RNA–Protein interactions for RNA: ENST00000550013.1

RAB5C-205, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-205ENST00000550013 GAGE1Q13065 139 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 GAGE4Q13068 117 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 GAGE5Q13069 117 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 GAGE13Q4V321 117 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 OR10G9Q8NGN4 311 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 OR10G7Q8NGN6 311 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 PTH2Q96A98 100 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 Q9UF83 564 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 PSG8Q9UQ74 426 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 FAT3Q8TDW7 4589 aa10.16□□□□□ -0.78
RAB5C-205ENST00000550013 IGLV2-11P01706 119 aa10.15□□□□□ -0.78
RAB5C-205ENST00000550013 PET100P0DJ07 73 aa10.15□□□□□ -0.78
RAB5C-205ENST00000550013 LINC00694P0DN24 101 aa10.15□□□□□ -0.78
RAB5C-205ENST00000550013 IFITM3Q01628 133 aa10.15□□□□□ -0.78
RAB5C-205ENST00000550013 C5orf17Q8NAS9 161 aa10.15□□□□□ -0.78
RAB5C-205ENST00000550013 DEFB104AQ8WTQ1 72 aa10.15□□□□□ -0.78
RAB5C-205ENST00000550013 S100ZQ8WXG8 99 aa10.15□□□□□ -0.78
RAB5C-205ENST00000550013 BAALCQ8WXS3 180 aa10.15□□□□□ -0.78
RAB5C-205ENST00000550013 PARLQ9H300 379 aa10.15□□□□□ -0.78
RAB5C-205ENST00000550013 TRAV8-3A0A0A6YYJ7 113 aa10.14□□□□□ -0.79
RAB5C-205ENST00000550013 SERTM2A0A1B0GWG4 89 aa10.14□□□□□ -0.79
RAB5C-205ENST00000550013 SSNA1O43805 119 aa10.14□□□□□ -0.79
RAB5C-205ENST00000550013 UPK1BO75841 260 aa10.14□□□□□ -0.79
RAB5C-205ENST00000550013 SMUG1Q53HV7 270 aa10.14□□□□□ -0.79
RAB5C-205ENST00000550013 SCXQ7RTU7 201 aa10.14□□□□□ -0.79
RAB5C-205ENST00000550013 PRNTQ86SH4 94 aa10.14□□□□□ -0.79
RAB5C-205ENST00000550013 STAG3L2P0CL84 134 aa10.13□□□□□ -0.79
RAB5C-205ENST00000550013 STAG3L3P0CL85 134 aa10.13□□□□□ -0.79
RAB5C-205ENST00000550013 CDC34P49427 236 aaPredicted RBP10.13□□□□□ -0.79
RAB5C-205ENST00000550013 FLI1Q01543 452 aaPredicted RBP10.13□□□□□ -0.79
RAB5C-205ENST00000550013 LINC00299Q6ZSB3 139 aa10.13□□□□□ -0.79
RAB5C-205ENST00000550013 OR2T35Q8NGX2 323 aa10.13□□□□□ -0.79
RAB5C-205ENST00000550013 DNAJC30Q96LL9 226 aa10.13□□□□□ -0.79
RAB5C-205ENST00000550013 SAMD10Q9BYL1 202 aa10.13□□□□□ -0.79
RAB5C-205ENST00000550013 JPT2Q9H910 190 aa10.13□□□□□ -0.79
RAB5C-205ENST00000550013 GGTLC3B5MD39 225 aa10.12□□□□□ -0.79
RAB5C-205ENST00000550013 K7EQM0 130 aa10.12□□□□□ -0.79
RAB5C-205ENST00000550013 GCHFRP30047 84 aa10.12□□□□□ -0.79
RAB5C-205ENST00000550013 LGALSLQ3ZCW2 172 aaPredicted RBP10.12□□□□□ -0.79
RAB5C-205ENST00000550013 ZFP69Q49AA0 526 aa10.12□□□□□ -0.79
RAB5C-205ENST00000550013 ZFP2Q6ZN57 461 aa10.12□□□□□ -0.79
RAB5C-205ENST00000550013 C14orf178Q8N769 122 aaPredicted RBP10.12□□□□□ -0.79
RAB5C-205ENST00000550013 SUN5Q8TC36 379 aa10.12□□□□□ -0.79
RAB5C-205ENST00000550013 MARVELD1Q9BSK0 173 aa10.12□□□□□ -0.79
RAB5C-205ENST00000550013 PKHD1L1Q86WI1 4243 aa10.12□□□□□ -0.79
RAB5C-205ENST00000550013 IGKV3D-20A0A0C4DH25 116 aa10.11□□□□□ -0.79
RAB5C-205ENST00000550013 KRTAP10-4P60372 401 aaPredicted RBP10.11□□□□□ -0.79
RAB5C-205ENST00000550013 SUMO1P63165 101 aaKnown RBP10.11□□□□□ -0.79
RAB5C-205ENST00000550013 TOR2AQ5JU69 321 aa10.11□□□□□ -0.79
RAB5C-205ENST00000550013 CYB561D1Q8N8Q1 229 aa10.11□□□□□ -0.79
RAB5C-205ENST00000550013 RAB24Q969Q5 203 aa10.11□□□□□ -0.79
RAB5C-205ENST00000550013 EPDR1Q9UM22 224 aa10.11□□□□□ -0.79
RAB5C-205ENST00000550013 RBFOX3A6NFN3 312 aa10.1□□□□□ -0.79
RAB5C-205ENST00000550013 A8MWV9 139 aa10.1□□□□□ -0.79
RAB5C-205ENST00000550013 S100A4P26447 101 aaKnown RBP10.1□□□□□ -0.79
RAB5C-205ENST00000550013 UFSP1Q6NVU6 142 aa10.1□□□□□ -0.79
RAB5C-205ENST00000550013 HSD17B11Q8NBQ5 300 aa10.1□□□□□ -0.79
RAB5C-205ENST00000550013 LINC00479Q96M42 142 aa10.1□□□□□ -0.79
RAB5C-205ENST00000550013 SH3BGRL3Q9H299 93 aa10.1□□□□□ -0.79
RAB5C-205ENST00000550013 UBR4Q5T4S7 5183 aa10.1□□□□□ -0.79
RAB5C-205ENST00000550013 IGKV2D-24A0A075B6R9 120 aa10.09□□□□□ -0.79
RAB5C-205ENST00000550013 A0A087WWC5 75 aa10.09□□□□□ -0.79
RAB5C-205ENST00000550013 TRAV34A0A0B4J273 112 aa10.09□□□□□ -0.79
RAB5C-205ENST00000550013 OR2G3Q8NGZ4 309 aa10.09□□□□□ -0.79
RAB5C-205ENST00000550013 CHAC1Q9BUX1 264 aa10.09□□□□□ -0.79
RAB5C-205ENST00000550013 COX11Q9Y6N1 276 aa10.09□□□□□ -0.79
RAB5C-205ENST00000550013 RNF222A6NCQ9 220 aa10.08□□□□□ -0.8
RAB5C-205ENST00000550013 ASIPP42127 132 aa10.08□□□□□ -0.8
RAB5C-205ENST00000550013 PIK3CD-AS1Q5SR53 167 aa10.08□□□□□ -0.8
RAB5C-205ENST00000550013 SAPCD1Q5SSQ6 148 aa10.08□□□□□ -0.8
RAB5C-205ENST00000550013 NIT1Q86X76 327 aa10.08□□□□□ -0.8
RAB5C-205ENST00000550013 Q8N976 141 aa10.08□□□□□ -0.8
RAB5C-205ENST00000550013 RMI2Q96E14 147 aa10.08□□□□□ -0.8
RAB5C-205ENST00000550013 KLK12Q9UKR0 248 aa10.08□□□□□ -0.8
RAB5C-205ENST00000550013 H3BVH4 76 aa10.07□□□□□ -0.8
RAB5C-205ENST00000550013 ATP6V0CP27449 155 aa10.07□□□□□ -0.8
RAB5C-205ENST00000550013 FGF8P55075 233 aaPredicted RBP10.07□□□□□ -0.8
RAB5C-205ENST00000550013 DMRTA1Q5VZB9 504 aa10.07□□□□□ -0.8
RAB5C-205ENST00000550013 CIRBP-AS1Q8TBR5 109 aa10.07□□□□□ -0.8
RAB5C-205ENST00000550013 URGCP-MRPS24S4R325 110 aa10.07□□□□□ -0.8
RAB5C-205ENST00000550013 ARL2-SNX15V9GYD0 113 aa10.07□□□□□ -0.8
RAB5C-205ENST00000550013 CXorf1O96002 111 aa10.06□□□□□ -0.8
RAB5C-205ENST00000550013 SERTAD4-AS1Q5TG53 156 aa10.06□□□□□ -0.8
RAB5C-205ENST00000550013 UBE2WQ96B02 151 aa10.06□□□□□ -0.8
RAB5C-205ENST00000550013 PSMG3Q9BT73 122 aaPredicted RBP10.06□□□□□ -0.8
RAB5C-205ENST00000550013 TMEM167BQ9NRX6 74 aa10.06□□□□□ -0.8
RAB5C-205ENST00000550013 IL36BQ9NZH7 164 aa10.06□□□□□ -0.8
RAB5C-205ENST00000550013 FABP5P3A8MUU1 101 aa10.05□□□□□ -0.8
RAB5C-205ENST00000550013 B4DEV8 164 aa10.05□□□□□ -0.8
RAB5C-205ENST00000550013 FAM74A4Q5TZK3 123 aa10.05□□□□□ -0.8
RAB5C-205ENST00000550013 A0A087WWL8 130 aa10.04□□□□□ -0.8
RAB5C-205ENST00000550013 GRIFINA4D1Z8 144 aa10.04□□□□□ -0.8
RAB5C-205ENST00000550013 M0R036 132 aa10.04□□□□□ -0.8
RAB5C-205ENST00000550013 RHODO00212 210 aa10.04□□□□□ -0.8
RAB5C-205ENST00000550013 ARMS2P0C7Q2 107 aa10.04□□□□□ -0.8
RAB5C-205ENST00000550013 Q86TA4 180 aa10.04□□□□□ -0.8
RAB5C-205ENST00000550013 SYT8Q8NBV8 401 aa10.04□□□□□ -0.8
RAB5C-205ENST00000550013 ACTR3CQ9C0K3 210 aaPredicted RBP10.04□□□□□ -0.8
RAB5C-205ENST00000550013 A0A087WX48 190 aa10.03□□□□□ -0.8
RAB5C-205ENST00000550013 A0A1W2PRE2 83 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms