RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 TRAV9-1A0A075B6T8 112 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 IGLV2-8P01709 118 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 LAGE3Q14657 143 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 C12orf54Q6X4T0 127 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 ATP5L2Q7Z4Y8 100 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 CHTOPQ9Y3Y2 248 aaKnown RBP8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 GAGE12JA6NER3 117 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 ZNF815PA8K554 130 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 NDUFS8O00217 210 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 GAGE1Q13065 139 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 GAGE4Q13068 117 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 GAGE5Q13069 117 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 GAGE13Q4V321 117 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 CHCHD5Q9BSY4 110 aa8.3□□□□□ -1.08
TGFBR1-209ENST00000552516 PPP1R17O96001 155 aa8.29□□□□□ -1.08
TGFBR1-209ENST00000552516 DEFB121Q5J5C9 76 aa8.29□□□□□ -1.08
TGFBR1-209ENST00000552516 IGHV7-4-1A0A0J9YVY3 117 aa8.29□□□□□ -1.08
TGFBR1-209ENST00000552516 IGKCP01834 107 aa8.29□□□□□ -1.08
TGFBR1-209ENST00000552516 ZNF843Q8N446 348 aa8.29□□□□□ -1.08
TGFBR1-209ENST00000552516 NPBQ8NG41 125 aa8.29□□□□□ -1.08
TGFBR1-209ENST00000552516 TP53TG3Q9ULZ0 132 aa8.29□□□□□ -1.08
TGFBR1-209ENST00000552516 GAS8-AS1O95177 125 aa8.29□□□□□ -1.08
TGFBR1-209ENST00000552516 OR13C6PQ8NH95 151 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 LY96Q9Y6Y9 160 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 FBXL19-AS1Q494R0 122 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 VPREB3Q9UKI3 123 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 TP53TG1Q9Y2A0 90 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 COL5A1P20908 1838 aaPredicted RBP8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 DSCR9P59020 149 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 RNF114Q9Y508 228 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 SVEP1Q4LDE5 3571 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 DPM2O94777 84 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 PCP2Q8IVA1 136 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 LINC00469Q8N7U9 141 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 K7ERJ3 54 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 PDE6HQ13956 83 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 C11orf71Q6IPW1 123 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 DPH3P1Q9H4G8 78 aa8.28□□□□□ -1.08
TGFBR1-209ENST00000552516 LYPD1Q8N2G4 141 aa8.27□□□□□ -1.08
TGFBR1-209ENST00000552516 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.08
TGFBR1-209ENST00000552516 MRPL35Q9NZE8 188 aaKnown RBP8.27□□□□□ -1.08
TGFBR1-209ENST00000552516 MUC4Q99102 2169 aa8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 SMPXQ9UHP9 88 aa8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 FABP2P12104 132 aa8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 NXT2Q9NPJ8 142 aaKnown RBP8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 ATP5LO75964 103 aa8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 P0DMU3 169 aa8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 FAM231AP0DMU4 169 aa8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 FAM231CP0DMU5 169 aa8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 NDUFA4O00483 81 aa8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 MRAPQ8TCY5 172 aa8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 MDFICQ9P1T7 246 aa8.27□□□□□ -1.09
TGFBR1-209ENST00000552516 LINC01619G3V211 115 aa8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 OPRPNQ99935 248 aaPredicted RBP8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 SDHAF1A6NFY7 115 aa8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 IGLC2P0DOY2 106 aa8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 Q0VG73 95 aa8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 CHCHD1Q96BP2 118 aaKnown RBP8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 RPL39P62891 51 aaKnown RBP8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 C2orf66Q6UXQ4 117 aa8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 LY6G5BQ8NDX9 201 aa8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 CRIP1P50238 77 aa8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 TMEM14CQ9P0S9 112 aa8.26□□□□□ -1.09
TGFBR1-209ENST00000552516 CSMD1Q96PZ7 3565 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 A0A0J9YY99 117 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 NPSP0C0P6 89 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 CITED2Q99967 270 aaPredicted RBP8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 TEX15Q9BXT5 2789 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 PTPRBP23467 1997 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 PLP1P60201 277 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 C20orf173Q96LM9 149 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 MEGF9Q9H1U4 602 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 WFDC10AQ9H1F0 79 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 ODF3BA8MYP8 253 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 VWC2LB2RUY7 222 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 CDKN1BP46527 198 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 CEMP1Q6PRD7 247 aaPredicted RBP8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 TMEM61Q8N0U2 210 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 ZNRF2Q8NHG8 242 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 SPCS1Q9Y6A9 102 aa8.25□□□□□ -1.09
TGFBR1-209ENST00000552516 PET117Q6UWS5 81 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 C8orf31Q8N9H6 132 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 IGKV2-29A2NJV5 120 aaPredicted RBP8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 CRYGCP07315 174 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 SMAD5-AS1Q9Y6J3 95 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 ZANQ9Y493 2812 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 DUSP14O95147 198 aaKnown RBP8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 SMIM13P0DJ93 91 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 IGLC3P0DOY3 106 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 SRSF8Q9BRL6 282 aaKnown RBP8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 NOP10Q9NPE3 64 aaKnown RBP8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 ZNF492Q9P255 531 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 PYGO2Q9BRQ0 406 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 GCN1Q92616 2671 aaKnown RBP8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 LY6LH3BQJ8 138 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 FAM231DQ6ZW35 169 aa8.24□□□□□ -1.09
TGFBR1-209ENST00000552516 TNRC6BQ9UPQ9 1833 aaKnown RBP8.23□□□□□ -1.09
TGFBR1-209ENST00000552516 WI2-2373I1.2A0A1W2PRP0 233 aa8.23□□□□□ -1.09
TGFBR1-209ENST00000552516 CCL24O00175 119 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 134.2 ms