RNA–Protein interactions for RNA: ENST00000578049.3

SEC22B-201, Transcript of SEC22 homolog B, vesicle trafficking protein (gene/pseudogene), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC22B, Length 6,922 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22B-201ENST00000578049 MED13LQ71F56 2210 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 CTSGP08311 255 aa8.38□□□□□ -1.07
SEC22B-201ENST00000578049 RUSC1-AS1Q66K80 236 aa8.37□□□□□ -1.07
SEC22B-201ENST00000578049 HOXD3P31249 432 aaPredicted RBP8.37□□□□□ -1.07
SEC22B-201ENST00000578049 MRPL23Q16540 153 aaKnown RBP8.37□□□□□ -1.07
SEC22B-201ENST00000578049 HELZP42694 1942 aaKnown RBP8.37□□□□□ -1.07
SEC22B-201ENST00000578049 CENPVL3A0A0U1RRI6 287 aa8.37□□□□□ -1.07
SEC22B-201ENST00000578049 APOC4P55056 127 aa8.37□□□□□ -1.07
SEC22B-201ENST00000578049 WFDC2Q14508 124 aa8.37□□□□□ -1.07
SEC22B-201ENST00000578049 C16orf54Q6UWD8 224 aa8.37□□□□□ -1.07
SEC22B-201ENST00000578049 ANAPC1Q9H1A4 1944 aa8.37□□□□□ -1.07
SEC22B-201ENST00000578049 IGHV3-16A0A0C4DH30 117 aa8.36□□□□□ -1.07
SEC22B-201ENST00000578049 LY6DQ14210 128 aa8.36□□□□□ -1.07
SEC22B-201ENST00000578049 TRAV12-2A0A075B6T6 113 aa8.36□□□□□ -1.07
SEC22B-201ENST00000578049 K7EMT4 169 aa8.36□□□□□ -1.07
SEC22B-201ENST00000578049 RBM3P98179 157 aaKnown RBP8.36□□□□□ -1.07
SEC22B-201ENST00000578049 PLA2G2CQ5R387 149 aa8.36□□□□□ -1.07
SEC22B-201ENST00000578049 F6UB75 175 aa8.36□□□□□ -1.07
SEC22B-201ENST00000578049 SUMO4Q6EEV6 95 aa8.36□□□□□ -1.07
SEC22B-201ENST00000578049 GNLYP22749 145 aa8.36□□□□□ -1.07
SEC22B-201ENST00000578049 DAZ2Q13117 558 aaKnown RBP8.36□□□□□ -1.07
SEC22B-201ENST00000578049 DAZ4Q86SG3 579 aaKnown RBP8.36□□□□□ -1.07
SEC22B-201ENST00000578049 MUSTN1Q8IVN3 82 aa8.36□□□□□ -1.07
SEC22B-201ENST00000578049 DAZ3Q9NR90 486 aaKnown RBP8.36□□□□□ -1.07
SEC22B-201ENST00000578049 CHD3Q12873 2000 aaKnown RBP8.35□□□□□ -1.07
SEC22B-201ENST00000578049 IGHV7-81A0A0B4J1V7 117 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 GNRH2O43555 120 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 NXPH4O95158 308 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 GATA1P15976 413 aaPredicted RBP8.35□□□□□ -1.07
SEC22B-201ENST00000578049 PDE6GP18545 87 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 A0A0J9YXV3 536 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 TMEM89A2RUT3 159 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 TNRC6AQ8NDV7 1962 aaKnown RBP8.35□□□□□ -1.07
SEC22B-201ENST00000578049 PKIGQ9Y2B9 76 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 MED13Q9UHV7 2174 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 IGHV3-38A0A0C4DH36 116 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 IGF2-ASQ6U949 168 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 UBE2DNLQ8IWF7 75 aa8.35□□□□□ -1.07
SEC22B-201ENST00000578049 IGLV2-14P01704 120 aa8.34□□□□□ -1.07
SEC22B-201ENST00000578049 IGKV1OR2-108A0A075B7D4 117 aa8.34□□□□□ -1.07
SEC22B-201ENST00000578049 IGLV1-47P01700 117 aa8.34□□□□□ -1.07
SEC22B-201ENST00000578049 F5H768 121 aa8.34□□□□□ -1.07
SEC22B-201ENST00000578049 LINC00574Q9H8X3 128 aa8.34□□□□□ -1.07
SEC22B-201ENST00000578049 SND1-IT1Q9HBX3 110 aa8.34□□□□□ -1.07
SEC22B-201ENST00000578049 OPRPNQ99935 248 aaPredicted RBP8.34□□□□□ -1.07
SEC22B-201ENST00000578049 PSCAO43653 123 aa8.33□□□□□ -1.08
SEC22B-201ENST00000578049 HOXB4P17483 251 aaPredicted RBP8.33□□□□□ -1.08
SEC22B-201ENST00000578049 LINC00643Q86TS7 51 aa8.33□□□□□ -1.08
SEC22B-201ENST00000578049 CXCL5P42830 114 aa8.33□□□□□ -1.08
SEC22B-201ENST00000578049 MSRB1Q9NZV6 116 aa8.33□□□□□ -1.08
SEC22B-201ENST00000578049 FUSP35637 526 aaKnown RBP eCLIP8.33□□□□□ -1.08
SEC22B-201ENST00000578049 BAALCQ8WXS3 180 aa8.33□□□□□ -1.08
SEC22B-201ENST00000578049 SS18L2Q9UHA2 77 aa8.33□□□□□ -1.08
SEC22B-201ENST00000578049 TINCRA0A1B0GVN0 87 aa8.33□□□□□ -1.08
SEC22B-201ENST00000578049 RPL39LQ96EH5 51 aaKnown RBP8.33□□□□□ -1.08
SEC22B-201ENST00000578049 TM2D2Q9BX73 214 aa8.33□□□□□ -1.08
SEC22B-201ENST00000578049 TEX22C9J3V5 150 aa8.33□□□□□ -1.08
SEC22B-201ENST00000578049 IGLV2-23P01705 113 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 MBD6Q96DN6 1003 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 U3KQE9 123 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 NDUFC2O95298 119 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 PLXND1Q9Y4D7 1925 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 FAM236AA0A1B0GUQ0 79 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 FAM236BA0A1B0GV22 79 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 hADV29S1A0JD25 119 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 YPEL4Q96NS1 127 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 TRAV25A0A0B4J276 109 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 TANC1Q9C0D5 1861 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 Q8N1Y9 231 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 MLST8Q9BVC4 326 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 VPREB3Q9UKI3 123 aa8.32□□□□□ -1.08
SEC22B-201ENST00000578049 NBL1P41271 181 aa8.31□□□□□ -1.08
SEC22B-201ENST00000578049 ANGP03950 147 aaKnown RBP8.31□□□□□ -1.08
SEC22B-201ENST00000578049 ASPHD1Q5U4P2 390 aa8.31□□□□□ -1.08
SEC22B-201ENST00000578049 A0A1B0GX51 115 aa8.31□□□□□ -1.08
SEC22B-201ENST00000578049 C20orf203Q8NBC4 194 aa8.31□□□□□ -1.08
SEC22B-201ENST00000578049 IGLV2-8P01709 118 aa8.3□□□□□ -1.08
SEC22B-201ENST00000578049 VSIG2Q96IQ7 327 aa8.3□□□□□ -1.08
SEC22B-201ENST00000578049 IGHV1-58A0A0C4DH39 117 aa8.3□□□□□ -1.08
SEC22B-201ENST00000578049 NDUFA11Q86Y39 141 aa8.3□□□□□ -1.08
SEC22B-201ENST00000578049 NACAE9PAV3 2078 aa8.3□□□□□ -1.08
SEC22B-201ENST00000578049 ODF3L1Q8IXM7 274 aa8.3□□□□□ -1.08
SEC22B-201ENST00000578049 MGAMO43451 1857 aa8.3□□□□□ -1.08
SEC22B-201ENST00000578049 ANKHD1Q8IWZ3 2542 aaKnown RBP8.3□□□□□ -1.08
SEC22B-201ENST00000578049 KMT2EQ8IZD2 1858 aa8.3□□□□□ -1.08
SEC22B-201ENST00000578049 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.3□□□□□ -1.08
SEC22B-201ENST00000578049 IGKV2-29A2NJV5 120 aaPredicted RBP8.3□□□□□ -1.08
SEC22B-201ENST00000578049 C16orf74Q96GX8 76 aa8.3□□□□□ -1.08
SEC22B-201ENST00000578049 TRAV4A0A0B4J268 109 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 LGALS9O00182 355 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 PSMB8P28062 276 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 PIP4P1Q86T03 277 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 K7EQD1 137 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 CGB3P0DN86 165 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 CGB7P0DN87 165 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 GPHB5Q86YW7 130 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 COX7B2Q8TF08 81 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 ZNF503Q96F45 646 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 Q8N9W7 124 aa8.29□□□□□ -1.08
SEC22B-201ENST00000578049 TRBV10-1A0A0K0K1A3 114 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms