RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 KLK9Q2XQG4 91 aa10.77□□□□□ -0.68
SRP54-202ENST00000546080 PAPPA-AS1Q5QFB9 102 aa10.77□□□□□ -0.68
SRP54-202ENST00000546080 KLK9Q9UKQ9 250 aa10.77□□□□□ -0.68
SRP54-202ENST00000546080 U3KQE9 123 aa10.77□□□□□ -0.68
SRP54-202ENST00000546080 G3V318 75 aa10.77□□□□□ -0.69
SRP54-202ENST00000546080 C1orf122Q6ZSJ8 110 aa10.77□□□□□ -0.69
SRP54-202ENST00000546080 C20orf173Q96LM9 149 aa10.77□□□□□ -0.69
SRP54-202ENST00000546080 LINC00477Q96M19 166 aa10.77□□□□□ -0.69
SRP54-202ENST00000546080 IGLV4-69A0A075B6H9 119 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 FAM90A27PA6NNH2 459 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 EMP1P54849 157 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 ZFAND2AQ8N6M9 145 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 OR10J6PQ8NGY7 276 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 ITLN2Q8WWU7 325 aaPredicted RBP10.76□□□□□ -0.69
SRP54-202ENST00000546080 BSNQ9UPA5 3926 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 IGHV1-69DA0A0B4J2H0 117 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 TGFAP01135 160 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 ZNF688P0C7X2 276 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 ANXA2RQ3ZCQ2 193 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 TP53TG1Q9Y2A0 90 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 MGAQ8IWI9 3026 aa10.76□□□□□ -0.69
SRP54-202ENST00000546080 LINC01548A6NM66 108 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 CFC1BP0CG36 223 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 CFC1P0CG37 223 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 SCGB1C2P0DMR2 95 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 MED14OSP0DP75 135 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 SBSPONQ8IVN8 264 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 PCNX1Q96RV3 2341 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 SPTBN4Q9H254 2564 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 IGHV3-30P01768 117 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 IGHV3-30-5P0DP03 117 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 GRNP28799 593 aaKnown RBP10.75□□□□□ -0.69
SRP54-202ENST00000546080 PMVKQ15126 192 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 Q6ZS46 218 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 GPHB5Q86YW7 130 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 C10orf126Q8N4M7 172 aa10.75□□□□□ -0.69
SRP54-202ENST00000546080 TSHBP01222 138 aa10.74□□□□□ -0.69
SRP54-202ENST00000546080 ANKRD29Q8N6D5 301 aa10.74□□□□□ -0.69
SRP54-202ENST00000546080 ERG28Q9UKR5 140 aa10.74□□□□□ -0.69
SRP54-202ENST00000546080 OVOL1O14753 267 aa10.73□□□□□ -0.69
SRP54-202ENST00000546080 RNASE4P34096 147 aaKnown RBP10.73□□□□□ -0.69
SRP54-202ENST00000546080 TMEM170BQ5T4T1 132 aa10.73□□□□□ -0.69
SRP54-202ENST00000546080 PRO1854Q9UHT4 67 aa10.73□□□□□ -0.69
SRP54-202ENST00000546080 TPRP12270 2363 aaKnown RBP10.73□□□□□ -0.69
SRP54-202ENST00000546080 IGIPA6NJ69 53 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 TMEM262E9PQX1 116 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 GNRH2O43555 120 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 ZFP36P26651 326 aaKnown RBP10.72□□□□□ -0.69
SRP54-202ENST00000546080 TSPEAR-AS2P59090 65 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 SLC25A29Q8N8R3 303 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 RNF183Q96D59 192 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 KIR2DL4Q99706 377 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 RNASE3P12724 160 aaKnown RBP10.72□□□□□ -0.69
SRP54-202ENST00000546080 ARL3P36405 182 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 TMEM141Q96I45 108 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 SIRPDQ9H106 197 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 SPTBN2O15020 2390 aa10.72□□□□□ -0.69
SRP54-202ENST00000546080 DEFB1P60022 68 aa10.71□□□□□ -0.69
SRP54-202ENST00000546080 RPL32P62910 135 aaKnown RBP10.71□□□□□ -0.69
SRP54-202ENST00000546080 POM121L12Q8N7R1 296 aa10.71□□□□□ -0.69
SRP54-202ENST00000546080 DEFB104AQ8WTQ1 72 aa10.71□□□□□ -0.69
SRP54-202ENST00000546080 ANAPC13Q9BS18 74 aa10.71□□□□□ -0.69
SRP54-202ENST00000546080 APC2O95996 2303 aa10.71□□□□□ -0.7
SRP54-202ENST00000546080 RPL39P62891 51 aaKnown RBP10.7□□□□□ -0.7
SRP54-202ENST00000546080 LGALS3P17931 250 aaKnown RBP10.7□□□□□ -0.7
SRP54-202ENST00000546080 ZFAND6Q6FIF0 208 aa10.7□□□□□ -0.7
SRP54-202ENST00000546080 TIMM17AQ99595 171 aa10.7□□□□□ -0.7
SRP54-202ENST00000546080 POLEQ07864 2286 aa10.7□□□□□ -0.7
SRP54-202ENST00000546080 J3QQQ9 107 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 SLC25A20O43772 301 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 SAA4P35542 130 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 UBE2E1P51965 193 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 TEX29Q8N6K0 151 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 IGHV4OR15-8A0A075B7B6 117 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 A0A087WW49 117 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 VCYO14598 125 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 NXPH4O95158 308 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
SRP54-202ENST00000546080 ZNRF2Q8NHG8 242 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 KIF25-AS1Q9Y6Z4 181 aa10.69□□□□□ -0.7
SRP54-202ENST00000546080 C9JAW5 83 aa10.68□□□□□ -0.7
SRP54-202ENST00000546080 SOCS3O14543 225 aa10.68□□□□□ -0.7
SRP54-202ENST00000546080 SUMO4Q6EEV6 95 aa10.68□□□□□ -0.7
SRP54-202ENST00000546080 C11orf71Q6IPW1 123 aa10.68□□□□□ -0.7
SRP54-202ENST00000546080 AJUBAQ96IF1 538 aa10.68□□□□□ -0.7
SRP54-202ENST00000546080 RAX2Q96IS3 184 aa10.68□□□□□ -0.7
SRP54-202ENST00000546080 FAM19A4Q96LR4 140 aa10.68□□□□□ -0.7
SRP54-202ENST00000546080 FAM223BA6NKX1 122 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 F6UB75 175 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 LINC00315P59091 139 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 RPL11P62913 178 aaKnown RBP10.67□□□□□ -0.7
SRP54-202ENST00000546080 FBXL19-AS1Q494R0 122 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 ZNF876PQ49A33 203 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 UNQ9165/PRO28630Q6UXU0 137 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 FAM223AQ8IWN6 122 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 AMELXQ99217 191 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 A4D1N5 150 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 APRG1Q8IVJ8 170 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 C5orf56Q8N8D9 126 aa10.67□□□□□ -0.7
SRP54-202ENST00000546080 TRAV41A0A0B4J266 112 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 117.4 ms