RNA–Protein interactions for RNA: ENST00000555542.5

PRKCH-216, Transcript of protein kinase C eta, humanhuman

TSL 4

Gene PRKCH, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-216ENST00000555542 ERVFC1-1P60608 527 aa16.63■□□□□ 0.25
PRKCH-216ENST00000555542 CST9LP1Q5W188 147 aa16.63■□□□□ 0.25
PRKCH-216ENST00000555542 IGKV3D-20A0A0C4DH25 116 aa16.62■□□□□ 0.25
PRKCH-216ENST00000555542 K7EP13 123 aa16.62■□□□□ 0.25
PRKCH-216ENST00000555542 CDK2AP2O75956 126 aa16.62■□□□□ 0.25
PRKCH-216ENST00000555542 PTH2Q96A98 100 aa16.62■□□□□ 0.25
PRKCH-216ENST00000555542 MSRB1Q9NZV6 116 aa16.62■□□□□ 0.25
PRKCH-216ENST00000555542 TRBV6-4A0A1B0GX49 114 aa16.61■□□□□ 0.25
PRKCH-216ENST00000555542 B4DEV8 164 aa16.61■□□□□ 0.25
PRKCH-216ENST00000555542 CRYGDP07320 174 aa16.61■□□□□ 0.25
PRKCH-216ENST00000555542 DNAH10OSP0CZ25 163 aa16.61■□□□□ 0.25
PRKCH-216ENST00000555542 ZNF345Q14585 488 aa16.61■□□□□ 0.25
PRKCH-216ENST00000555542 LGALSLQ3ZCW2 172 aaPredicted RBP16.61■□□□□ 0.25
PRKCH-216ENST00000555542 KCNRGQ8N5I3 272 aa16.61■□□□□ 0.25
PRKCH-216ENST00000555542 FMC1Q96HJ9 113 aa16.61■□□□□ 0.25
PRKCH-216ENST00000555542 MGST1P10620 155 aaKnown RBP16.6■□□□□ 0.25
PRKCH-216ENST00000555542 FHITP49789 147 aa16.6■□□□□ 0.25
PRKCH-216ENST00000555542 C10orf126Q8N4M7 172 aa16.6■□□□□ 0.25
PRKCH-216ENST00000555542 ZFP30Q9Y2G7 519 aa16.6■□□□□ 0.25
PRKCH-216ENST00000555542 PCLOQ9Y6V0 5065 aa16.59■□□□□ 0.25
PRKCH-216ENST00000555542 TRAV8-6A0A0B4J262 113 aa16.59■□□□□ 0.25
PRKCH-216ENST00000555542 OR10J3Q5JRS4 329 aa16.59■□□□□ 0.25
PRKCH-216ENST00000555542 ZC2HC1AQ96GY0 325 aa16.59■□□□□ 0.25
PRKCH-216ENST00000555542 ZNF471Q9BX82 626 aaPredicted RBP16.59■□□□□ 0.25
PRKCH-216ENST00000555542 IGHV3-38A0A0C4DH36 116 aa16.58■□□□□ 0.24
PRKCH-216ENST00000555542 KANTRA0A1W2PQU2 76 aa16.58■□□□□ 0.24
PRKCH-216ENST00000555542 A8MWV9 139 aa16.58■□□□□ 0.24
PRKCH-216ENST00000555542 H3BVH4 76 aa16.58■□□□□ 0.24
PRKCH-216ENST00000555542 M0R036 132 aa16.58■□□□□ 0.24
PRKCH-216ENST00000555542 TIRAPP58753 221 aa16.58■□□□□ 0.24
PRKCH-216ENST00000555542 FAM213BQ8TBF2 198 aa16.58■□□□□ 0.24
PRKCH-216ENST00000555542 TCEAL7Q9BRU2 100 aa16.58■□□□□ 0.24
PRKCH-216ENST00000555542 A0A0D9SG52 128 aa16.57■□□□□ 0.24
PRKCH-216ENST00000555542 A0A1B0GV50 99 aa16.57■□□□□ 0.24
PRKCH-216ENST00000555542 SH2D1AO60880 128 aa16.57■□□□□ 0.24
PRKCH-216ENST00000555542 AKR1C3P42330 323 aa16.57■□□□□ 0.24
PRKCH-216ENST00000555542 FAM162BQ5T6X4 162 aa16.57■□□□□ 0.24
PRKCH-216ENST00000555542 SFT2D1Q8WV19 159 aa16.57■□□□□ 0.24
PRKCH-216ENST00000555542 PARLQ9H300 379 aa16.57■□□□□ 0.24
PRKCH-216ENST00000555542 RYR1P21817 5038 aa16.56■□□□□ 0.24
PRKCH-216ENST00000555542 SEC11BP0C7V7 166 aa16.56■□□□□ 0.24
PRKCH-216ENST00000555542 MAPKAPK5-AS1Q8N8E1 139 aa16.56■□□□□ 0.24
PRKCH-216ENST00000555542 SYT8Q8NBV8 401 aa16.56■□□□□ 0.24
PRKCH-216ENST00000555542 IL36BQ9NZH7 164 aa16.56■□□□□ 0.24
PRKCH-216ENST00000555542 HMSDA8MTL9 139 aa16.55■□□□□ 0.24
PRKCH-216ENST00000555542 UMAD1C9J7I0 102 aa16.55■□□□□ 0.24
PRKCH-216ENST00000555542 BCL2L11O43521 198 aa16.55■□□□□ 0.24
PRKCH-216ENST00000555542 PAGE4O60829 102 aa16.55■□□□□ 0.24
PRKCH-216ENST00000555542 ATP6V0E2Q8NHE4 81 aa16.55■□□□□ 0.24
PRKCH-216ENST00000555542 BOLA1Q9Y3E2 137 aa16.55■□□□□ 0.24
PRKCH-216ENST00000555542 GRIFINA4D1Z8 144 aa16.54■□□□□ 0.24
PRKCH-216ENST00000555542 KRBOX1C9JBD0 128 aa16.54■□□□□ 0.24
PRKCH-216ENST00000555542 CRIP1P50238 77 aa16.54■□□□□ 0.24
PRKCH-216ENST00000555542 PIK3CD-AS1Q5SR53 167 aa16.54■□□□□ 0.24
PRKCH-216ENST00000555542 ZFP2Q6ZN57 461 aa16.54■□□□□ 0.24
PRKCH-216ENST00000555542 OR11H4Q8NGC9 324 aa16.54■□□□□ 0.24
PRKCH-216ENST00000555542 PGPEP1Q9NXJ5 209 aa16.54■□□□□ 0.24
PRKCH-216ENST00000555542 TMSB15BA0A087X1C1 80 aa16.53■□□□□ 0.24
PRKCH-216ENST00000555542 PFDN1O60925 122 aa16.53■□□□□ 0.24
PRKCH-216ENST00000555542 ARMS2P0C7Q2 107 aa16.53■□□□□ 0.24
PRKCH-216ENST00000555542 EIF5AP63241 154 aaKnown RBP16.53■□□□□ 0.24
PRKCH-216ENST00000555542 GTSF1LQ9H1H1 148 aa16.53■□□□□ 0.24
PRKCH-216ENST00000555542 GAGE12JA6NER3 117 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 PSCAO43653 123 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 LTAP01374 205 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 FUSP35637 526 aaKnown RBP eCLIP16.52■□□□□ 0.24
PRKCH-216ENST00000555542 GAGE1Q13065 139 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 GAGE4Q13068 117 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 GAGE5Q13069 117 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 GAGE13Q4V321 117 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 LINC01556Q5JQF7 62 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 LELP1Q5T871 98 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 COX8CQ7Z4L0 72 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 JPT2Q9H910 190 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 PHLDA3Q9Y5J5 127 aa16.52■□□□□ 0.24
PRKCH-216ENST00000555542 A0A087WTM6 91 aa16.51■□□□□ 0.23
PRKCH-216ENST00000555542 TRBV6-1A0A0K0K1D8 114 aa16.51■□□□□ 0.23
PRKCH-216ENST00000555542 TPT1P13693 172 aaKnown RBP16.51■□□□□ 0.23
PRKCH-216ENST00000555542 FAM74A4Q5TZK3 123 aa16.51■□□□□ 0.23
PRKCH-216ENST00000555542 DMRTA1Q5VZB9 504 aa16.51■□□□□ 0.23
PRKCH-216ENST00000555542 Q6ZSN1 163 aa16.51■□□□□ 0.23
PRKCH-216ENST00000555542 MBD3L1Q8WWY6 194 aa16.51■□□□□ 0.23
PRKCH-216ENST00000555542 IGHV3-30P01768 117 aa16.5■□□□□ 0.23
PRKCH-216ENST00000555542 IGHV3-33P01772 117 aa16.5■□□□□ 0.23
PRKCH-216ENST00000555542 IGHV3-30-3P0DP02 117 aa16.5■□□□□ 0.23
PRKCH-216ENST00000555542 IGHV3-30-5P0DP03 117 aa16.5■□□□□ 0.23
PRKCH-216ENST00000555542 ZNF674Q2M3X9 581 aa16.5■□□□□ 0.23
PRKCH-216ENST00000555542 DNLZQ5SXM8 178 aa16.5■□□□□ 0.23
PRKCH-216ENST00000555542 CDPF1Q6NVV7 123 aa16.5■□□□□ 0.23
PRKCH-216ENST00000555542 SAMD10Q9BYL1 202 aa16.5■□□□□ 0.23
PRKCH-216ENST00000555542 LRP1BQ9NZR2 4599 aa16.5■□□□□ 0.23
PRKCH-216ENST00000555542 M0R381 172 aa16.49■□□□□ 0.23
PRKCH-216ENST00000555542 RHODO00212 210 aa16.49■□□□□ 0.23
PRKCH-216ENST00000555542 H2AFB1P0C5Y9 115 aa16.49■□□□□ 0.23
PRKCH-216ENST00000555542 Q9HAA7 133 aa16.49■□□□□ 0.23
PRKCH-216ENST00000555542 S100A9P06702 114 aaKnown RBP16.48■□□□□ 0.23
PRKCH-216ENST00000555542 LINC01559Q495D7 138 aa16.48■□□□□ 0.23
PRKCH-216ENST00000555542 KRTAP4-5Q9BYR2 181 aa16.48■□□□□ 0.23
PRKCH-216ENST00000555542 SCO2A0A1W2PP80 73 aa16.47■□□□□ 0.23
PRKCH-216ENST00000555542 TMUB2Q71RG4 321 aa16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms