RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 GGTLC3B5MD39 225 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 F6UZH7 168 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 TAAR5O14804 337 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 SLAQ13239 276 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 TMEM183BQ1AE95 376 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 CFAP161Q6P656 301 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 TMEM183AQ8IXX5 376 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 CYB561D1Q8N8Q1 229 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 TMEM75Q8N9X5 138 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 RASL10AQ92737 203 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 TVP23CQ96ET8 276 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 SPXQ9BT56 116 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 TREM1Q9NP99 234 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 MDFICQ9P1T7 246 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 PRO0255Q9UI72 69 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 NAGKQ9UJ70 344 aa5.3□□□□□ -1.56
SNHG1-223ENST00000545440 A0A1W2PPQ1 181 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 A0A1W2PRE2 83 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 ARPC5O15511 151 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 PAGE4O60829 102 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 IGLV2-11P01706 119 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 TYMSP04818 313 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 CRYBA4P53673 196 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 ZNF345Q14585 488 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 ESRGQ1W209 222 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 ZFP69Q49AA0 526 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 IQCF2Q8IXL9 164 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 C6orf223Q8N319 242 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 KCNS1Q96KK3 526 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 Q9H8V8 135 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 SDF2L1Q9HCN8 221 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 ICOSQ9Y6W8 199 aa5.29□□□□□ -1.56
SNHG1-223ENST00000545440 DNAH17Q9UFH2 4485 aa5.28□□□□□ -1.56
SNHG1-223ENST00000545440 TRAV4A0A0B4J268 109 aa5.28□□□□□ -1.56
SNHG1-223ENST00000545440 IGHV3-16A0A0C4DH30 117 aa5.28□□□□□ -1.56
SNHG1-223ENST00000545440 M0R2P5 195 aa5.28□□□□□ -1.56
SNHG1-223ENST00000545440 IGHV3-53P01767 116 aa5.28□□□□□ -1.56
SNHG1-223ENST00000545440 PFN1P07737 140 aaKnown RBP5.28□□□□□ -1.56
SNHG1-223ENST00000545440 FLI1Q01543 452 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-223ENST00000545440 ZNF726P1Q15940 193 aa5.28□□□□□ -1.56
SNHG1-223ENST00000545440 AKR1C8PQ5T2L2 129 aa5.28□□□□□ -1.56
SNHG1-223ENST00000545440 NKX6-2Q9C056 277 aaPredicted RBP5.28□□□□□ -1.56
SNHG1-223ENST00000545440 EPDR1Q9UM22 224 aa5.28□□□□□ -1.56
SNHG1-223ENST00000545440 PSG8Q9UQ74 426 aa5.28□□□□□ -1.56
SNHG1-223ENST00000545440 HHLA3Q9XRX5 114 aa5.28□□□□□ -1.56
SNHG1-223ENST00000545440 TRGV4A0A0C4DH28 118 aa5.27□□□□□ -1.57
SNHG1-223ENST00000545440 GCGP01275 180 aa5.27□□□□□ -1.57
SNHG1-223ENST00000545440 PPT1P50897 306 aa5.27□□□□□ -1.57
SNHG1-223ENST00000545440 MRPL23Q16540 153 aaKnown RBP5.27□□□□□ -1.57
SNHG1-223ENST00000545440 SMUG1Q53HV7 270 aa5.27□□□□□ -1.57
SNHG1-223ENST00000545440 SAPCD1Q5SSQ6 148 aa5.27□□□□□ -1.57
SNHG1-223ENST00000545440 PCNPQ8WW12 178 aaKnown RBP5.27□□□□□ -1.57
SNHG1-223ENST00000545440 ZNF479Q96JC4 524 aa5.27□□□□□ -1.57
SNHG1-223ENST00000545440 SGK494Q96LW2 274 aa5.27□□□□□ -1.57
SNHG1-223ENST00000545440 TCEAL7Q9BRU2 100 aa5.27□□□□□ -1.57
SNHG1-223ENST00000545440 KRTAP1-5Q9BYS1 174 aa5.27□□□□□ -1.57
SNHG1-223ENST00000545440 CYTL1Q9NRR1 136 aa5.27□□□□□ -1.57
SNHG1-223ENST00000545440 PKD1P98161 4303 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 MAP1LC3B2A6NCE7 125 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 FAM74A7A6NL05 159 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 HMSDA8MTL9 139 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 C9JCJ5 164 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 PEX7O00628 323 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 SIVA1O15304 175 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 GNRH2O43555 120 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 ORM1P02763 201 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 SFTA3P0C7M3 94 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 SRIP30626 198 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 ZNF80P51504 273 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-223ENST00000545440 NEGR1Q7Z3B1 354 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 PRNTQ86SH4 94 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 Q86TA4 180 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 KCNRGQ8N5I3 272 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 NTN5Q8WTR8 489 aaPredicted RBP5.26□□□□□ -1.57
SNHG1-223ENST00000545440 HIST1H2BAQ96A08 127 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 C9orf85Q96MD7 179 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 MAP1LC3BQ9GZQ8 125 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 ARL2-SNX15V9GYD0 113 aa5.26□□□□□ -1.57
SNHG1-223ENST00000545440 SMLR1H3BR10 107 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 K7EQD1 137 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 CIDEAO60543 219 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 NXPH4O95158 308 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 IFNA7P01567 189 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 FGF8P55075 233 aaPredicted RBP5.25□□□□□ -1.57
SNHG1-223ENST00000545440 UBE2G2P60604 165 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 NRACQ8N912 160 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 OR4C5Q8NGB2 326 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 STOML3Q8TAV4 291 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 PTH2Q96A98 100 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 TXNDC17Q9BRA2 123 aa5.25□□□□□ -1.57
SNHG1-223ENST00000545440 A0A0D9SG52 128 aa5.24□□□□□ -1.57
SNHG1-223ENST00000545440 KANTRA0A1W2PQU2 76 aa5.24□□□□□ -1.57
SNHG1-223ENST00000545440 UMAD1C9J7I0 102 aa5.24□□□□□ -1.57
SNHG1-223ENST00000545440 K7EP13 123 aa5.24□□□□□ -1.57
SNHG1-223ENST00000545440 BCL2L11O43521 198 aa5.24□□□□□ -1.57
SNHG1-223ENST00000545440 SEC11BP0C7V7 166 aa5.24□□□□□ -1.57
SNHG1-223ENST00000545440 RNASE3P12724 160 aaKnown RBP5.24□□□□□ -1.57
SNHG1-223ENST00000545440 GATA1P15976 413 aaPredicted RBP5.24□□□□□ -1.57
SNHG1-223ENST00000545440 FHITP49789 147 aa5.24□□□□□ -1.57
SNHG1-223ENST00000545440 ZNF876PQ49A33 203 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms