RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 RNASE3P12724 160 aaKnown RBP15.19■□□□□ 0.02
ACTN1-220ENST00000556433 RPL7L1Q6DKI1 246 aaKnown RBP15.19■□□□□ 0.02
ACTN1-220ENST00000556433 LINC00479Q96M42 142 aa15.19■□□□□ 0.02
ACTN1-220ENST00000556433 BORCS7-ASMTA0A0B4J1R7 106 aa15.18■□□□□ 0.02
ACTN1-220ENST00000556433 TRAV34A0A0B4J273 112 aa15.18■□□□□ 0.02
ACTN1-220ENST00000556433 IBA57-AS1B1ANH7 110 aa15.18■□□□□ 0.02
ACTN1-220ENST00000556433 GIPP09681 153 aaPredicted RBP15.18■□□□□ 0.02
ACTN1-220ENST00000556433 GCSHP23434 173 aa15.18■□□□□ 0.02
ACTN1-220ENST00000556433 BOLA1Q9Y3E2 137 aa15.18■□□□□ 0.02
ACTN1-220ENST00000556433 IFNA7P01567 189 aa15.17■□□□□ 0.02
ACTN1-220ENST00000556433 MGST1P10620 155 aaKnown RBP15.17■□□□□ 0.02
ACTN1-220ENST00000556433 LELP1Q5T871 98 aa15.17■□□□□ 0.02
ACTN1-220ENST00000556433 IGKV3D-20A0A0C4DH25 116 aa15.16■□□□□ 0.02
ACTN1-220ENST00000556433 IGHV3-30P01768 117 aa15.16■□□□□ 0.02
ACTN1-220ENST00000556433 IGHV3-33P01772 117 aa15.16■□□□□ 0.02
ACTN1-220ENST00000556433 IGHV3-30-3P0DP02 117 aa15.16■□□□□ 0.02
ACTN1-220ENST00000556433 IGHV3-30-5P0DP03 117 aa15.16■□□□□ 0.02
ACTN1-220ENST00000556433 S100A4P26447 101 aaKnown RBP15.16■□□□□ 0.02
ACTN1-220ENST00000556433 ATP6V0E2Q8NHE4 81 aa15.16■□□□□ 0.02
ACTN1-220ENST00000556433 GTSF1LQ9H1H1 148 aa15.16■□□□□ 0.02
ACTN1-220ENST00000556433 Q9HAA7 133 aa15.16■□□□□ 0.02
ACTN1-220ENST00000556433 FXYD6-FXYD2A0A087WZ82 144 aa15.15■□□□□ 0.02
ACTN1-220ENST00000556433 LRCOL1A6NCL2 159 aa15.15■□□□□ 0.02
ACTN1-220ENST00000556433 RNF222A6NCQ9 220 aa15.15■□□□□ 0.02
ACTN1-220ENST00000556433 FABP5P3A8MUU1 101 aa15.15■□□□□ 0.02
ACTN1-220ENST00000556433 UBE2G2P60604 165 aa15.15■□□□□ 0.02
ACTN1-220ENST00000556433 ZNF726P1Q15940 193 aa15.15■□□□□ 0.02
ACTN1-220ENST00000556433 ARL2-SNX15V9GYD0 113 aa15.15■□□□□ 0.02
ACTN1-220ENST00000556433 CTXND1A0A1B0GTU2 59 aa15.14■□□□□ 0.01
ACTN1-220ENST00000556433 LGALSLQ3ZCW2 172 aaPredicted RBP15.14■□□□□ 0.01
ACTN1-220ENST00000556433 Q6ZSN1 163 aa15.14■□□□□ 0.01
ACTN1-220ENST00000556433 PARLQ9H300 379 aa15.13■□□□□ 0.01
ACTN1-220ENST00000556433 IGLV5-52A0A0A0MRZ9 124 aa15.12■□□□□ 0.01
ACTN1-220ENST00000556433 A8MWV9 139 aa15.12■□□□□ 0.01
ACTN1-220ENST00000556433 PEX7O00628 323 aa15.12■□□□□ 0.01
ACTN1-220ENST00000556433 ASIPP42127 132 aa15.12■□□□□ 0.01
ACTN1-220ENST00000556433 FGF8P55075 233 aaPredicted RBP15.12■□□□□ 0.01
ACTN1-220ENST00000556433 ZFP2Q6ZN57 461 aa15.12■□□□□ 0.01
ACTN1-220ENST00000556433 GAGE12JA6NER3 117 aa15.11■□□□□ 0.01
ACTN1-220ENST00000556433 INAFM2P0DMQ5 153 aa15.11■□□□□ 0.01
ACTN1-220ENST00000556433 GAGE1Q13065 139 aa15.11■□□□□ 0.01
ACTN1-220ENST00000556433 GAGE4Q13068 117 aa15.11■□□□□ 0.01
ACTN1-220ENST00000556433 GAGE5Q13069 117 aa15.11■□□□□ 0.01
ACTN1-220ENST00000556433 GAGE13Q4V321 117 aa15.11■□□□□ 0.01
ACTN1-220ENST00000556433 PIK3CD-AS1Q5SR53 167 aa15.11■□□□□ 0.01
ACTN1-220ENST00000556433 AKR1C8PQ5T2L2 129 aa15.11■□□□□ 0.01
ACTN1-220ENST00000556433 OR2T35Q8NGX2 323 aa15.11■□□□□ 0.01
ACTN1-220ENST00000556433 FRZBQ92765 325 aa15.11■□□□□ 0.01
ACTN1-220ENST00000556433 FAT1Q14517 4588 aa15.1■□□□□ 0.01
ACTN1-220ENST00000556433 FAM74A7A6NL05 159 aa15.1■□□□□ 0.01
ACTN1-220ENST00000556433 B4DEV8 164 aa15.1■□□□□ 0.01
ACTN1-220ENST00000556433 NTN5Q8WTR8 489 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-220ENST00000556433 HIST1H2BAQ96A08 127 aa15.1■□□□□ 0.01
ACTN1-220ENST00000556433 NKX6-2Q9C056 277 aaPredicted RBP15.1■□□□□ 0.01
ACTN1-220ENST00000556433 JPT2Q9H910 190 aa15.1■□□□□ 0.01
ACTN1-220ENST00000556433 Q5VSD8 79 aa15.09■□□□□ 0.01
ACTN1-220ENST00000556433 Q86TA4 180 aa15.09■□□□□ 0.01
ACTN1-220ENST00000556433 IL36BQ9NZH7 164 aa15.09■□□□□ 0.01
ACTN1-220ENST00000556433 SMR3BP02814 79 aaPredicted RBP15.08■□□□□ 0
ACTN1-220ENST00000556433 CRIP1P50238 77 aa15.08■□□□□ 0
ACTN1-220ENST00000556433 DMRTA1Q5VZB9 504 aa15.08■□□□□ 0
ACTN1-220ENST00000556433 Q8N814 137 aa15.08■□□□□ 0
ACTN1-220ENST00000556433 SAMD10Q9BYL1 202 aa15.08■□□□□ 0
ACTN1-220ENST00000556433 H3BVH4 76 aa15.07■□□□□ 0
ACTN1-220ENST00000556433 ZC2HC1AQ96GY0 325 aa15.07■□□□□ 0
ACTN1-220ENST00000556433 TM2D2Q9BX73 214 aa15.07■□□□□ 0
ACTN1-220ENST00000556433 Q9UF83 564 aa15.07■□□□□ 0
ACTN1-220ENST00000556433 KRBOX1C9JBD0 128 aa15.06■□□□□ 0
ACTN1-220ENST00000556433 M0R036 132 aa15.06■□□□□ 0
ACTN1-220ENST00000556433 ARMS2P0C7Q2 107 aa15.06■□□□□ 0
ACTN1-220ENST00000556433 HAMPP81172 84 aa15.06■□□□□ 0
ACTN1-220ENST00000556433 LAGE3Q14657 143 aa15.06■□□□□ 0
ACTN1-220ENST00000556433 UFSP1Q6NVU6 142 aa15.06■□□□□ 0
ACTN1-220ENST00000556433 Q8N3U1 123 aa15.06■□□□□ 0
ACTN1-220ENST00000556433 C14orf178Q8N769 122 aaPredicted RBP15.06■□□□□ 0
ACTN1-220ENST00000556433 SYT8Q8NBV8 401 aa15.06■□□□□ 0
ACTN1-220ENST00000556433 ZFP30Q9Y2G7 519 aa15.06■□□□□ 0
ACTN1-220ENST00000556433 GRIFINA4D1Z8 144 aa15.05■□□□□ -0
ACTN1-220ENST00000556433 MAP1LC3B2A6NCE7 125 aa15.05■□□□□ -0
ACTN1-220ENST00000556433 SH2D1AO60880 128 aa15.05■□□□□ -0
ACTN1-220ENST00000556433 LINC00694P0DN24 101 aa15.05■□□□□ -0
ACTN1-220ENST00000556433 DNLZQ5SXM8 178 aa15.05■□□□□ -0
ACTN1-220ENST00000556433 MAP1LC3BQ9GZQ8 125 aa15.05■□□□□ -0
ACTN1-220ENST00000556433 G3V3Q6 166 aa15.04■□□□□ -0
ACTN1-220ENST00000556433 OR11H4Q8NGC9 324 aa15.04■□□□□ -0
ACTN1-220ENST00000556433 TMEM70Q9BUB7 260 aa15.04■□□□□ -0
ACTN1-220ENST00000556433 CYTL1Q9NRR1 136 aa15.04■□□□□ -0
ACTN1-220ENST00000556433 ARPC5O15511 151 aa15.03■□□□□ -0
ACTN1-220ENST00000556433 UBE2G1P62253 170 aa15.03■□□□□ -0
ACTN1-220ENST00000556433 FAM162BQ5T6X4 162 aa15.03■□□□□ -0
ACTN1-220ENST00000556433 COX8CQ7Z4L0 72 aa15.03■□□□□ -0
ACTN1-220ENST00000556433 FMC1Q96HJ9 113 aa15.03■□□□□ -0
ACTN1-220ENST00000556433 A0A087WWC5 75 aa15.02■□□□□ -0
ACTN1-220ENST00000556433 TRAV8-3A0A0A6YYJ7 113 aa15.02■□□□□ -0
ACTN1-220ENST00000556433 RHODO00212 210 aa15.02■□□□□ -0
ACTN1-220ENST00000556433 CST9LP1Q5W188 147 aa15.02■□□□□ -0
ACTN1-220ENST00000556433 DAZ4Q86SG3 579 aaKnown RBP15.02■□□□□ -0
ACTN1-220ENST00000556433 STOML3Q8TAV4 291 aa15.02■□□□□ -0
ACTN1-220ENST00000556433 DAZ3Q9NR90 486 aaKnown RBP15.02■□□□□ -0
ACTN1-220ENST00000556433 PHLDA3Q9Y5J5 127 aa15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms