RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 CFAP126Q5VTH2 177 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 WFDC10BQ8IUB3 73 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 CYB561D1Q8N8Q1 229 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 SLC25A29Q8N8R3 303 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 NHLRC2Q8NBF2 726 aa8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 NKX6-2Q9C056 277 aaPredicted RBP8.24□□□□□ -1.09
GTF3C1-204ENST00000564664 IGLV2-11P01706 119 aa8.23□□□□□ -1.09
GTF3C1-204ENST00000564664 MGST1P10620 155 aaKnown RBP8.23□□□□□ -1.09
GTF3C1-204ENST00000564664 ZNF80P51504 273 aaPredicted RBP8.23□□□□□ -1.09
GTF3C1-204ENST00000564664 SGK494Q96LW2 274 aa8.23□□□□□ -1.09
GTF3C1-204ENST00000564664 C9orf85Q96MD7 179 aa8.23□□□□□ -1.09
GTF3C1-204ENST00000564664 FABP5P3A8MUU1 101 aa8.22□□□□□ -1.09
GTF3C1-204ENST00000564664 IBA57-AS1B1ANH7 110 aa8.22□□□□□ -1.09
GTF3C1-204ENST00000564664 G3V3Q6 166 aa8.22□□□□□ -1.09
GTF3C1-204ENST00000564664 ZFP2Q6ZN57 461 aa8.22□□□□□ -1.09
GTF3C1-204ENST00000564664 PRNTQ86SH4 94 aa8.22□□□□□ -1.09
GTF3C1-204ENST00000564664 C11orf21Q9P2W6 132 aa8.22□□□□□ -1.09
GTF3C1-204ENST00000564664 LOC100131303A0A0U1RQF7 123 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 LINC00862A6NCI5 91 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 A8MWV9 139 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 EPM2AB3EWF7 344 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 GGTLC3B5MD39 225 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 IFNA7P01567 189 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 LGALSLQ3ZCW2 172 aaPredicted RBP8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 LELP1Q5T871 98 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 TEX261Q6UWH6 196 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 OR11H4Q8NGC9 324 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 OR2T35Q8NGX2 323 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 NTN5Q8WTR8 489 aaPredicted RBP8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 HIST1H2BAQ96A08 127 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 GTSF1LQ9H1H1 148 aa8.21□□□□□ -1.1
GTF3C1-204ENST00000564664 CTXND1A0A1B0GTU2 59 aa8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 PGPEP1LA6NFU8 196 aa8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 PSCAO43653 123 aa8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 RNASE3P12724 160 aaKnown RBP8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 GCSHP23434 173 aa8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 S100A4P26447 101 aaKnown RBP8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 XGP55808 180 aa8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 OR10J3Q5JRS4 329 aa8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 ZNF506Q5JVG8 444 aa8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 DMRTA1Q5VZB9 504 aa8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 ATP6V0E2Q8NHE4 81 aa8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 MED9Q9NWA0 146 aa8.2□□□□□ -1.1
GTF3C1-204ENST00000564664 FGF8P55075 233 aaPredicted RBP8.19□□□□□ -1.1
GTF3C1-204ENST00000564664 LAGE3Q14657 143 aa8.19□□□□□ -1.1
GTF3C1-204ENST00000564664 CLLU1Q5K131 121 aa8.19□□□□□ -1.1
GTF3C1-204ENST00000564664 RPL7L1Q6DKI1 246 aaKnown RBP8.19□□□□□ -1.1
GTF3C1-204ENST00000564664 DPPA3Q6W0C5 159 aa8.19□□□□□ -1.1
GTF3C1-204ENST00000564664 COX8CQ7Z4L0 72 aa8.19□□□□□ -1.1
GTF3C1-204ENST00000564664 ZFP30Q9Y2G7 519 aa8.19□□□□□ -1.1
GTF3C1-204ENST00000564664 LRCOL1A6NCL2 159 aa8.18□□□□□ -1.1
GTF3C1-204ENST00000564664 ASIPP42127 132 aa8.18□□□□□ -1.1
GTF3C1-204ENST00000564664 ZNF345Q14585 488 aa8.18□□□□□ -1.1
GTF3C1-204ENST00000564664 DNLZQ5SXM8 178 aa8.18□□□□□ -1.1
GTF3C1-204ENST00000564664 AKR1C8PQ5T2L2 129 aa8.18□□□□□ -1.1
GTF3C1-204ENST00000564664 TCEAL7Q9BRU2 100 aa8.18□□□□□ -1.1
GTF3C1-204ENST00000564664 TM2D2Q9BX73 214 aa8.18□□□□□ -1.1
GTF3C1-204ENST00000564664 IL36BQ9NZH7 164 aa8.18□□□□□ -1.1
GTF3C1-204ENST00000564664 A0A087WWC5 75 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 FXYD6-FXYD2A0A087WZ82 144 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 IGHV3-73A0A0B4J1V6 119 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 IGKV3D-20A0A0C4DH25 116 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 A0A0D9SG52 128 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 RNF222A6NCQ9 220 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 PEX7O00628 323 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 KRTAP10-1P60331 282 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 SLC7A5P1Q8MH63 180 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 SYT8Q8NBV8 401 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 LINC00479Q96M42 142 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 PARLQ9H300 379 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 ARL2-SNX15V9GYD0 113 aa8.17□□□□□ -1.1
GTF3C1-204ENST00000564664 TRAV34A0A0B4J273 112 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 FAM74A7A6NL05 159 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 B4DEV8 164 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 SMLR1H3BR10 107 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 RHODO00212 210 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 FHITP49789 147 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 ZNF726P1Q15940 193 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 TOR2AQ5JU69 321 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 STOML3Q8TAV4 291 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 FRZBQ92765 325 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 FMC1Q96HJ9 113 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 TMEM70Q9BUB7 260 aa8.16□□□□□ -1.1
GTF3C1-204ENST00000564664 IGLV5-52A0A0A0MRZ9 124 aa8.15□□□□□ -1.1
GTF3C1-204ENST00000564664 TRAV8-3A0A0A6YYJ7 113 aa8.15□□□□□ -1.1
GTF3C1-204ENST00000564664 TRBV6-1A0A0K0K1D8 114 aa8.15□□□□□ -1.1
GTF3C1-204ENST00000564664 SEC11BP0C7V7 166 aa8.15□□□□□ -1.1
GTF3C1-204ENST00000564664 FUSP35637 526 aaKnown RBP eCLIP8.15□□□□□ -1.1
GTF3C1-204ENST00000564664 FAM162BQ5T6X4 162 aa8.15□□□□□ -1.1
GTF3C1-204ENST00000564664 UFSP1Q6NVU6 142 aa8.15□□□□□ -1.1
GTF3C1-204ENST00000564664 Q8N814 137 aa8.15□□□□□ -1.1
GTF3C1-204ENST00000564664 COX11Q9Y6N1 276 aa8.15□□□□□ -1.1
GTF3C1-204ENST00000564664 KRBOX1C9JBD0 128 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 IGHV3-30P01768 117 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 IGHV3-33P01772 117 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 INAFM2P0DMQ5 153 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 LINC00694P0DN24 101 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 IGHV3-30-3P0DP02 117 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 IGHV3-30-5P0DP03 117 aa8.14□□□□□ -1.11
GTF3C1-204ENST00000564664 UBE2G2P60604 165 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 280.4 ms