RNA–Protein interactions for RNA: ENST00000553145.1

HDAC4-217, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-217ENST00000553145 SLC51BQ86UW2 128 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 C9orf62Q8N4C0 152 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 NHLRC2Q8NBF2 726 aa12.91□□□□□ -0.34
HDAC4-217ENST00000553145 TRAV1-1A0A0B4J248 108 aa12.9□□□□□ -0.34
HDAC4-217ENST00000553145 KRBOX1C9JBD0 128 aa12.9□□□□□ -0.34
HDAC4-217ENST00000553145 GYPEP15421 78 aa12.9□□□□□ -0.34
HDAC4-217ENST00000553145 GATA1P15976 413 aaPredicted RBP12.9□□□□□ -0.34
HDAC4-217ENST00000553145 ASIPP42127 132 aa12.9□□□□□ -0.34
HDAC4-217ENST00000553145 ZNF674Q2M3X9 581 aa12.9□□□□□ -0.34
HDAC4-217ENST00000553145 EIF5AL1Q6IS14 154 aaKnown RBP12.9□□□□□ -0.34
HDAC4-217ENST00000553145 ZNF575Q86XF7 245 aa12.9□□□□□ -0.34
HDAC4-217ENST00000553145 PTH2Q96A98 100 aa12.9□□□□□ -0.34
HDAC4-217ENST00000553145 GNG13Q9P2W3 67 aa12.9□□□□□ -0.34
HDAC4-217ENST00000553145 S100A4P26447 101 aaKnown RBP12.89□□□□□ -0.35
HDAC4-217ENST00000553145 SOHLH1Q5JUK2 328 aa12.89□□□□□ -0.35
HDAC4-217ENST00000553145 FAM162BQ5T6X4 162 aa12.89□□□□□ -0.35
HDAC4-217ENST00000553145 LYPD5Q6UWN5 251 aa12.89□□□□□ -0.35
HDAC4-217ENST00000553145 NEGR1Q7Z3B1 354 aa12.89□□□□□ -0.35
HDAC4-217ENST00000553145 IGHV3-73A0A0B4J1V6 119 aa12.88□□□□□ -0.35
HDAC4-217ENST00000553145 GRIFINA4D1Z8 144 aa12.88□□□□□ -0.35
HDAC4-217ENST00000553145 H3BVH4 76 aa12.88□□□□□ -0.35
HDAC4-217ENST00000553145 SRIP30626 198 aa12.88□□□□□ -0.35
HDAC4-217ENST00000553145 C6orf223Q8N319 242 aa12.88□□□□□ -0.35
HDAC4-217ENST00000553145 MANBALQ9NQG1 85 aa12.88□□□□□ -0.35
HDAC4-217ENST00000553145 A0A1B0GVG6 124 aa12.87□□□□□ -0.35
HDAC4-217ENST00000553145 NXPH4O95158 308 aa12.87□□□□□ -0.35
HDAC4-217ENST00000553145 S100A9P06702 114 aaKnown RBP12.87□□□□□ -0.35
HDAC4-217ENST00000553145 LINC01559Q495D7 138 aa12.87□□□□□ -0.35
HDAC4-217ENST00000553145 DNLZQ5SXM8 178 aa12.87□□□□□ -0.35
HDAC4-217ENST00000553145 PCNPQ8WW12 178 aaKnown RBP12.87□□□□□ -0.35
HDAC4-217ENST00000553145 MLST8Q9BVC4 326 aa12.87□□□□□ -0.35
HDAC4-217ENST00000553145 IL36BQ9NZH7 164 aa12.87□□□□□ -0.35
HDAC4-217ENST00000553145 TMSB15BA0A087X1C1 80 aa12.86□□□□□ -0.35
HDAC4-217ENST00000553145 TTC32Q5I0X7 151 aa12.86□□□□□ -0.35
HDAC4-217ENST00000553145 SLC25A29Q8N8R3 303 aa12.86□□□□□ -0.35
HDAC4-217ENST00000553145 DERL1Q9BUN8 251 aa12.86□□□□□ -0.35
HDAC4-217ENST00000553145 ARMS2P0C7Q2 107 aa12.85□□□□□ -0.35
HDAC4-217ENST00000553145 BAGE2Q86Y30 109 aa12.85□□□□□ -0.35
HDAC4-217ENST00000553145 C11orf52Q96A22 123 aa12.85□□□□□ -0.35
HDAC4-217ENST00000553145 PARLQ9H300 379 aa12.85□□□□□ -0.35
HDAC4-217ENST00000553145 JPT2Q9H910 190 aa12.85□□□□□ -0.35
HDAC4-217ENST00000553145 PKD1P98161 4303 aa12.85□□□□□ -0.35
HDAC4-217ENST00000553145 A0A1W2PPQ1 181 aa12.84□□□□□ -0.35
HDAC4-217ENST00000553145 SIVA1O15304 175 aa12.84□□□□□ -0.35
HDAC4-217ENST00000553145 CIDEAO60543 219 aa12.84□□□□□ -0.35
HDAC4-217ENST00000553145 RPL35P42766 123 aaKnown RBP12.84□□□□□ -0.35
HDAC4-217ENST00000553145 TNP2Q05952 138 aa12.84□□□□□ -0.35
HDAC4-217ENST00000553145 PIK3CD-AS1Q5SR53 167 aa12.84□□□□□ -0.35
HDAC4-217ENST00000553145 DMRTA1Q5VZB9 504 aa12.84□□□□□ -0.35
HDAC4-217ENST00000553145 TRBV6-4A0A1B0GX49 114 aa12.83□□□□□ -0.36
HDAC4-217ENST00000553145 TEX46H3BTG2 121 aa12.83□□□□□ -0.36
HDAC4-217ENST00000553145 RPL19P84098 196 aaKnown RBP12.83□□□□□ -0.36
HDAC4-217ENST00000553145 Q6ZSN1 163 aa12.83□□□□□ -0.36
HDAC4-217ENST00000553145 TXNDC17Q9BRA2 123 aa12.83□□□□□ -0.36
HDAC4-217ENST00000553145 SAMD10Q9BYL1 202 aa12.83□□□□□ -0.36
HDAC4-217ENST00000553145 SCRT2Q9NQ03 307 aa12.83□□□□□ -0.36
HDAC4-217ENST00000553145 DYNC1H1Q14204 4646 aaKnown RBP12.82□□□□□ -0.36
HDAC4-217ENST00000553145 A8MWV9 139 aa12.82□□□□□ -0.36
HDAC4-217ENST00000553145 RHOHQ15669 191 aa12.82□□□□□ -0.36
HDAC4-217ENST00000553145 UFSP1Q6NVU6 142 aa12.82□□□□□ -0.36
HDAC4-217ENST00000553145 WFDC10BQ8IUB3 73 aa12.82□□□□□ -0.36
HDAC4-217ENST00000553145 MGST1P10620 155 aaKnown RBP12.81□□□□□ -0.36
HDAC4-217ENST00000553145 PRR27Q6MZM9 219 aa12.81□□□□□ -0.36
HDAC4-217ENST00000553145 PRADC1Q9BSG0 188 aa12.81□□□□□ -0.36
HDAC4-217ENST00000553145 DNAH11Q96DT5 4516 aa12.8□□□□□ -0.36
HDAC4-217ENST00000553145 NKX2-5P52952 324 aaPredicted RBP12.8□□□□□ -0.36
HDAC4-217ENST00000553145 MEF2BQ02080 365 aaPredicted RBP12.8□□□□□ -0.36
HDAC4-217ENST00000553145 CENPWQ5EE01 88 aa12.8□□□□□ -0.36
HDAC4-217ENST00000553145 ALKAL2Q6UX46 152 aa12.8□□□□□ -0.36
HDAC4-217ENST00000553145 ZFP2Q6ZN57 461 aa12.8□□□□□ -0.36
HDAC4-217ENST00000553145 SYT8Q8NBV8 401 aa12.8□□□□□ -0.36
HDAC4-217ENST00000553145 M0R381 172 aa12.79□□□□□ -0.36
HDAC4-217ENST00000553145 IFNA1P01562 189 aa12.79□□□□□ -0.36
HDAC4-217ENST00000553145 IGLV2-8P01709 118 aa12.79□□□□□ -0.36
HDAC4-217ENST00000553145 BCL2P10415 239 aa12.79□□□□□ -0.36
HDAC4-217ENST00000553145 LINC00315P59091 139 aa12.79□□□□□ -0.36
HDAC4-217ENST00000553145 SH2D6Q7Z4S9 175 aa12.79□□□□□ -0.36
HDAC4-217ENST00000553145 PHLDA3Q9Y5J5 127 aa12.79□□□□□ -0.36
HDAC4-217ENST00000553145 PKHD1P08F94 4074 aa12.79□□□□□ -0.36
HDAC4-217ENST00000553145 RAB19A4D1S5 217 aa12.78□□□□□ -0.36
HDAC4-217ENST00000553145 Q9UF83 564 aa12.78□□□□□ -0.36
HDAC4-217ENST00000553145 A0A087WWL8 130 aa12.77□□□□□ -0.37
HDAC4-217ENST00000553145 PDE6DO43924 150 aa12.77□□□□□ -0.37
HDAC4-217ENST00000553145 CXCL1P09341 107 aa12.77□□□□□ -0.37
HDAC4-217ENST00000553145 MED14OSP0DP75 135 aa12.77□□□□□ -0.37
HDAC4-217ENST00000553145 TIRAPP58753 221 aa12.77□□□□□ -0.37
HDAC4-217ENST00000553145 C14orf178Q8N769 122 aaPredicted RBP12.77□□□□□ -0.37
HDAC4-217ENST00000553145 SFRP2Q96HF1 295 aa12.77□□□□□ -0.37
HDAC4-217ENST00000553145 VAX2Q9UIW0 290 aa12.77□□□□□ -0.37
HDAC4-217ENST00000553145 BOLA1Q9Y3E2 137 aa12.77□□□□□ -0.37
HDAC4-217ENST00000553145 KIAA1109Q2LD37 5005 aa12.76□□□□□ -0.37
HDAC4-217ENST00000553145 TRBV20OR9-2A0A075B6H5 130 aa12.76□□□□□ -0.37
HDAC4-217ENST00000553145 CRYGDP07320 174 aa12.76□□□□□ -0.37
HDAC4-217ENST00000553145 LINC00694P0DN24 101 aa12.76□□□□□ -0.37
HDAC4-217ENST00000553145 FAM74A4Q5TZK3 123 aa12.76□□□□□ -0.37
HDAC4-217ENST00000553145 Q6ZRN7 208 aaPredicted RBP12.76□□□□□ -0.37
HDAC4-217ENST00000553145 ZFP82Q8N141 532 aa12.76□□□□□ -0.37
HDAC4-217ENST00000553145 OR10AG1Q8NH19 301 aa12.76□□□□□ -0.37
HDAC4-217ENST00000553145 MED9Q9NWA0 146 aa12.76□□□□□ -0.37
HDAC4-217ENST00000553145 TNFRSF18Q9Y5U5 241 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms