D-217ENST00000581241 K7EMT4 169 aa11.17□□□□□ -0.62
CSNK1D-217ENST00000581241 IGHV4-38-2P0DP08 117 aa11.17□□□□□ -0.62
CSNK1D-217ENST00000581241 NCKAP5O14513 1909 aa11.17□□□□□ -0.62
CSNK1D-217ENST00000581241 NDUFA1O15239 70 aa11.17□□□□□ -0.62
CSNK1D-217ENST00000581241 LINC00643Q86TS7 51 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms