RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 RNASE3P12724 160 aaKnown RBP8.17□□□□□ -1.1
KARS-207ENST00000566560 ERVFC1-1P60608 527 aa8.17□□□□□ -1.1
KARS-207ENST00000566560 RPS20P60866 119 aaKnown RBP8.17□□□□□ -1.1
KARS-207ENST00000566560 RPL23P62829 140 aaKnown RBP8.17□□□□□ -1.1
KARS-207ENST00000566560 Q6ZTI0 123 aa8.17□□□□□ -1.1
KARS-207ENST00000566560 NUDT10Q8NFP7 164 aa8.17□□□□□ -1.1
KARS-207ENST00000566560 NUDT11Q96G61 164 aa8.17□□□□□ -1.1
KARS-207ENST00000566560 C9orf85Q96MD7 179 aa8.17□□□□□ -1.1
KARS-207ENST00000566560 SPXQ9BT56 116 aa8.17□□□□□ -1.1
KARS-207ENST00000566560 RPP21Q9H633 154 aaKnown RBP8.17□□□□□ -1.1
KARS-207ENST00000566560 GAGE12BA1L429 117 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 XKRY2A2RUG3 117 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 M0R2P5 195 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 GAGE7O76087 117 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 GAGE12FP0CL80 117 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 GAGE12GP0CL81 117 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 GAGE12IP0CL82 117 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 C12orf74Q32Q52 190 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 DNLZQ5SXM8 178 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 Q6ZTC4 211 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 FAM231DQ6ZW35 169 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 LINC00612Q8N6U2 182 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 ISOC2Q96AB3 205 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 MUC4Q99102 2169 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 IL36BQ9NZH7 164 aa8.16□□□□□ -1.1
KARS-207ENST00000566560 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.16□□□□□ -1.1
KARS-207ENST00000566560 TRGV2A0A075B6R0 118 aa8.15□□□□□ -1.1
KARS-207ENST00000566560 TMEM218A2RU14 115 aa8.15□□□□□ -1.1
KARS-207ENST00000566560 GATCO43716 136 aaKnown RBP8.15□□□□□ -1.1
KARS-207ENST00000566560 ARMS2P0C7Q2 107 aa8.15□□□□□ -1.1
KARS-207ENST00000566560 MED14OSP0DP75 135 aa8.15□□□□□ -1.1
KARS-207ENST00000566560 GZMBP10144 247 aa8.15□□□□□ -1.1
KARS-207ENST00000566560 ADCYAP1P18509 176 aa8.15□□□□□ -1.1
KARS-207ENST00000566560 LGALS9BQ3B8N2 356 aa8.15□□□□□ -1.1
KARS-207ENST00000566560 MUC7Q8TAX7 377 aa8.15□□□□□ -1.1
KARS-207ENST00000566560 F8W036 122 aa8.14□□□□□ -1.11
KARS-207ENST00000566560 PNRC1Q12796 327 aaPredicted RBP8.14□□□□□ -1.11
KARS-207ENST00000566560 CT83Q5H943 113 aa8.14□□□□□ -1.11
KARS-207ENST00000566560 C15orf54Q8N8G6 183 aa8.14□□□□□ -1.11
KARS-207ENST00000566560 SFRP2Q96HF1 295 aa8.14□□□□□ -1.11
KARS-207ENST00000566560 TPPP3Q9BW30 176 aa8.14□□□□□ -1.11
KARS-207ENST00000566560 OSTCQ9NRP0 149 aa8.14□□□□□ -1.11
KARS-207ENST00000566560 PHLDA3Q9Y5J5 127 aa8.14□□□□□ -1.11
KARS-207ENST00000566560 TRAV10A0A0B4J240 114 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 M0R381 172 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 ATP5G1P05496 136 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 HTN3P15516 51 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 ZNF876PQ49A33 203 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 ZNF575Q86XF7 245 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 ZFP82Q8N141 532 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 FER1L6-AS1Q8NA97 138 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 SYT8Q8NBV8 401 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 PHLDA1Q8WV24 401 aaPredicted RBP8.13□□□□□ -1.11
KARS-207ENST00000566560 RASL10AQ92737 203 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 SEC11CQ9BY50 192 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 CDIP1Q9H305 208 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 SCRT2Q9NQ03 307 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 NACAE9PAV3 2078 aa8.13□□□□□ -1.11
KARS-207ENST00000566560 NUPR2A6NF83 97 aa8.12□□□□□ -1.11
KARS-207ENST00000566560 SNAI2O43623 268 aa8.12□□□□□ -1.11
KARS-207ENST00000566560 OR5AL1P0C617 328 aa8.12□□□□□ -1.11
KARS-207ENST00000566560 IGLC6P0CF74 106 aa8.12□□□□□ -1.11
KARS-207ENST00000566560 ZFAND6Q6FIF0 208 aa8.12□□□□□ -1.11
KARS-207ENST00000566560 OR10G8Q8NGN5 311 aa8.12□□□□□ -1.11
KARS-207ENST00000566560 OR10AG1Q8NH19 301 aa8.12□□□□□ -1.11
KARS-207ENST00000566560 C18orf15Q96N68 181 aa8.12□□□□□ -1.11
KARS-207ENST00000566560 V9GYV3 84 aa8.12□□□□□ -1.11
KARS-207ENST00000566560 DEFB131BA0A096LNP1 70 aa8.11□□□□□ -1.11
KARS-207ENST00000566560 A0A1W2PPQ1 181 aa8.11□□□□□ -1.11
KARS-207ENST00000566560 A8MWL6 223 aa8.11□□□□□ -1.11
KARS-207ENST00000566560 IGHV3-53P01767 116 aa8.11□□□□□ -1.11
KARS-207ENST00000566560 CTRLP40313 264 aa8.11□□□□□ -1.11
KARS-207ENST00000566560 PTH2Q96A98 100 aa8.11□□□□□ -1.11
KARS-207ENST00000566560 NDUFAF3Q9BU61 184 aa8.11□□□□□ -1.11
KARS-207ENST00000566560 TRAV4A0A0B4J268 109 aa8.1□□□□□ -1.11
KARS-207ENST00000566560 MUC21A0A0G2JKD1 596 aa8.1□□□□□ -1.11
KARS-207ENST00000566560 MUC21A0A140T8X8 626 aa8.1□□□□□ -1.11
KARS-207ENST00000566560 F5H768 121 aa8.1□□□□□ -1.11
KARS-207ENST00000566560 NXPH4O95158 308 aa8.1□□□□□ -1.11
KARS-207ENST00000566560 PIK3CD-AS1Q5SR53 167 aa8.1□□□□□ -1.11
KARS-207ENST00000566560 SPANXN1Q5VSR9 72 aa8.1□□□□□ -1.11
KARS-207ENST00000566560 TSKUQ8WUA8 353 aa8.1□□□□□ -1.11
KARS-207ENST00000566560 GTSF1Q8WW33 167 aa8.1□□□□□ -1.11
KARS-207ENST00000566560 A8MWV9 139 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 F2Z2F3 143 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 C3orf84H3BNL1 204 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 PPP1R2P9O14990 202 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 SSTP61278 116 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 CACNG7P62955 275 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 RNF212Q495C1 297 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 CFAP126Q5VTH2 177 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 CEMP1Q6PRD7 247 aaPredicted RBP8.09□□□□□ -1.11
KARS-207ENST00000566560 LYZL1Q6UWQ5 148 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 OR4C5Q8NGB2 326 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 ZNF479Q96JC4 524 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 GFRA4Q9GZZ7 299 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 CARHSP1Q9Y2V2 147 aaKnown RBP8.09□□□□□ -1.11
KARS-207ENST00000566560 DNAH7Q8WXX0 4024 aa8.09□□□□□ -1.11
KARS-207ENST00000566560 HIGD1CA8MV81 97 aa8.08□□□□□ -1.12
KARS-207ENST00000566560 RS1O15537 224 aa8.08□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 171.3 ms