RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TRAV34A0A0B4J273 112 aa8.2□□□□□ -1.1
CKAP4-202ENST00000552828 TRAV21A0A0B4J279 112 aa8.2□□□□□ -1.1
CKAP4-202ENST00000552828 A0A1W2PPQ1 181 aa8.2□□□□□ -1.1
CKAP4-202ENST00000552828 H3BNG1 76 aa8.2□□□□□ -1.1
CKAP4-202ENST00000552828 SRP19P09132 144 aaKnown RBP8.2□□□□□ -1.1
CKAP4-202ENST00000552828 CCL20P78556 96 aa8.2□□□□□ -1.1
CKAP4-202ENST00000552828 FAM159AQ6UWV7 190 aa8.2□□□□□ -1.1
CKAP4-202ENST00000552828 Q6ZQT7 251 aa8.2□□□□□ -1.1
CKAP4-202ENST00000552828 SCRT2Q9NQ03 307 aa8.2□□□□□ -1.1
CKAP4-202ENST00000552828 MANBALQ9NQG1 85 aa8.2□□□□□ -1.1
CKAP4-202ENST00000552828 TRAV26-1A0A087WT03 109 aa8.19□□□□□ -1.1
CKAP4-202ENST00000552828 M0R036 132 aa8.19□□□□□ -1.1
CKAP4-202ENST00000552828 KRTAP10-2P60368 255 aa8.19□□□□□ -1.1
CKAP4-202ENST00000552828 MUC21Q5SSG8 566 aa8.19□□□□□ -1.1
CKAP4-202ENST00000552828 FMC1Q96HJ9 113 aa8.19□□□□□ -1.1
CKAP4-202ENST00000552828 C8orf49Q96NF6 230 aa8.19□□□□□ -1.1
CKAP4-202ENST00000552828 GSN-AS1Q9NRJ2 163 aa8.19□□□□□ -1.1
CKAP4-202ENST00000552828 GNG13Q9P2W3 67 aa8.19□□□□□ -1.1
CKAP4-202ENST00000552828 B4DEV8 164 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 GCGP01275 180 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 IFNA1P01562 189 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 HOXA5P20719 270 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 AKR1C3P42330 323 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 UBE2G1P62253 170 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 DAZ2Q13117 558 aaKnown RBP8.18□□□□□ -1.1
CKAP4-202ENST00000552828 OR5I1Q13606 314 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 ESRGQ1W209 222 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 IBA57Q5T440 356 aaKnown RBP8.18□□□□□ -1.1
CKAP4-202ENST00000552828 C11orf72Q8NBR9 251 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 NAGKQ9UJ70 344 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 TP53TG3Q9ULZ0 132 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 ZFP30Q9Y2G7 519 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 MRPS16Q9Y3D3 137 aaKnown RBP8.18□□□□□ -1.1
CKAP4-202ENST00000552828 KLF12Q9Y4X4 402 aa8.18□□□□□ -1.1
CKAP4-202ENST00000552828 TRGV11A0A075B6L2 103 aa8.17□□□□□ -1.1
CKAP4-202ENST00000552828 S100A9P06702 114 aaKnown RBP8.17□□□□□ -1.1
CKAP4-202ENST00000552828 PFN1P07737 140 aaKnown RBP8.17□□□□□ -1.1
CKAP4-202ENST00000552828 RAB5AP20339 215 aa8.17□□□□□ -1.1
CKAP4-202ENST00000552828 TAGLN2P37802 199 aaKnown RBP8.17□□□□□ -1.1
CKAP4-202ENST00000552828 TMEM183BQ1AE95 376 aa8.17□□□□□ -1.1
CKAP4-202ENST00000552828 TDRG1Q3Y452 100 aa8.17□□□□□ -1.1
CKAP4-202ENST00000552828 Q86TA4 180 aa8.17□□□□□ -1.1
CKAP4-202ENST00000552828 KCNS1Q96KK3 526 aa8.17□□□□□ -1.1
CKAP4-202ENST00000552828 TXNDC17Q9BRA2 123 aa8.17□□□□□ -1.1
CKAP4-202ENST00000552828 FAT1Q14517 4588 aa8.16□□□□□ -1.1
CKAP4-202ENST00000552828 TRBV6-1A0A0K0K1D8 114 aa8.16□□□□□ -1.1
CKAP4-202ENST00000552828 C5orf52A6NGY3 159 aa8.16□□□□□ -1.1
CKAP4-202ENST00000552828 S100A8P05109 93 aa8.16□□□□□ -1.1
CKAP4-202ENST00000552828 ZNF80P51504 273 aaPredicted RBP8.16□□□□□ -1.1
CKAP4-202ENST00000552828 TCL1AP56279 114 aa8.16□□□□□ -1.1
CKAP4-202ENST00000552828 S100A12P80511 92 aa8.16□□□□□ -1.1
CKAP4-202ENST00000552828 ZNF415Q09FC8 603 aa8.16□□□□□ -1.1
CKAP4-202ENST00000552828 PNRC1Q12796 327 aaPredicted RBP8.16□□□□□ -1.1
CKAP4-202ENST00000552828 TMEM183AQ8IXX5 376 aa8.16□□□□□ -1.1
CKAP4-202ENST00000552828 SDF2L1Q9HCN8 221 aa8.16□□□□□ -1.1
CKAP4-202ENST00000552828 VPS13BQ7Z7G8 4022 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 TRGV1A0A0A0MS02 117 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 A0A0J9YY99 117 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 SCO2A0A1W2PP80 73 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 GAGE12BA1L429 117 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 FABP5P3A8MUU1 101 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 GNRH2O43555 120 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 GAGE7O76087 117 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 GAGE12FP0CL80 117 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 GAGE12GP0CL81 117 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 GAGE12IP0CL82 117 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 MEF2BQ02080 365 aaPredicted RBP8.15□□□□□ -1.1
CKAP4-202ENST00000552828 Q6ZTI0 123 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 C18orf15Q96N68 181 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 TMEM242Q9NWH2 141 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 MDFICQ9P1T7 246 aa8.15□□□□□ -1.1
CKAP4-202ENST00000552828 SPINK4O60575 86 aa8.14□□□□□ -1.11
CKAP4-202ENST00000552828 LTAP01374 205 aa8.14□□□□□ -1.11
CKAP4-202ENST00000552828 BCL2P10415 239 aa8.14□□□□□ -1.11
CKAP4-202ENST00000552828 Q6ZRN7 208 aaPredicted RBP8.14□□□□□ -1.11
CKAP4-202ENST00000552828 COX8CQ7Z4L0 72 aa8.14□□□□□ -1.11
CKAP4-202ENST00000552828 SPXQ9BT56 116 aa8.14□□□□□ -1.11
CKAP4-202ENST00000552828 VAX2Q9UIW0 290 aa8.14□□□□□ -1.11
CKAP4-202ENST00000552828 DMBT1Q9UGM3 2413 aaPredicted RBP8.13□□□□□ -1.11
CKAP4-202ENST00000552828 TRGV2A0A075B6R0 118 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 IGHV3-16A0A0C4DH30 117 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 PDE6DO43924 150 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 TYMSP04818 313 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 S100A6P06703 90 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 SMIM6P0DI80 62 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 RPL35P42766 123 aaKnown RBP8.13□□□□□ -1.11
CKAP4-202ENST00000552828 AKR1D1P51857 326 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 FAM162BQ5T6X4 162 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 BAGE2Q86Y30 109 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 C11orf52Q96A22 123 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 ZC2HC1AQ96GY0 325 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 VSIG2Q96IQ7 327 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 C11orf21Q9P2W6 132 aa8.13□□□□□ -1.11
CKAP4-202ENST00000552828 A0A096LPF7 62 aa8.12□□□□□ -1.11
CKAP4-202ENST00000552828 ORM1P02763 201 aa8.12□□□□□ -1.11
CKAP4-202ENST00000552828 CRIP1P50238 77 aa8.12□□□□□ -1.11
CKAP4-202ENST00000552828 LINC00315P59091 139 aa8.12□□□□□ -1.11
CKAP4-202ENST00000552828 SNRPEP62304 92 aaKnown RBP8.12□□□□□ -1.11
CKAP4-202ENST00000552828 ZFP82Q8N141 532 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 146 ms