RNA–Protein interactions for RNA: ENST00000557496.1

FOXN3-216, Transcript of forkhead box N3, humanhuman

TSL 5

Gene FOXN3, Length 228 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-216ENST00000557496 LYRM2Q9NU23 88 aaPredicted RBP-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 SSR3Q9UNL2 185 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 UFC1Q9Y3C8 167 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 MPC1Q9Y5U8 109 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 WNK3Q9BYP7 1800 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 ZNF236Q9UL36 1845 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 SETD2Q9BYW2 2564 aaPredicted RBP-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 EPG5Q9HCE0 2579 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 NCAPD3P42695 1498 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 GOLGA3Q08378 1498 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 CAMSAP2Q08AD1 1489 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 PTPRGP23470 1445 aa-0.3□□□□□ -2.46
FOXN3-216ENST00000557496 PI4KAP42356 2102 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 NHSL1Q5SYE7 1610 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 VPS13DQ5THJ4 4388 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 DNAH3Q8TD57 4116 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 TSC2P49815 1807 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 DNAH9Q9NYC9 4486 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 CDK13Q14004 1512 aaKnown RBP-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 TRBV27A0A0K0K1C4 114 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 LOC107984640A0A0U1RRK4 108 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 ARL5CA6NH57 179 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 SMIM23A6NLE4 172 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 ZNF815PA8K554 130 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 BBIP1A8MTZ0 92 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 C5orf58C9J3I9 102 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 PPP5D1E7EU14 171 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 H3BMG7 143 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 ATP5HO75947 161 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 CFDP00746 253 aaPredicted RBP-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 SLC25A5P05141 298 aaKnown RBP-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 TPT1P13693 172 aaKnown RBP-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 ADCYAP1P18509 176 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 CRYGSP22914 178 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 PPP1R2P41236 205 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 SPAG11BQ08648 103 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 FADDQ13158 208 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 KRTAP19-8Q3LI54 63 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 FAM74A4Q5TZK3 123 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 OR2T2Q6IF00 324 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 IDO2Q6ZQW0 420 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 Q6ZRX8 168 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 LINC00305Q7Z4B0 112 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 IFT20Q8IY31 132 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 OR4B1Q8NGF8 309 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 OTOSQ8NHW6 89 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 NEK7Q8TDX7 302 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 DMAC1Q96GE9 116 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 DSCR8Q96T75 97 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 PBDC1Q9BVG4 233 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 CYP4F30PQ9H0H9 118 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 ATG5Q9H1Y0 275 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 MED11Q9P086 117 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 TRAPPC2LQ9UL33 140 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 ARL2BPQ9Y2Y0 163 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 NUBP2Q9Y5Y2 271 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 AKAP9Q99996 3911 aa-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.31□□□□□ -2.46
FOXN3-216ENST00000557496 NBASA2RRP1 2371 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 ZMYM4Q5VZL5 1548 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 IFT172Q9UG01 1749 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 ARAP1Q96P48 1450 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 TRGV1A0A0A0MS02 117 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 TRAV13-1A0A0B4J241 112 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 TRAV17A0A0B4J275 112 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 IGHV1-24A0A0C4DH33 117 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 TRBV10-1A0A0K0K1A3 114 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 A0A1W2PRE2 83 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 CLPSL1A2RUU4 121 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 TMEM210A6NLX4 147 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 TMEM238C9JI98 176 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 F2Z2F3 143 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 H3BQV1 296 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 AIPO00170 330 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 OR2H2O95918 312 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 IFNA1P01562 189 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 HBDP02042 147 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 APOA2P02652 100 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 TCRAP04437 139 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 SAA1P0DJI8 122 aaPredicted RBP-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 SLC25A6P12236 298 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 CCL3L1P16619 93 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 SDC2P34741 201 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 SPRR2BP35325 72 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 DNAJB13P59910 316 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 REEP5Q00765 189 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 WFDC2Q14508 124 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 SPA17Q15506 151 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 DEFB109BQ30KR1 87 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 KRTAP6-2Q3LI66 62 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 SCGB2B2Q4G0G5 96 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 TMEM78Q5T7P6 136 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 FAM24BQ8N5W8 94 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 OR8J3Q8NGG0 315 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 OR13C6PQ8NH95 151 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 SMIM11BQ8TCY0 68 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 BRK1Q8WUW1 75 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 DYDC1Q8WWB3 177 aa-0.32□□□□□ -2.46
FOXN3-216ENST00000557496 IFI27L1Q96BM0 104 aa-0.32□□□□□ -2.46
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms