RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 DIRC3C9JPN6 131 aa8.61□□□□□ -1.03
RNF40-208ENST00000565995 CRYBA4P53673 196 aa8.61□□□□□ -1.03
RNF40-208ENST00000565995 MRPL23Q16540 153 aaKnown RBP8.61□□□□□ -1.03
RNF40-208ENST00000565995 ZNF674Q2M3X9 581 aa8.61□□□□□ -1.03
RNF40-208ENST00000565995 FAM19A4Q96LR4 140 aa8.61□□□□□ -1.03
RNF40-208ENST00000565995 LY96Q9Y6Y9 160 aa8.61□□□□□ -1.03
RNF40-208ENST00000565995 SERTM2A0A1B0GWG4 89 aa8.6□□□□□ -1.03
RNF40-208ENST00000565995 TCL1AP56279 114 aa8.6□□□□□ -1.03
RNF40-208ENST00000565995 SRSF3P84103 164 aaKnown RBP8.6□□□□□ -1.03
RNF40-208ENST00000565995 IBA57Q5T440 356 aaKnown RBP8.6□□□□□ -1.03
RNF40-208ENST00000565995 TMEM78Q5T7P6 136 aa8.6□□□□□ -1.03
RNF40-208ENST00000565995 NEGR1Q7Z3B1 354 aa8.6□□□□□ -1.03
RNF40-208ENST00000565995 EIF4E3Q8N5X7 224 aaKnown RBP8.6□□□□□ -1.03
RNF40-208ENST00000565995 NTN5Q8WTR8 489 aaPredicted RBP8.6□□□□□ -1.03
RNF40-208ENST00000565995 SGK494Q96LW2 274 aa8.6□□□□□ -1.03
RNF40-208ENST00000565995 TRGV1A0A0A0MS02 117 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 TRAV8-1A0A0A6YYK1 113 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 TRAV34A0A0B4J273 112 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 C7orf71A4D174 169 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 LRCOL1A6NCL2 159 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 TMEM250H0YL14 139 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 SRP19P09132 144 aaKnown RBP8.59□□□□□ -1.03
RNF40-208ENST00000565995 SFTA3P0C7M3 94 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 FHL2Q14192 279 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 NDUFA5Q16718 116 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 UQCC3Q6UW78 93 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 Q8TAT8 98 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 C11orf52Q96A22 123 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 FMC1Q96HJ9 113 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 VGLL1Q99990 258 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 NDFIP1Q9BT67 221 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 SMDT1Q9H4I9 107 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 HHLA3Q9XRX5 114 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 KLF12Q9Y4X4 402 aa8.59□□□□□ -1.03
RNF40-208ENST00000565995 RBAKDNA6NC62 111 aa8.58□□□□□ -1.04
RNF40-208ENST00000565995 J3KRW8 73 aa8.58□□□□□ -1.04
RNF40-208ENST00000565995 EVI2AP22794 236 aa8.58□□□□□ -1.04
RNF40-208ENST00000565995 FLI1Q01543 452 aaPredicted RBP8.58□□□□□ -1.04
RNF40-208ENST00000565995 ERCC8Q13216 396 aa8.58□□□□□ -1.04
RNF40-208ENST00000565995 PRNTQ86SH4 94 aa8.58□□□□□ -1.04
RNF40-208ENST00000565995 Q86TA4 180 aa8.58□□□□□ -1.04
RNF40-208ENST00000565995 ARL6IP6Q8N6S5 226 aa8.58□□□□□ -1.04
RNF40-208ENST00000565995 TMEM75Q8N9X5 138 aa8.58□□□□□ -1.04
RNF40-208ENST00000565995 LINC00479Q96M42 142 aa8.58□□□□□ -1.04
RNF40-208ENST00000565995 DERL1Q9BUN8 251 aa8.58□□□□□ -1.04
RNF40-208ENST00000565995 LRP1Q07954 4544 aaKnown RBP8.58□□□□□ -1.04
RNF40-208ENST00000565995 CRISP2P16562 243 aa8.57□□□□□ -1.04
RNF40-208ENST00000565995 RPL35P42766 123 aaKnown RBP8.57□□□□□ -1.04
RNF40-208ENST00000565995 SERTAD4-AS1Q5TG53 156 aa8.57□□□□□ -1.04
RNF40-208ENST00000565995 LINC00477Q96M19 166 aa8.57□□□□□ -1.04
RNF40-208ENST00000565995 SMIM7Q9BQ49 75 aa8.57□□□□□ -1.04
RNF40-208ENST00000565995 PARLQ9H300 379 aa8.57□□□□□ -1.04
RNF40-208ENST00000565995 PSG8Q9UQ74 426 aa8.57□□□□□ -1.04
RNF40-208ENST00000565995 UBR4Q5T4S7 5183 aa8.57□□□□□ -1.04
RNF40-208ENST00000565995 HMCN2Q8NDA2 5059 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 IGLV5-52A0A0A0MRZ9 124 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 FBLL1A6NHQ2 334 aaKnown RBP8.56□□□□□ -1.04
RNF40-208ENST00000565995 ZNF727A8MUV8 499 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 C9JQL5 133 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 K7EQD1 137 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 S100A9P06702 114 aaKnown RBP8.56□□□□□ -1.04
RNF40-208ENST00000565995 GNG4P50150 75 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 ZNF138P52744 262 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 TMEM183BQ1AE95 376 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 CENPWQ5EE01 88 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 C9orf47Q6ZRZ4 202 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 WFDC10BQ8IUB3 73 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 SLC7A5P1Q8MH63 180 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 C10orf126Q8N4M7 172 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 AGPAT4-IT1Q9H0P7 198 aa8.56□□□□□ -1.04
RNF40-208ENST00000565995 NDUFS6O75380 124 aaKnown RBP8.55□□□□□ -1.04
RNF40-208ENST00000565995 PLA2G1BP04054 148 aaKnown RBP8.55□□□□□ -1.04
RNF40-208ENST00000565995 HAMPP81172 84 aa8.55□□□□□ -1.04
RNF40-208ENST00000565995 NHLRC2Q8NBF2 726 aa8.55□□□□□ -1.04
RNF40-208ENST00000565995 C8orf49Q96NF6 230 aa8.55□□□□□ -1.04
RNF40-208ENST00000565995 FAM30AQ9NZY2 134 aa8.55□□□□□ -1.04
RNF40-208ENST00000565995 ZNF492Q9P255 531 aa8.55□□□□□ -1.04
RNF40-208ENST00000565995 F8W036 122 aa8.54□□□□□ -1.04
RNF40-208ENST00000565995 IGLV2-11P01706 119 aa8.54□□□□□ -1.04
RNF40-208ENST00000565995 CRYGDP07320 174 aa8.54□□□□□ -1.04
RNF40-208ENST00000565995 MGST1P10620 155 aaKnown RBP8.54□□□□□ -1.04
RNF40-208ENST00000565995 ZNF415Q09FC8 603 aa8.54□□□□□ -1.04
RNF40-208ENST00000565995 BTN1A1Q13410 526 aa8.54□□□□□ -1.04
RNF40-208ENST00000565995 Q6ZSA8 131 aa8.54□□□□□ -1.04
RNF40-208ENST00000565995 BAGE2Q86Y30 109 aa8.54□□□□□ -1.04
RNF40-208ENST00000565995 DEFB104AQ8WTQ1 72 aa8.54□□□□□ -1.04
RNF40-208ENST00000565995 TP53TG3Q9ULZ0 132 aa8.54□□□□□ -1.04
RNF40-208ENST00000565995 FAT3Q8TDW7 4589 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 IGHV1OR15-1A0A075B7D0 117 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 TMEM218A2RU14 115 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 PGPEP1LA6NFU8 196 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 LTAP01374 205 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 IGHV3-53P01767 116 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 ORM1P02763 201 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 GPX1P07203 203 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 SRIP30626 198 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 RNASE4P34096 147 aaKnown RBP8.53□□□□□ -1.04
RNF40-208ENST00000565995 FAM74A3Q4VXF1 159 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 SAPCD1Q5SSQ6 148 aa8.53□□□□□ -1.04
RNF40-208ENST00000565995 PRR27Q6MZM9 219 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms