RNA–Protein interactions for RNA: ENST00000556548.5

SDR39U1-220, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 2,336 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-220ENST00000556548 FAM19A4Q96LR4 140 aa13.71□□□□□ -0.21
SDR39U1-220ENST00000556548 ZNF418Q8TF45 676 aaPredicted RBP13.7□□□□□ -0.22
SDR39U1-220ENST00000556548 SORL1Q92673 2214 aa13.7□□□□□ -0.22
SDR39U1-220ENST00000556548 TRAV21A0A0B4J279 112 aa13.7□□□□□ -0.22
SDR39U1-220ENST00000556548 D6R8Y8 96 aa13.7□□□□□ -0.22
SDR39U1-220ENST00000556548 SMKR1H3BMG3 65 aa13.7□□□□□ -0.22
SDR39U1-220ENST00000556548 FAM104BQ5XKR9 115 aa13.7□□□□□ -0.22
SDR39U1-220ENST00000556548 H3BVH4 76 aa13.69□□□□□ -0.22
SDR39U1-220ENST00000556548 RAX2Q96IS3 184 aa13.69□□□□□ -0.22
SDR39U1-220ENST00000556548 CITED2Q99967 270 aaPredicted RBP13.69□□□□□ -0.22
SDR39U1-220ENST00000556548 NIPBLQ6KC79 2804 aaeCLIP13.69□□□□□ -0.22
SDR39U1-220ENST00000556548 MRPL51Q4U2R6 128 aaKnown RBP13.69□□□□□ -0.22
SDR39U1-220ENST00000556548 SAMD13Q5VXD3 122 aa13.69□□□□□ -0.22
SDR39U1-220ENST00000556548 SCGB2A2Q13296 93 aa13.68□□□□□ -0.22
SDR39U1-220ENST00000556548 ANXA2RQ3ZCQ2 193 aa13.68□□□□□ -0.22
SDR39U1-220ENST00000556548 PEMTQ9UBM1 199 aa13.68□□□□□ -0.22
SDR39U1-220ENST00000556548 M0R2Z0 102 aa13.68□□□□□ -0.22
SDR39U1-220ENST00000556548 NCR2O95944 276 aa13.68□□□□□ -0.22
SDR39U1-220ENST00000556548 LOC389332A0A1B0GUA5 103 aa13.67□□□□□ -0.22
SDR39U1-220ENST00000556548 GNRH2O43555 120 aa13.67□□□□□ -0.22
SDR39U1-220ENST00000556548 C3orf79P0CE67 100 aa13.67□□□□□ -0.22
SDR39U1-220ENST00000556548 HILS1P60008 231 aa13.67□□□□□ -0.22
SDR39U1-220ENST00000556548 CNFNQ9BYD5 112 aa13.67□□□□□ -0.22
SDR39U1-220ENST00000556548 TRAV12-2A0A075B6T6 113 aa13.67□□□□□ -0.22
SDR39U1-220ENST00000556548 A0A0J9YX75 114 aa13.67□□□□□ -0.22
SDR39U1-220ENST00000556548 TRAV12-3A0A0B4J271 114 aa13.66□□□□□ -0.22
SDR39U1-220ENST00000556548 EBLN2Q6P2I7 272 aa13.66□□□□□ -0.22
SDR39U1-220ENST00000556548 TMEM61Q8N0U2 210 aa13.66□□□□□ -0.22
SDR39U1-220ENST00000556548 EVI2AP22794 236 aa13.65□□□□□ -0.22
SDR39U1-220ENST00000556548 S100A4P26447 101 aaKnown RBP13.65□□□□□ -0.22
SDR39U1-220ENST00000556548 SPANXN1Q5VSR9 72 aa13.65□□□□□ -0.22
SDR39U1-220ENST00000556548 DYNLRB2Q8TF09 96 aa13.65□□□□□ -0.22
SDR39U1-220ENST00000556548 TMEM191AQ9H0A3 160 aa13.65□□□□□ -0.22
SDR39U1-220ENST00000556548 AGRNO00468 2067 aa13.65□□□□□ -0.22
SDR39U1-220ENST00000556548 GAS8-AS1O95177 125 aa13.65□□□□□ -0.22
SDR39U1-220ENST00000556548 CKS2P33552 79 aa13.65□□□□□ -0.22
SDR39U1-220ENST00000556548 PRELID3AQ96N28 172 aa13.65□□□□□ -0.22
SDR39U1-220ENST00000556548 WNK1Q9H4A3 2382 aa13.65□□□□□ -0.22
SDR39U1-220ENST00000556548 SETXQ7Z333 2677 aaKnown RBP13.64□□□□□ -0.23
SDR39U1-220ENST00000556548 KLLNB2CW77 178 aa13.64□□□□□ -0.23
SDR39U1-220ENST00000556548 CCL24O00175 119 aa13.64□□□□□ -0.23
SDR39U1-220ENST00000556548 APRG1Q8IVJ8 170 aa13.64□□□□□ -0.23
SDR39U1-220ENST00000556548 ORMDL3Q8N138 153 aa13.64□□□□□ -0.23
SDR39U1-220ENST00000556548 RNF185Q96GF1 192 aa13.64□□□□□ -0.23
SDR39U1-220ENST00000556548 TMEM160Q9NX00 188 aa13.64□□□□□ -0.23
SDR39U1-220ENST00000556548 KNCNA6PVL3 124 aa13.64□□□□□ -0.23
SDR39U1-220ENST00000556548 C16orf95Q9H693 158 aa13.64□□□□□ -0.23
SDR39U1-220ENST00000556548 INAFM1C9JVW0 142 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 DEFB131AP59861 70 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 SPINK13Q1W4C9 94 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 TRAV9-2A0A087WT02 112 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 IGHV1-24A0A0C4DH33 117 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 GAGE12BA1L429 117 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 M0R381 172 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 TAX1BP3O14907 124 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 OR5AL1P0C617 328 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 IFI27P40305 119 aaPredicted RBP13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 FXYD7P58549 80 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 ATOH7Q8N100 152 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 PRSS3P2Q8NHM4 247 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 U3KQK5 164 aa13.63□□□□□ -0.23
SDR39U1-220ENST00000556548 TRBV7-9A0A0J9YWB2 115 aa13.62□□□□□ -0.23
SDR39U1-220ENST00000556548 ASIPP42127 132 aa13.62□□□□□ -0.23
SDR39U1-220ENST00000556548 CD300EQ496F6 205 aaPredicted RBP13.62□□□□□ -0.23
SDR39U1-220ENST00000556548 CHCHD1Q96BP2 118 aaKnown RBP13.62□□□□□ -0.23
SDR39U1-220ENST00000556548 SNAI2O43623 268 aa13.62□□□□□ -0.23
SDR39U1-220ENST00000556548 NPYP01303 97 aa13.62□□□□□ -0.23
SDR39U1-220ENST00000556548 GATA1P15976 413 aaPredicted RBP13.62□□□□□ -0.23
SDR39U1-220ENST00000556548 DEFB114Q30KQ6 69 aa13.62□□□□□ -0.23
SDR39U1-220ENST00000556548 ERASQ7Z444 233 aa13.62□□□□□ -0.23
SDR39U1-220ENST00000556548 TSSC4Q9Y5U2 329 aaPredicted RBP13.62□□□□□ -0.23
SDR39U1-220ENST00000556548 RIPPLY3P57055 190 aa13.61□□□□□ -0.23
SDR39U1-220ENST00000556548 AMMECR1LQ6DCA0 310 aa13.61□□□□□ -0.23
SDR39U1-220ENST00000556548 FAM159AQ6UWV7 190 aa13.61□□□□□ -0.23
SDR39U1-220ENST00000556548 LINC00173Q6ZV60 143 aa13.61□□□□□ -0.23
SDR39U1-220ENST00000556548 TRAV26-2A0A0B4J265 109 aa13.6□□□□□ -0.23
SDR39U1-220ENST00000556548 C7orf71A4D174 169 aa13.6□□□□□ -0.23
SDR39U1-220ENST00000556548 LEPP41159 167 aa13.6□□□□□ -0.23
SDR39U1-220ENST00000556548 FOXI2Q6ZQN5 318 aa13.6□□□□□ -0.23
SDR39U1-220ENST00000556548 SIGLEC8Q9NYZ4 499 aa13.6□□□□□ -0.23
SDR39U1-220ENST00000556548 PHLDA3Q9Y5J5 127 aa13.6□□□□□ -0.23
SDR39U1-220ENST00000556548 HIVEP1P15822 2718 aa13.6□□□□□ -0.23
SDR39U1-220ENST00000556548 FHL3Q13643 280 aa13.59□□□□□ -0.23
SDR39U1-220ENST00000556548 NSUN5P1Q3KNT7 163 aa13.59□□□□□ -0.23
SDR39U1-220ENST00000556548 FA2HQ7L5A8 372 aa13.59□□□□□ -0.23
SDR39U1-220ENST00000556548 RNASE3P12724 160 aaKnown RBP13.59□□□□□ -0.23
SDR39U1-220ENST00000556548 DEFB125Q8N687 156 aa13.59□□□□□ -0.23
SDR39U1-220ENST00000556548 IGLL1P15814 213 aa13.58□□□□□ -0.23
SDR39U1-220ENST00000556548 AP5S1Q9NUS5 200 aa13.58□□□□□ -0.23
SDR39U1-220ENST00000556548 DUSP14O95147 198 aaKnown RBP13.58□□□□□ -0.24
SDR39U1-220ENST00000556548 CD7P09564 240 aa13.58□□□□□ -0.24
SDR39U1-220ENST00000556548 CACNG7P62955 275 aa13.58□□□□□ -0.24
SDR39U1-220ENST00000556548 MPV17L2Q567V2 206 aa13.58□□□□□ -0.24
SDR39U1-220ENST00000556548 IGHV4-4A0A075B6R2 117 aa13.57□□□□□ -0.24
SDR39U1-220ENST00000556548 AMTNQ6UX39 209 aa13.57□□□□□ -0.24
SDR39U1-220ENST00000556548 LEPROTL1O95214 131 aa13.56□□□□□ -0.24
SDR39U1-220ENST00000556548 ODF3Q96PU9 254 aa13.56□□□□□ -0.24
SDR39U1-220ENST00000556548 NSD1Q96L73 2696 aaPredicted RBP13.56□□□□□ -0.24
SDR39U1-220ENST00000556548 PROK1P58294 105 aa13.56□□□□□ -0.24
SDR39U1-220ENST00000556548 C14orf178Q8N769 122 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms