RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, human

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG1-225	ENST00000545920	ARL3	P36405	182 aa		4.89	□□□□□ -1.63
SNHG1-225	ENST00000545920	FXYD7	P58549	80 aa		4.89	□□□□□ -1.63
SNHG1-225	ENST00000545920	PMVK	Q15126	192 aa		4.89	□□□□□ -1.63
SNHG1-225	ENST00000545920	RNF182	Q8N6D2	247 aa		4.89	□□□□□ -1.63
SNHG1-225	ENST00000545920	BAALC	Q8WXS3	180 aa		4.89	□□□□□ -1.63
SNHG1-225	ENST00000545920	KIR2DL4	Q99706	377 aa		4.89	□□□□□ -1.63
SNHG1-225	ENST00000545920	PRO0461	Q9UI25	63 aa		4.89	□□□□□ -1.63
SNHG1-225	ENST00000545920	ZGRF1	Q86YA3	2104 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920		A0A0J9YX75	114 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	KLLN	B2CW77	178 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	TMEM262	E9PQX1	116 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	COX6B1	P14854	86 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	GATA1	P15976	413 aa	Predicted RBP	4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	POLR2K	P53803	58 aa	Known RBP	4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	UBE2D3	P61077	147 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	LMO4	P61968	165 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	UBE2D2	P62837	147 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	ADORA2A-AS1	P86434	159 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	PRB3	Q04118	309 aa	Predicted RBP	4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	PRR30	Q53SZ7	412 aa	Predicted RBP	4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920		Q5PR19	223 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	IGFL4	Q6B9Z1	124 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	CLEC2A	Q6UVW9	174 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	MAPKAPK5-AS1	Q8N8E1	139 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	SYT8	Q8NBV8	401 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	LINC01600	Q96MT4	127 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	PRADC1	Q9BSG0	188 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	C1QTNF4	Q9BXJ3	329 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	EDA2R	Q9HAV5	297 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	WDR87	Q6ZQQ6	2873 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	PLXNB1	O43157	2135 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	SVIL	O95425	2214 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	ICE1	Q9Y2F5	2266 aa		4.88	□□□□□ -1.63
SNHG1-225	ENST00000545920	TRBV27	A0A0K0K1C4	114 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	ZNF815P	A8K554	130 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920		F5H697	171 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920		K7ERJ3	54 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	LGALS9	O00182	355 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	GAS8-AS1	O95177	125 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	IGHG2	P01859	326 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	SRSF9	Q13242	221 aa	Known RBP eCLIP	4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	PIK3CD-AS1	Q5SR53	167 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	CFAP126	Q5VTH2	177 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	SCGB1D4	Q6XE38	83 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	NFE4	Q86UQ8	179 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	GPHB5	Q86YW7	130 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	SBSPON	Q8IVN8	264 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	PPDPFL	Q8WWR9	84 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	RNF183	Q96D59	192 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	DAZ1	Q9NQZ3	744 aa	Known RBP	4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	SPANXA1	Q9NS26	97 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	MRPL16	Q9NX20	251 aa	Known RBP	4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	KIF25-AS1	Q9Y6Z4	181 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	CACNA1H	O95180	2353 aa		4.87	□□□□□ -1.63
SNHG1-225	ENST00000545920	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	SDHAF1	A6NFY7	115 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	IGIP	A6NJ69	53 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	APOM	O95445	188 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	CD7	P09564	240 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	AZU1	P20160	251 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	FOXI1	Q12951	378 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	WFDC2	Q14508	124 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	NSUN5P1	Q3KNT7	163 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	ANXA2R	Q3ZCQ2	193 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	ZNF876P	Q49A33	203 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	MORN3	Q6PF18	240 aa	Predicted RBP	4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	FAM159A	Q6UWV7	190 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920		Q6ZSN1	163 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	TEN1	Q86WV5	123 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	SLC25A29	Q8N8R3	303 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	PLEKHB2	Q96CS7	222 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	C20orf173	Q96LM9	149 aa		4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	NAA38	Q9BRA0	125 aa	Known RBP	4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	TSSC4	Q9Y5U2	329 aa	Predicted RBP	4.86	□□□□□ -1.63
SNHG1-225	ENST00000545920	ABCA1	O95477	2261 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	TRAV26-2	A0A0B4J265	109 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920		A0A0B4J2C4	111 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920		A0A0J9YY99	117 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920		G3V318	75 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	LEPROT	O15243	131 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	DUSP14	O95147	198 aa	Known RBP	4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	MGP	P08493	103 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920		P0DMU3	169 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	FAM231A	P0DMU4	169 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	FAM231C	P0DMU5	169 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	RNASE3	P12724	160 aa	Known RBP	4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	GATA3	P23771	443 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	RNASE4	P34096	147 aa	Known RBP	4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	LINC00315	P59091	139 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	ETDB	Q3ZM63	59 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	PRR9	Q5T870	116 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	ZFP2	Q6ZN57	461 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	TRPT1	Q86TN4	253 aa	Known RBP	4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	NDUFA11	Q86Y39	141 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	C10orf126	Q8N4M7	172 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	C14orf178	Q8N769	122 aa	Predicted RBP	4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	C11orf44	Q8N8P7	122 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	PTH2	Q96A98	100 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	C9orf85	Q96MD7	179 aa		4.85	□□□□□ -1.63
SNHG1-225	ENST00000545920	SPAG8	Q99932	426 aa	Predicted RBP	4.85	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 14 ms