RNA–Protein interactions for RNA: ENST00000574875.1

ABR-231, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 2

Gene ABR, Length 239 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-231	ENST00000574875	FAM231B	A6NCW3	169 aa		13.78	□□□□□ -0.2
ABR-231	ENST00000574875		A8MWL6	223 aa		13.78	□□□□□ -0.2
ABR-231	ENST00000574875	NPIPB6	E9PJ23	425 aa		13.78	□□□□□ -0.2
ABR-231	ENST00000574875	DEFB130B	P0DP73	79 aa		13.78	□□□□□ -0.2
ABR-231	ENST00000574875	DEFB130A	P0DP74	79 aa		13.78	□□□□□ -0.2
ABR-231	ENST00000574875	LEP	P41159	167 aa		13.78	□□□□□ -0.2
ABR-231	ENST00000574875	ZNF493	Q6ZR52	646 aa		13.78	□□□□□ -0.2
ABR-231	ENST00000574875	POM121L12	Q8N7R1	296 aa		13.78	□□□□□ -0.2
ABR-231	ENST00000574875	TSKU	Q8WUA8	353 aa		13.78	□□□□□ -0.2
ABR-231	ENST00000574875	C16orf74	Q96GX8	76 aa		13.78	□□□□□ -0.2
ABR-231	ENST00000574875		J3KRW8	73 aa		13.77	□□□□□ -0.21
ABR-231	ENST00000574875	GFI1B	Q5VTD9	330 aa		13.77	□□□□□ -0.21
ABR-231	ENST00000574875	C9orf47	Q6ZRZ4	202 aa		13.77	□□□□□ -0.21
ABR-231	ENST00000574875	ZC2HC1A	Q96GY0	325 aa		13.77	□□□□□ -0.21
ABR-231	ENST00000574875	ODF3	Q96PU9	254 aa		13.77	□□□□□ -0.21
ABR-231	ENST00000574875	GFRA4	Q9GZZ7	299 aa		13.77	□□□□□ -0.21
ABR-231	ENST00000574875	TMEM78	Q5T7P6	136 aa		13.76	□□□□□ -0.21
ABR-231	ENST00000574875	LINC00477	Q96M19	166 aa		13.76	□□□□□ -0.21
ABR-231	ENST00000574875	VGLL1	Q99990	258 aa		13.76	□□□□□ -0.21
ABR-231	ENST00000574875	NAT8B	Q9UHF3	227 aa		13.76	□□□□□ -0.21
ABR-231	ENST00000574875	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	13.76	□□□□□ -0.21
ABR-231	ENST00000574875	LENEP	Q9Y5L5	61 aa		13.76	□□□□□ -0.21
ABR-231	ENST00000574875	TRAV12-3	A0A0B4J271	114 aa		13.75	□□□□□ -0.21
ABR-231	ENST00000574875	ERCC8	Q13216	396 aa		13.75	□□□□□ -0.21
ABR-231	ENST00000574875	SMUG1	Q53HV7	270 aa		13.75	□□□□□ -0.21
ABR-231	ENST00000574875	RASL11A	Q6T310	242 aa		13.75	□□□□□ -0.21
ABR-231	ENST00000574875	TMEM263	Q8WUH6	116 aa	Known RBP	13.75	□□□□□ -0.21
ABR-231	ENST00000574875	LOC105371267	A0A1B0GV96	52 aa		13.74	□□□□□ -0.21
ABR-231	ENST00000574875	CBY3	A6NI87	242 aa		13.74	□□□□□ -0.21
ABR-231	ENST00000574875	TRGC2	P03986	189 aa		13.74	□□□□□ -0.21
ABR-231	ENST00000574875	ZNF138	P52744	262 aa		13.74	□□□□□ -0.21
ABR-231	ENST00000574875	FAM162B	Q5T6X4	162 aa		13.74	□□□□□ -0.21
ABR-231	ENST00000574875	RNASE8	Q8TDE3	154 aa	Known RBP	13.74	□□□□□ -0.21
ABR-231	ENST00000574875	AGPAT4-IT1	Q9H0P7	198 aa		13.74	□□□□□ -0.21
ABR-231	ENST00000574875	NOP10	Q9NPE3	64 aa	Known RBP	13.74	□□□□□ -0.21
ABR-231	ENST00000574875	S100A6	P06703	90 aa		13.73	□□□□□ -0.21
ABR-231	ENST00000574875	WDR73	Q6P4I2	378 aa		13.73	□□□□□ -0.21
ABR-231	ENST00000574875	ZFP82	Q8N141	532 aa		13.73	□□□□□ -0.21
ABR-231	ENST00000574875	DNAH6	Q9C0G6	4158 aa		13.73	□□□□□ -0.21
ABR-231	ENST00000574875	XKRY2	A2RUG3	117 aa		13.72	□□□□□ -0.21
ABR-231	ENST00000574875	MT-ND6	P03923	174 aa		13.72	□□□□□ -0.21
ABR-231	ENST00000574875	ATP5G1	P05496	136 aa		13.72	□□□□□ -0.21
ABR-231	ENST00000574875	ATP5L2	Q7Z4Y8	100 aa		13.72	□□□□□ -0.21
ABR-231	ENST00000574875	OR2D3	Q8NGH3	330 aa		13.72	□□□□□ -0.21
ABR-231	ENST00000574875	C8orf49	Q96NF6	230 aa		13.72	□□□□□ -0.21
ABR-231	ENST00000574875	DNAH10	Q8IVF4	4471 aa		13.72	□□□□□ -0.21
ABR-231	ENST00000574875	TRBV7-9	A0A0J9YWB2	115 aa		13.71	□□□□□ -0.21
ABR-231	ENST00000574875		F5H768	121 aa		13.71	□□□□□ -0.21
ABR-231	ENST00000574875	TCL1A	P56279	114 aa		13.71	□□□□□ -0.21
ABR-231	ENST00000574875	RPS20	P60866	119 aa	Known RBP	13.71	□□□□□ -0.21
ABR-231	ENST00000574875		Q6AWC8	147 aa		13.71	□□□□□ -0.21
ABR-231	ENST00000574875	UBE2DNL	Q8IWF7	75 aa		13.71	□□□□□ -0.21
ABR-231	ENST00000574875	FAM19A4	Q96LR4	140 aa		13.71	□□□□□ -0.21
ABR-231	ENST00000574875	GNB1L	Q9BYB4	327 aa		13.71	□□□□□ -0.21
ABR-231	ENST00000574875	TRAPPC1	Q9Y5R8	145 aa		13.71	□□□□□ -0.21
ABR-231	ENST00000574875	C7orf71	A4D174	169 aa		13.7	□□□□□ -0.22
ABR-231	ENST00000574875	PHOX2A	O14813	284 aa		13.7	□□□□□ -0.22
ABR-231	ENST00000574875	CRIP1	P50238	77 aa		13.7	□□□□□ -0.22
ABR-231	ENST00000574875	C15orf53	Q8NAA6	179 aa		13.7	□□□□□ -0.22
ABR-231	ENST00000574875	NUP35	Q8NFH5	326 aa		13.7	□□□□□ -0.22
ABR-231	ENST00000574875		Q8TAT8	98 aa		13.7	□□□□□ -0.22
ABR-231	ENST00000574875	FABP5P3	A8MUU1	101 aa		13.69	□□□□□ -0.22
ABR-231	ENST00000574875	HIGD1C	A8MV81	97 aa		13.69	□□□□□ -0.22
ABR-231	ENST00000574875	SNURFL	B1AK76	121 aa		13.69	□□□□□ -0.22
ABR-231	ENST00000574875	KLLN	B2CW77	178 aa		13.69	□□□□□ -0.22
ABR-231	ENST00000574875	SH2D1A	O60880	128 aa		13.69	□□□□□ -0.22
ABR-231	ENST00000574875	GPX1	P07203	203 aa		13.69	□□□□□ -0.22
ABR-231	ENST00000574875	RNASE4	P34096	147 aa	Known RBP	13.69	□□□□□ -0.22
ABR-231	ENST00000574875	FOXA3	P55318	350 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-231	ENST00000574875	FRAS1	Q86XX4	4008 aa		13.68	□□□□□ -0.22
ABR-231	ENST00000574875	ZNF324	O75467	553 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-231	ENST00000574875	TRGC1	P0CF51	173 aa		13.68	□□□□□ -0.22
ABR-231	ENST00000574875	CRISP2	P16562	243 aa		13.68	□□□□□ -0.22
ABR-231	ENST00000574875	FRZB	Q92765	325 aa		13.68	□□□□□ -0.22
ABR-231	ENST00000574875		M0R2N4	97 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST1H2BK	O60814	126 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HLA-DQA1	P01909	254 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST1H2BJ	P06899	126 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST1H2BO	P23527	126 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST1H2BB	P33778	126 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST1H2BD	P58876	126 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST1H2BC	P62807	126 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	FABP9	Q0Z7S8	132 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST2H2BE	Q16778	126 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST1H2BH	Q93079	126 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST1H2BN	Q99877	126 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	HIST1H2BM	Q99879	126 aa		13.67	□□□□□ -0.22
ABR-231	ENST00000574875	LINC00612	Q8N6U2	182 aa		13.66	□□□□□ -0.22
ABR-231	ENST00000574875	GTSF1	Q8WW33	167 aa		13.66	□□□□□ -0.22
ABR-231	ENST00000574875		A0A1B0GW15	77 aa		13.65	□□□□□ -0.22
ABR-231	ENST00000574875	GAGE12B	A1L429	117 aa		13.65	□□□□□ -0.22
ABR-231	ENST00000574875	C5orf52	A6NGY3	159 aa		13.65	□□□□□ -0.22
ABR-231	ENST00000574875	GAGE7	O76087	117 aa		13.65	□□□□□ -0.22
ABR-231	ENST00000574875	S100A8	P05109	93 aa		13.65	□□□□□ -0.22
ABR-231	ENST00000574875	GAGE12F	P0CL80	117 aa		13.65	□□□□□ -0.22
ABR-231	ENST00000574875	GAGE12G	P0CL81	117 aa		13.65	□□□□□ -0.22
ABR-231	ENST00000574875	GAGE12I	P0CL82	117 aa		13.65	□□□□□ -0.22
ABR-231	ENST00000574875	DAZ2	Q13117	558 aa	Known RBP	13.65	□□□□□ -0.22
ABR-231	ENST00000574875	LGALS9B	Q3B8N2	356 aa		13.65	□□□□□ -0.22

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