RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 A8MWV9 139 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 GAGE1Q13065 139 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 GAGE4Q13068 117 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 GAGE5Q13069 117 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 GAGE13Q4V321 117 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 ZFP2Q6ZN57 461 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 CYB561D1Q8N8Q1 229 aa7.62□□□□□ -1.19
CTDNEP1-212ENST00000576613 A0A1W2PPV4 95 aa7.61□□□□□ -1.19
CTDNEP1-212ENST00000576613 K7EQM0 130 aa7.61□□□□□ -1.19
CTDNEP1-212ENST00000576613 GCGP01275 180 aa7.61□□□□□ -1.19
CTDNEP1-212ENST00000576613 IGLV2-11P01706 119 aa7.61□□□□□ -1.19
CTDNEP1-212ENST00000576613 LINC00694P0DN24 101 aa7.61□□□□□ -1.19
CTDNEP1-212ENST00000576613 FGF8P55075 233 aaPredicted RBP7.61□□□□□ -1.19
CTDNEP1-212ENST00000576613 GNG5P63218 68 aa7.61□□□□□ -1.19
CTDNEP1-212ENST00000576613 CYCSP99999 105 aaKnown RBP7.61□□□□□ -1.19
CTDNEP1-212ENST00000576613 PARLQ9H300 379 aa7.61□□□□□ -1.19
CTDNEP1-212ENST00000576613 C11orf21Q9P2W6 132 aa7.61□□□□□ -1.19
CTDNEP1-212ENST00000576613 H0YIZ8 118 aa7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 EIF3GO75821 320 aaKnown RBP eCLIP7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 SIX6O95475 246 aa7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 RNASE3P12724 160 aaKnown RBP7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 ZNF80P51504 273 aaPredicted RBP7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 RPL37AP61513 92 aaKnown RBP7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 ELOBQ15370 118 aa7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 C14orf177Q52M58 125 aa7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 PIK3CD-AS1Q5SR53 167 aa7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 KCNIP4Q6PIL6 250 aa7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 TMEM75Q8N9X5 138 aa7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 OR10G9Q8NGN4 311 aa7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 SGK494Q96LW2 274 aa7.6□□□□□ -1.19
CTDNEP1-212ENST00000576613 FAT3Q8TDW7 4589 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 A0A087WX48 190 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 PET100P0DJ07 73 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 S100A4P26447 101 aaKnown RBP7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 LGALSLQ3ZCW2 172 aaPredicted RBP7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 SMUG1Q53HV7 270 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 MZT2BQ6NZ67 158 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 NIT1Q86X76 327 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 C5orf17Q8NAS9 161 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 OR2T35Q8NGX2 323 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 UBE2WQ96B02 151 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 CHCHD7Q9BUK0 85 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 CCDC32Q9BV29 185 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 KLK12Q9UKR0 248 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 HSPB11Q9Y547 144 aa7.59□□□□□ -1.19
CTDNEP1-212ENST00000576613 TCRAP04437 139 aa7.58□□□□□ -1.2
CTDNEP1-212ENST00000576613 LINC00479Q96M42 142 aa7.58□□□□□ -1.2
CTDNEP1-212ENST00000576613 SMIM3Q9BZL3 60 aa7.58□□□□□ -1.2
CTDNEP1-212ENST00000576613 PSG8Q9UQ74 426 aa7.58□□□□□ -1.2
CTDNEP1-212ENST00000576613 RHODO00212 210 aa7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 HMGB3O15347 200 aaKnown RBP7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 ARL14EPLP0DKL9 152 aa7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 FLI1Q01543 452 aaPredicted RBP7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 Q0VG73 95 aa7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 ATRAIDQ6UW56 229 aa7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 PRNTQ86SH4 94 aa7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 C14orf178Q8N769 122 aaPredicted RBP7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 PPP1R1CQ8WVI7 109 aa7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 DNAJC30Q96LL9 226 aa7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 C1orf43Q9BWL3 253 aa7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 SAMD10Q9BYL1 202 aa7.57□□□□□ -1.2
CTDNEP1-212ENST00000576613 RPL12P30050 165 aaKnown RBP7.56□□□□□ -1.2
CTDNEP1-212ENST00000576613 ASIPP42127 132 aa7.56□□□□□ -1.2
CTDNEP1-212ENST00000576613 RAB2AP61019 212 aa7.56□□□□□ -1.2
CTDNEP1-212ENST00000576613 SAPCD1Q5SSQ6 148 aa7.56□□□□□ -1.2
CTDNEP1-212ENST00000576613 DMRTA1Q5VZB9 504 aa7.56□□□□□ -1.2
CTDNEP1-212ENST00000576613 OR10G7Q8NGN6 311 aa7.56□□□□□ -1.2
CTDNEP1-212ENST00000576613 Q9UF83 564 aa7.56□□□□□ -1.2
CTDNEP1-212ENST00000576613 CRPP02741 224 aa7.55□□□□□ -1.2
CTDNEP1-212ENST00000576613 UFSP1Q6NVU6 142 aa7.55□□□□□ -1.2
CTDNEP1-212ENST00000576613 OR2G3Q8NGZ4 309 aa7.55□□□□□ -1.2
CTDNEP1-212ENST00000576613 ENKURQ8TC29 256 aa7.55□□□□□ -1.2
CTDNEP1-212ENST00000576613 IL36BQ9NZH7 164 aa7.55□□□□□ -1.2
CTDNEP1-212ENST00000576613 IGKV3D-20A0A0C4DH25 116 aa7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 MPC2O95563 127 aa7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 CDC34P49427 236 aaPredicted RBP7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 HNRNPA3P51991 378 aaKnown RBP7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 H2BFSP57053 126 aa7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 SUMO1P63165 101 aaKnown RBP7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 FAM74A4Q5TZK3 123 aa7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 DAZAP1Q96EP5 407 aaKnown RBP7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 JPT2Q9H910 190 aa7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 EPDR1Q9UM22 224 aa7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 PKHD1L1Q86WI1 4243 aa7.54□□□□□ -1.2
CTDNEP1-212ENST00000576613 FABP5P3A8MUU1 101 aa7.53□□□□□ -1.2
CTDNEP1-212ENST00000576613 H3BVH4 76 aa7.53□□□□□ -1.2
CTDNEP1-212ENST00000576613 STAG3L2P0CL84 134 aa7.53□□□□□ -1.2
CTDNEP1-212ENST00000576613 STAG3L3P0CL85 134 aa7.53□□□□□ -1.2
CTDNEP1-212ENST00000576613 OR11H4Q8NGC9 324 aa7.53□□□□□ -1.2
CTDNEP1-212ENST00000576613 TMEM167BQ9NRX6 74 aa7.53□□□□□ -1.2
CTDNEP1-212ENST00000576613 TRBV10-1A0A0K0K1A3 114 aa7.52□□□□□ -1.21
CTDNEP1-212ENST00000576613 B4DEV8 164 aa7.52□□□□□ -1.21
CTDNEP1-212ENST00000576613 TMEM262E9PQX1 116 aa7.52□□□□□ -1.21
CTDNEP1-212ENST00000576613 GCHFRP30047 84 aa7.52□□□□□ -1.21
CTDNEP1-212ENST00000576613 RPL36AP83881 106 aaKnown RBP7.52□□□□□ -1.21
CTDNEP1-212ENST00000576613 DGAT2L7PQ6IED9 249 aa7.52□□□□□ -1.21
CTDNEP1-212ENST00000576613 SUN5Q8TC36 379 aa7.52□□□□□ -1.21
CTDNEP1-212ENST00000576613 RPL36ALQ969Q0 106 aaKnown RBP7.52□□□□□ -1.21
CTDNEP1-212ENST00000576613 RAB24Q969Q5 203 aa7.52□□□□□ -1.21
CTDNEP1-212ENST00000576613 WFDC1Q9HC57 220 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms