RNA–Protein interactions for RNA: ENST00000553612.5

GTF2A1-203, Transcript of general transcription factor IIA subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF2A1, Length 6,306 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-203ENST00000553612 SS18L1O75177 396 aaPredicted RBP6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 RFPL3SP0C7P2 107 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 ATG2AQ2TAZ0 1938 aa6.99□□□□□ -1.29
GTF2A1-203ENST00000553612 CCL5P13501 91 aa6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 IGHV3-33P01772 117 aa6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 GRNP28799 593 aaKnown RBP6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 RNF7Q9UBF6 113 aa6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 FREM1Q5H8C1 2179 aa6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 TRBV7-7A0A0K0K1E9 115 aa6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 Q6ZS46 218 aa6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 NDUFA12Q9UI09 145 aa6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 ZNF784Q8NCA9 323 aaPredicted RBP6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 CRYGDP07320 174 aa6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 SPRNQ5BIV9 151 aa6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 OBSL1O75147 1896 aa6.98□□□□□ -1.29
GTF2A1-203ENST00000553612 HILS1P60008 231 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 PLXNA3P51805 1871 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 PCNX2A6NKB5 2137 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 TMEM256-PLSCR3K7ERE1 68 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 PRCDQ00LT1 54 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 LYPD1Q8N2G4 141 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 VWA8A3KMH1 1905 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 A0A0C4DFX4 3053 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 THADAQ6YHU6 1953 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 A6NED7 52 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 ZNF876PQ49A33 203 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 SCXQ7RTU7 201 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 TRGV5A0A0B4J1U4 118 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 ARFGEF3Q5TH69 2177 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 IGHV3OR16-10A0A075B7F0 116 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 LINC01619G3V211 115 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 UBE2D3P61077 147 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 UBE2D2P62837 147 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 PLXNB3Q9ULL4 1909 aa6.97□□□□□ -1.29
GTF2A1-203ENST00000553612 AGRNO00468 2067 aa6.96□□□□□ -1.29
GTF2A1-203ENST00000553612 ZSWIM8A7E2V4 1837 aa6.96□□□□□ -1.29
GTF2A1-203ENST00000553612 I3L3M4 83 aa6.96□□□□□ -1.29
GTF2A1-203ENST00000553612 SORL1Q92673 2214 aa6.96□□□□□ -1.3
GTF2A1-203ENST00000553612 PLXNA1Q9UIW2 1896 aa6.96□□□□□ -1.3
GTF2A1-203ENST00000553612 C11orf86A6NJI1 115 aa6.96□□□□□ -1.3
GTF2A1-203ENST00000553612 LEPROTO15243 131 aa6.96□□□□□ -1.3
GTF2A1-203ENST00000553612 RPL39LQ96EH5 51 aaKnown RBP6.96□□□□□ -1.3
GTF2A1-203ENST00000553612 KIF26AQ9ULI4 1882 aaPredicted RBP6.96□□□□□ -1.3
GTF2A1-203ENST00000553612 BLCAPP62952 87 aa6.96□□□□□ -1.3
GTF2A1-203ENST00000553612 PCNX3Q9H6A9 2034 aa6.96□□□□□ -1.3
GTF2A1-203ENST00000553612 TMEM61Q8N0U2 210 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 Q5XG85 94 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 LINC01565O15544 149 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 Q6ZSV7 163 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 C5orf38Q86SI9 138 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 CCL4P13236 92 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 FHL2Q14192 279 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 SAP25Q8TEE9 199 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 WI2-2373I1.2A0A1W2PRP0 233 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 NCR3O14931 201 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 TRGV3P03979 118 aa6.95□□□□□ -1.3
GTF2A1-203ENST00000553612 IGHV3-38A0A0C4DH36 116 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 A0A0J9YY99 117 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 PLAC8L1A1L4L8 177 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 SIT1Q9Y3P8 196 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 MED13LQ71F56 2210 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 RPL36AP83881 106 aaKnown RBP6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 RPL36ALQ969Q0 106 aaKnown RBP6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 VSIG2Q96IQ7 327 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 SMIM2Q9BVW6 85 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 ROS1P08922 2347 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 P0DMU3 169 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 FAM231AP0DMU4 169 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 FAM231CP0DMU5 169 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 PIK3CD-AS1Q5SR53 167 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 PRR25Q96S07 402 aa6.94□□□□□ -1.3
GTF2A1-203ENST00000553612 NOTCH3Q9UM47 2321 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 IGHV3-30P01768 117 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 IGHV3-30-5P0DP03 117 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 RPL39P62891 51 aaKnown RBP6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 UBE2BP63146 152 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 PRR20EP86478 221 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 PRR20CP86479 221 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 PRR20DP86480 221 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 PRR20BP86481 221 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 PRR20AP86496 221 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 Q6P435 159 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 C9orf139Q6ZV77 190 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 WDR86Q86TI4 376 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 TRBV27A0A0K0K1C4 114 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 IGHV3-11P01762 117 aa6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 OPRPNQ99935 248 aaPredicted RBP6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 EGR2P11161 476 aaPredicted RBP6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.93□□□□□ -1.3
GTF2A1-203ENST00000553612 CCL24O00175 119 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 C11orf45Q8TAV5 145 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 CXorf51AA0A1B0GTR3 108 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 SRRM4A7MD48 611 aaKnown RBP6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 POM121L12Q8N7R1 296 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 SPTBN2O15020 2390 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 EML6Q6ZMW3 1958 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 SUMO4Q6EEV6 95 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 UTRNP46939 3433 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 WNK2Q9Y3S1 2297 aa6.92□□□□□ -1.3
GTF2A1-203ENST00000553612 SLPIP03973 132 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms