RNA–Protein interactions for RNA: ENST00000559886.1

HERC1-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 1 (best)

Gene HERC1, Length 2,462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-205ENST00000559886 RIGQ13278 110 aa8.82□□□□□ -1
HERC1-205ENST00000559886 TIMM8BQ9Y5J9 83 aaPredicted RBP8.82□□□□□ -1
HERC1-205ENST00000559886 IGHV4-4A0A075B6R2 117 aa8.82□□□□□ -1
HERC1-205ENST00000559886 AZU1P20160 251 aa8.82□□□□□ -1
HERC1-205ENST00000559886 NTF3P20783 257 aa8.82□□□□□ -1
HERC1-205ENST00000559886 HBBP68871 147 aa8.82□□□□□ -1
HERC1-205ENST00000559886 C11orf72Q8NBR9 251 aa8.82□□□□□ -1
HERC1-205ENST00000559886 PHLDA3Q9Y5J5 127 aa8.82□□□□□ -1
HERC1-205ENST00000559886 A0A1B0GW15 77 aa8.81□□□□□ -1
HERC1-205ENST00000559886 SSTP61278 116 aa8.81□□□□□ -1
HERC1-205ENST00000559886 CACNG7P62955 275 aa8.81□□□□□ -1
HERC1-205ENST00000559886 SPRY2O43597 315 aa8.81□□□□□ -1
HERC1-205ENST00000559886 PRB2P02812 416 aaPredicted RBP8.81□□□□□ -1
HERC1-205ENST00000559886 RPS10P46783 165 aaKnown RBP8.81□□□□□ -1
HERC1-205ENST00000559886 CAMPP49913 170 aa8.81□□□□□ -1
HERC1-205ENST00000559886 ZNF415Q09FC8 603 aa8.81□□□□□ -1
HERC1-205ENST00000559886 COX19Q49B96 90 aa8.81□□□□□ -1
HERC1-205ENST00000559886 Q6ZWC4 215 aa8.81□□□□□ -1
HERC1-205ENST00000559886 RNASE8Q8TDE3 154 aaKnown RBP8.81□□□□□ -1
HERC1-205ENST00000559886 TMEM263Q8WUH6 116 aaKnown RBP8.81□□□□□ -1
HERC1-205ENST00000559886 GNB1LQ9BYB4 327 aa8.81□□□□□ -1
HERC1-205ENST00000559886 NBEAL2Q6ZNJ1 2754 aa8.8□□□□□ -1
HERC1-205ENST00000559886 TWIST1Q15672 202 aa8.8□□□□□ -1
HERC1-205ENST00000559886 DEFB135Q30KP9 77 aa8.8□□□□□ -1
HERC1-205ENST00000559886 SPANXN1Q5VSR9 72 aa8.8□□□□□ -1
HERC1-205ENST00000559886 GSN-AS1Q9NRJ2 163 aa8.8□□□□□ -1
HERC1-205ENST00000559886 MSRB1Q9NZV6 116 aa8.8□□□□□ -1
HERC1-205ENST00000559886 K7EIL1 84 aa8.8□□□□□ -1
HERC1-205ENST00000559886 NXPH4O95158 308 aa8.8□□□□□ -1
HERC1-205ENST00000559886 TMEM136Q6ZRR5 245 aa8.8□□□□□ -1
HERC1-205ENST00000559886 S100A8P05109 93 aa8.79□□□□□ -1
HERC1-205ENST00000559886 RRN3P1Q2M238 152 aa8.79□□□□□ -1
HERC1-205ENST00000559886 ZNF493Q6ZR52 646 aa8.79□□□□□ -1
HERC1-205ENST00000559886 GATD1Q8NB37 220 aa8.79□□□□□ -1
HERC1-205ENST00000559886 RCHY1Q96PM5 261 aa8.79□□□□□ -1
HERC1-205ENST00000559886 X6R8D5 127 aa8.79□□□□□ -1
HERC1-205ENST00000559886 SMIM9A6NGZ8 99 aa8.79□□□□□ -1
HERC1-205ENST00000559886 SNURFLB1AK76 121 aa8.79□□□□□ -1
HERC1-205ENST00000559886 M0R381 172 aa8.79□□□□□ -1
HERC1-205ENST00000559886 DMRTA1Q5VZB9 504 aa8.79□□□□□ -1
HERC1-205ENST00000559886 ZFP82Q8N141 532 aa8.79□□□□□ -1
HERC1-205ENST00000559886 IL17DQ8TAD2 202 aa8.79□□□□□ -1
HERC1-205ENST00000559886 RNF183Q96D59 192 aa8.79□□□□□ -1
HERC1-205ENST00000559886 C16orf74Q96GX8 76 aa8.79□□□□□ -1
HERC1-205ENST00000559886 SPXQ9BT56 116 aa8.79□□□□□ -1
HERC1-205ENST00000559886 MT-ND6P03923 174 aa8.78□□□□□ -1
HERC1-205ENST00000559886 RAB4BP61018 213 aa8.78□□□□□ -1
HERC1-205ENST00000559886 PLAC8L1A1L4L8 177 aa8.78□□□□□ -1
HERC1-205ENST00000559886 HLA-DQA1P01909 254 aa8.78□□□□□ -1
HERC1-205ENST00000559886 PTH2Q96A98 100 aa8.78□□□□□ -1
HERC1-205ENST00000559886 TRAPPC1Q9Y5R8 145 aa8.78□□□□□ -1
HERC1-205ENST00000559886 M0R2P5 195 aa8.77□□□□□ -1.01
HERC1-205ENST00000559886 SYT8Q8NBV8 401 aa8.77□□□□□ -1.01
HERC1-205ENST00000559886 TRGC2P03986 189 aa8.77□□□□□ -1.01
HERC1-205ENST00000559886 ZNF876PQ49A33 203 aa8.77□□□□□ -1.01
HERC1-205ENST00000559886 OR11H2Q8NH07 326 aa8.77□□□□□ -1.01
HERC1-205ENST00000559886 TMEM191AQ9H0A3 160 aa8.77□□□□□ -1.01
HERC1-205ENST00000559886 MRPL18Q9H0U6 180 aaKnown RBP8.77□□□□□ -1.01
HERC1-205ENST00000559886 PHOX2AO14813 284 aa8.76□□□□□ -1.01
HERC1-205ENST00000559886 TRGC1P0CF51 173 aa8.76□□□□□ -1.01
HERC1-205ENST00000559886 FABP9Q0Z7S8 132 aa8.76□□□□□ -1.01
HERC1-205ENST00000559886 DAZ2Q13117 558 aaKnown RBP8.76□□□□□ -1.01
HERC1-205ENST00000559886 PIK3CD-AS1Q5SR53 167 aa8.76□□□□□ -1.01
HERC1-205ENST00000559886 FRZBQ92765 325 aa8.76□□□□□ -1.01
HERC1-205ENST00000559886 TP53TG1Q9Y2A0 90 aa8.76□□□□□ -1.01
HERC1-205ENST00000559886 EVI2AP22794 236 aa8.76□□□□□ -1.01
HERC1-205ENST00000559886 SLAQ13239 276 aa8.76□□□□□ -1.01
HERC1-205ENST00000559886 SMIM15Q7Z3B0 74 aa8.75□□□□□ -1.01
HERC1-205ENST00000559886 AP1S3Q96PC3 154 aa8.75□□□□□ -1.01
HERC1-205ENST00000559886 OVOL2Q9BRP0 275 aa8.75□□□□□ -1.01
HERC1-205ENST00000559886 NACAE9PAV3 2078 aa8.75□□□□□ -1.01
HERC1-205ENST00000559886 APCSP02743 223 aa8.75□□□□□ -1.01
HERC1-205ENST00000559886 DEFB121Q5J5C9 76 aa8.75□□□□□ -1.01
HERC1-205ENST00000559886 FAM104BQ5XKR9 115 aa8.75□□□□□ -1.01
HERC1-205ENST00000559886 RASL10AQ92737 203 aa8.75□□□□□ -1.01
HERC1-205ENST00000559886 MIFP14174 115 aa8.74□□□□□ -1.01
HERC1-205ENST00000559886 LGALS9BQ3B8N2 356 aa8.74□□□□□ -1.01
HERC1-205ENST00000559886 NDUFAF3Q9BU61 184 aa8.74□□□□□ -1.01
HERC1-205ENST00000559886 JPT2Q9H910 190 aa8.74□□□□□ -1.01
HERC1-205ENST00000559886 NOP10Q9NPE3 64 aaKnown RBP8.74□□□□□ -1.01
HERC1-205ENST00000559886 SBSPONQ8IVN8 264 aa8.74□□□□□ -1.01
HERC1-205ENST00000559886 AMN1Q8IY45 258 aa8.74□□□□□ -1.01
HERC1-205ENST00000559886 C14orf178Q8N769 122 aaPredicted RBP8.74□□□□□ -1.01
HERC1-205ENST00000559886 Q8NAQ8 132 aa8.74□□□□□ -1.01
HERC1-205ENST00000559886 MRPL16Q9NX20 251 aaKnown RBP8.74□□□□□ -1.01
HERC1-205ENST00000559886 KIF25-AS1Q9Y6Z4 181 aa8.74□□□□□ -1.01
HERC1-205ENST00000559886 C1orf196B1AJZ1 125 aa8.73□□□□□ -1.01
HERC1-205ENST00000559886 RNF185Q96GF1 192 aa8.73□□□□□ -1.01
HERC1-205ENST00000559886 DPH3P1Q9H4G8 78 aa8.73□□□□□ -1.01
HERC1-205ENST00000559886 IGHV4-28A0A0C4DH34 117 aa8.73□□□□□ -1.01
HERC1-205ENST00000559886 RAB4AP20338 218 aa8.73□□□□□ -1.01
HERC1-205ENST00000559886 TRGV1A0A0A0MS02 117 aa8.72□□□□□ -1.01
HERC1-205ENST00000559886 A8MWV9 139 aa8.72□□□□□ -1.01
HERC1-205ENST00000559886 CRYGDP07320 174 aa8.72□□□□□ -1.01
HERC1-205ENST00000559886 EMP1P54849 157 aa8.72□□□□□ -1.01
HERC1-205ENST00000559886 LINC00315P59091 139 aa8.72□□□□□ -1.01
HERC1-205ENST00000559886 KIAA1644Q3SXP7 199 aa8.72□□□□□ -1.01
HERC1-205ENST00000559886 Q6ZTI0 123 aa8.72□□□□□ -1.01
HERC1-205ENST00000559886 RETNQ9HD89 108 aa8.72□□□□□ -1.01
HERC1-205ENST00000559886 SMIM17P0DL12 118 aa8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 176.9 ms