RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 PKHD1L1Q86WI1 4243 aa9.31□□□□□ -0.92
CHMP1A-210ENST00000551981 A0A1W2PPV4 95 aa9.3□□□□□ -0.92
CHMP1A-210ENST00000551981 PGPEP1LA6NFU8 196 aa9.3□□□□□ -0.92
CHMP1A-210ENST00000551981 SIX6O95475 246 aa9.3□□□□□ -0.92
CHMP1A-210ENST00000551981 IGLV2-8P01709 118 aa9.3□□□□□ -0.92
CHMP1A-210ENST00000551981 GNG5P63218 68 aa9.3□□□□□ -0.92
CHMP1A-210ENST00000551981 CYCSP99999 105 aaKnown RBP9.3□□□□□ -0.92
CHMP1A-210ENST00000551981 ZFP69Q49AA0 526 aa9.3□□□□□ -0.92
CHMP1A-210ENST00000551981 ZFP2Q6ZN57 461 aa9.3□□□□□ -0.92
CHMP1A-210ENST00000551981 IGKV2D-24A0A075B6R9 120 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 RNF222A6NCQ9 220 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 A8MWV9 139 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 H0YIZ8 118 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 K7EQM0 130 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 EIF3GO75821 320 aaKnown RBP eCLIP9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 GCGP01275 180 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 LINC00694P0DN24 101 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 FGF8P55075 233 aaPredicted RBP9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 MZT2BQ6NZ67 158 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 CYB561D1Q8N8Q1 229 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 SGK494Q96LW2 274 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 C11orf21Q9P2W6 132 aa9.29□□□□□ -0.92
CHMP1A-210ENST00000551981 ZNF80P51504 273 aaPredicted RBP9.28□□□□□ -0.92
CHMP1A-210ENST00000551981 CCDC32Q9BV29 185 aa9.28□□□□□ -0.92
CHMP1A-210ENST00000551981 PARLQ9H300 379 aa9.28□□□□□ -0.92
CHMP1A-210ENST00000551981 HSPB11Q9Y547 144 aa9.28□□□□□ -0.92
CHMP1A-210ENST00000551981 RNASE3P12724 160 aaKnown RBP9.27□□□□□ -0.93
CHMP1A-210ENST00000551981 LGALSLQ3ZCW2 172 aaPredicted RBP9.27□□□□□ -0.93
CHMP1A-210ENST00000551981 SMUG1Q53HV7 270 aa9.27□□□□□ -0.93
CHMP1A-210ENST00000551981 PIK3CD-AS1Q5SR53 167 aa9.27□□□□□ -0.93
CHMP1A-210ENST00000551981 KCNIP4Q6PIL6 250 aa9.27□□□□□ -0.93
CHMP1A-210ENST00000551981 TMEM75Q8N9X5 138 aa9.27□□□□□ -0.93
CHMP1A-210ENST00000551981 OR10G9Q8NGN4 311 aa9.27□□□□□ -0.93
CHMP1A-210ENST00000551981 OR2T35Q8NGX2 323 aa9.27□□□□□ -0.93
CHMP1A-210ENST00000551981 IGLV2-11P01706 119 aa9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 TCRAP04437 139 aa9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 PET100P0DJ07 73 aa9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 S100A4P26447 101 aaKnown RBP9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 ELOBQ15370 118 aa9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 C14orf177Q52M58 125 aa9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 NIT1Q86X76 327 aa9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 C5orf17Q8NAS9 161 aa9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 SMIM3Q9BZL3 60 aa9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 KLK12Q9UKR0 248 aa9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 PSG8Q9UQ74 426 aa9.26□□□□□ -0.93
CHMP1A-210ENST00000551981 A0A087WX48 190 aa9.25□□□□□ -0.93
CHMP1A-210ENST00000551981 RPL37AP61513 92 aaKnown RBP9.25□□□□□ -0.93
CHMP1A-210ENST00000551981 PPP1R1CQ8WVI7 109 aa9.25□□□□□ -0.93
CHMP1A-210ENST00000551981 UBE2WQ96B02 151 aa9.25□□□□□ -0.93
CHMP1A-210ENST00000551981 LINC00479Q96M42 142 aa9.25□□□□□ -0.93
CHMP1A-210ENST00000551981 CHCHD7Q9BUK0 85 aa9.25□□□□□ -0.93
CHMP1A-210ENST00000551981 HMGB3O15347 200 aaKnown RBP9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 ARL14EPLP0DKL9 152 aa9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 RPL12P30050 165 aaKnown RBP9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 RAB2AP61019 212 aa9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 FLI1Q01543 452 aaPredicted RBP9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 SAPCD1Q5SSQ6 148 aa9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 PRNTQ86SH4 94 aa9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 C14orf178Q8N769 122 aaPredicted RBP9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 OR10G7Q8NGN6 311 aa9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 DNAJC30Q96LL9 226 aa9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 SAMD10Q9BYL1 202 aa9.24□□□□□ -0.93
CHMP1A-210ENST00000551981 RHODO00212 210 aa9.23□□□□□ -0.93
CHMP1A-210ENST00000551981 ASIPP42127 132 aa9.23□□□□□ -0.93
CHMP1A-210ENST00000551981 Q0VG73 95 aa9.23□□□□□ -0.93
CHMP1A-210ENST00000551981 ENKURQ8TC29 256 aa9.23□□□□□ -0.93
CHMP1A-210ENST00000551981 MPC2O95563 127 aa9.22□□□□□ -0.93
CHMP1A-210ENST00000551981 CDC34P49427 236 aaPredicted RBP9.22□□□□□ -0.93
CHMP1A-210ENST00000551981 DMRTA1Q5VZB9 504 aa9.22□□□□□ -0.93
CHMP1A-210ENST00000551981 UFSP1Q6NVU6 142 aa9.22□□□□□ -0.93
CHMP1A-210ENST00000551981 ATRAIDQ6UW56 229 aa9.22□□□□□ -0.93
CHMP1A-210ENST00000551981 C1orf43Q9BWL3 253 aa9.22□□□□□ -0.93
CHMP1A-210ENST00000551981 Q9UF83 564 aa9.22□□□□□ -0.93
CHMP1A-210ENST00000551981 H2BFSP57053 126 aa9.21□□□□□ -0.94
CHMP1A-210ENST00000551981 OR2G3Q8NGZ4 309 aa9.21□□□□□ -0.94
CHMP1A-210ENST00000551981 JPT2Q9H910 190 aa9.21□□□□□ -0.94
CHMP1A-210ENST00000551981 IL36BQ9NZH7 164 aa9.21□□□□□ -0.94
CHMP1A-210ENST00000551981 EPDR1Q9UM22 224 aa9.21□□□□□ -0.94
CHMP1A-210ENST00000551981 IGKV3D-20A0A0C4DH25 116 aa9.2□□□□□ -0.94
CHMP1A-210ENST00000551981 CRPP02741 224 aa9.2□□□□□ -0.94
CHMP1A-210ENST00000551981 STAG3L2P0CL84 134 aa9.2□□□□□ -0.94
CHMP1A-210ENST00000551981 STAG3L3P0CL85 134 aa9.2□□□□□ -0.94
CHMP1A-210ENST00000551981 SUMO1P63165 101 aaKnown RBP9.2□□□□□ -0.94
CHMP1A-210ENST00000551981 WFDC1Q9HC57 220 aa9.2□□□□□ -0.94
CHMP1A-210ENST00000551981 FABP5P3A8MUU1 101 aa9.19□□□□□ -0.94
CHMP1A-210ENST00000551981 H3BVH4 76 aa9.19□□□□□ -0.94
CHMP1A-210ENST00000551981 GCHFRP30047 84 aa9.19□□□□□ -0.94
CHMP1A-210ENST00000551981 FAM74A4Q5TZK3 123 aa9.19□□□□□ -0.94
CHMP1A-210ENST00000551981 OR11H4Q8NGC9 324 aa9.19□□□□□ -0.94
CHMP1A-210ENST00000551981 SUN5Q8TC36 379 aa9.19□□□□□ -0.94
CHMP1A-210ENST00000551981 TMEM167BQ9NRX6 74 aa9.19□□□□□ -0.94
CHMP1A-210ENST00000551981 RNF213Q63HN8 5207 aa9.18□□□□□ -0.94
CHMP1A-210ENST00000551981 B4DEV8 164 aa9.18□□□□□ -0.94
CHMP1A-210ENST00000551981 TMEM262E9PQX1 116 aa9.18□□□□□ -0.94
CHMP1A-210ENST00000551981 INMT-MINDY4F8WBC2 141 aa9.18□□□□□ -0.94
CHMP1A-210ENST00000551981 SSNA1O43805 119 aa9.18□□□□□ -0.94
CHMP1A-210ENST00000551981 RPL36AP83881 106 aaKnown RBP9.18□□□□□ -0.94
CHMP1A-210ENST00000551981 RPL36ALQ969Q0 106 aaKnown RBP9.18□□□□□ -0.94
CHMP1A-210ENST00000551981 RAB24Q969Q5 203 aa9.18□□□□□ -0.94
CHMP1A-210ENST00000551981 DAZAP1Q96EP5 407 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 219.6 ms