RNA–Protein interactions for RNA: ENST00000562570.1

AC009041.2-203, humanhuman

TSL 1 (best)

Gene AC009041.2, Length 3,222 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009041.2-203ENST00000562570 JMJD8Q96S16 334 aa13.43□□□□□ -0.26
AC009041.2-203ENST00000562570 MRPL35Q9NZE8 188 aaKnown RBP13.43□□□□□ -0.26
AC009041.2-203ENST00000562570 SCRT2Q9NQ03 307 aa13.42□□□□□ -0.26
AC009041.2-203ENST00000562570 B4DSR2 109 aa13.41□□□□□ -0.26
AC009041.2-203ENST00000562570 CRXO43186 299 aaPredicted RBP13.41□□□□□ -0.26
AC009041.2-203ENST00000562570 HOXA3O43365 443 aaPredicted RBP13.41□□□□□ -0.26
AC009041.2-203ENST00000562570 LINC01545Q5VT33 79 aa13.41□□□□□ -0.26
AC009041.2-203ENST00000562570 VPS25Q9BRG1 176 aa13.41□□□□□ -0.26
AC009041.2-203ENST00000562570 RBX1P62877 108 aa13.4□□□□□ -0.26
AC009041.2-203ENST00000562570 C16orf54Q6UWD8 224 aa13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 FAM159AQ6UWV7 190 aa13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 MYOZ3Q8TDC0 251 aa13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 IGHV7-4-1A0A0J9YVY3 117 aa13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 SRSF2Q01130 221 aaKnown RBP13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 SCGB2A2Q13296 93 aa13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 DAZ1Q9NQZ3 744 aaKnown RBP13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 COX6B1P14854 86 aa13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 ASIPP42127 132 aa13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 RPS20P60866 119 aaKnown RBP13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 SRSF1Q07955 248 aaKnown RBP eCLIP13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 C12orf54Q6X4T0 127 aa13.39□□□□□ -0.27
AC009041.2-203ENST00000562570 SLURP1P55000 103 aa13.38□□□□□ -0.27
AC009041.2-203ENST00000562570 MDFICQ9P1T7 246 aa13.38□□□□□ -0.27
AC009041.2-203ENST00000562570 PEF1Q9UBV8 284 aaKnown RBP13.38□□□□□ -0.27
AC009041.2-203ENST00000562570 CD5LO43866 347 aa13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 RPL39P62891 51 aaKnown RBP13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 RNASE13Q5GAN3 156 aaKnown RBP13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 OPRPNQ99935 248 aaPredicted RBP13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 UNC79Q9P2D8 2635 aa13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 ZNF56Q15929 161 aa13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 TMEM97Q5BJF2 176 aa13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 ZNF493Q6ZR52 646 aa13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 ARL6IP6Q8N6S5 226 aa13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 TAX1BP3O14907 124 aa13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 ZFAND2AQ8N6M9 145 aa13.37□□□□□ -0.27
AC009041.2-203ENST00000562570 CD300EQ496F6 205 aaPredicted RBP13.36□□□□□ -0.27
AC009041.2-203ENST00000562570 ZNF48Q96MX3 618 aaPredicted RBP13.36□□□□□ -0.27
AC009041.2-203ENST00000562570 SCGB3A1Q96QR1 104 aa13.36□□□□□ -0.27
AC009041.2-203ENST00000562570 IGHG2P01859 326 aa13.36□□□□□ -0.27
AC009041.2-203ENST00000562570 C2orf91Q6ZV80 131 aa13.36□□□□□ -0.27
AC009041.2-203ENST00000562570 COX8AP10176 69 aa13.35□□□□□ -0.27
AC009041.2-203ENST00000562570 NHP2Q9NX24 153 aaKnown RBP13.35□□□□□ -0.27
AC009041.2-203ENST00000562570 LINC01559Q495D7 138 aa13.35□□□□□ -0.27
AC009041.2-203ENST00000562570 CSTL1Q9H114 145 aa13.35□□□□□ -0.27
AC009041.2-203ENST00000562570 IGHV4OR15-8A0A075B7B6 117 aa13.35□□□□□ -0.27
AC009041.2-203ENST00000562570 A0A087WW49 117 aa13.35□□□□□ -0.27
AC009041.2-203ENST00000562570 TRAV21A0A0B4J279 112 aa13.35□□□□□ -0.27
AC009041.2-203ENST00000562570 A0A1B0GW15 77 aa13.35□□□□□ -0.27
AC009041.2-203ENST00000562570 A6NDX4 124 aa13.35□□□□□ -0.27
AC009041.2-203ENST00000562570 C9orf139Q6ZV77 190 aa13.35□□□□□ -0.27
AC009041.2-203ENST00000562570 VWFP04275 2813 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 FAM223BA6NKX1 122 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 APRG1Q8IVJ8 170 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 FAM223AQ8IWN6 122 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 Q96MF0 132 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 MS4A6AQ9H2W1 248 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 DEFB125Q8N687 156 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 DPF1Q92782 380 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 NDUFA4O00483 81 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 P0DMU3 169 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 FAM231AP0DMU4 169 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 FAM231CP0DMU5 169 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 LAGE3Q14657 143 aa13.34□□□□□ -0.27
AC009041.2-203ENST00000562570 KLHL30-AS1Q8NEE0 82 aa13.33□□□□□ -0.28
AC009041.2-203ENST00000562570 IGKCP01834 107 aa13.33□□□□□ -0.28
AC009041.2-203ENST00000562570 RIPPLY3P57055 190 aa13.33□□□□□ -0.28
AC009041.2-203ENST00000562570 GATD1Q8NB37 220 aa13.33□□□□□ -0.28
AC009041.2-203ENST00000562570 IGHV3-16A0A0C4DH30 117 aa13.32□□□□□ -0.28
AC009041.2-203ENST00000562570 CDKN1BP46527 198 aa13.32□□□□□ -0.28
AC009041.2-203ENST00000562570 TMEM190Q8WZ59 177 aa13.32□□□□□ -0.28
AC009041.2-203ENST00000562570 A0A0G2JLM5 398 aa13.32□□□□□ -0.28
AC009041.2-203ENST00000562570 PROK1P58294 105 aa13.32□□□□□ -0.28
AC009041.2-203ENST00000562570 SMPXQ9UHP9 88 aa13.32□□□□□ -0.28
AC009041.2-203ENST00000562570 MAPKAPK5-AS1Q8N8E1 139 aa13.32□□□□□ -0.28
AC009041.2-203ENST00000562570 FXYD2P54710 66 aa13.31□□□□□ -0.28
AC009041.2-203ENST00000562570 ODF1Q14990 250 aa13.31□□□□□ -0.28
AC009041.2-203ENST00000562570 Q5PR19 223 aa13.31□□□□□ -0.28
AC009041.2-203ENST00000562570 CYSLTR1Q9Y271 337 aa13.31□□□□□ -0.28
AC009041.2-203ENST00000562570 DUSP14O95147 198 aaKnown RBP13.31□□□□□ -0.28
AC009041.2-203ENST00000562570 C9orf47Q6ZRZ4 202 aa13.31□□□□□ -0.28
AC009041.2-203ENST00000562570 NXT2Q9NPJ8 142 aaKnown RBP13.31□□□□□ -0.28
AC009041.2-203ENST00000562570 TRBV6-1A0A0K0K1D8 114 aa13.3□□□□□ -0.28
AC009041.2-203ENST00000562570 GAGE10A6NGK3 116 aa13.3□□□□□ -0.28
AC009041.2-203ENST00000562570 HOXD3P31249 432 aaPredicted RBP13.3□□□□□ -0.28
AC009041.2-203ENST00000562570 DEFB131AP59861 70 aa13.3□□□□□ -0.28
AC009041.2-203ENST00000562570 SUMO2P61956 95 aaKnown RBP13.3□□□□□ -0.28
AC009041.2-203ENST00000562570 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.3□□□□□ -0.28
AC009041.2-203ENST00000562570 RASL10AQ92737 203 aa13.3□□□□□ -0.28
AC009041.2-203ENST00000562570 Q9UF83 564 aa13.3□□□□□ -0.28
AC009041.2-203ENST00000562570 UBE2E2Q96LR5 201 aa13.3□□□□□ -0.28
AC009041.2-203ENST00000562570 CST9LQ9H4G1 147 aa13.3□□□□□ -0.28
AC009041.2-203ENST00000562570 PRSS29PA6NIE9 313 aa13.29□□□□□ -0.28
AC009041.2-203ENST00000562570 SAP30O75446 220 aa13.29□□□□□ -0.28
AC009041.2-203ENST00000562570 SCGB1D4Q6XE38 83 aa13.29□□□□□ -0.28
AC009041.2-203ENST00000562570 COTL1Q14019 142 aa13.29□□□□□ -0.28
AC009041.2-203ENST00000562570 AMTNQ6UX39 209 aa13.29□□□□□ -0.28
AC009041.2-203ENST00000562570 C2orf66Q6UXQ4 117 aa13.29□□□□□ -0.28
AC009041.2-203ENST00000562570 NRACQ8N912 160 aa13.29□□□□□ -0.28
AC009041.2-203ENST00000562570 RNASE3P12724 160 aaKnown RBP13.28□□□□□ -0.28
AC009041.2-203ENST00000562570 TCTEX1D4Q5JR98 221 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms