RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 Q8N9W7 124 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 SNHG12Q9BXW3 62 aa5.41□□□□□ -1.54
SRGAP1-206ENST00000543397 ANKRD11Q6UB99 2663 aaPredicted RBP5.4□□□□□ -1.54
SRGAP1-206ENST00000543397 MYCNOSP40205 109 aa5.4□□□□□ -1.54
SRGAP1-206ENST00000543397 TMEM256Q8N2U0 113 aa5.4□□□□□ -1.54
SRGAP1-206ENST00000543397 C8orf49Q96NF6 230 aa5.4□□□□□ -1.54
SRGAP1-206ENST00000543397 SLC25A2Q9BXI2 301 aa5.4□□□□□ -1.54
SRGAP1-206ENST00000543397 PCDH15Q96QU1 1955 aa5.4□□□□□ -1.54
SRGAP1-206ENST00000543397 COL4A3Q01955 1670 aa5.4□□□□□ -1.54
SRGAP1-206ENST00000543397 E9PLD3 99 aa5.4□□□□□ -1.54
SRGAP1-206ENST00000543397 GFRA4Q9GZZ7 299 aa5.4□□□□□ -1.54
SRGAP1-206ENST00000543397 SMKR1H3BMG3 65 aa5.4□□□□□ -1.55
SRGAP1-206ENST00000543397 C20orf144Q9BQM9 153 aa5.4□□□□□ -1.55
SRGAP1-206ENST00000543397 ZNF492Q9P255 531 aa5.4□□□□□ -1.55
SRGAP1-206ENST00000543397 EML6Q6ZMW3 1958 aa5.4□□□□□ -1.55
SRGAP1-206ENST00000543397 PRIMA1Q86XR5 153 aa5.4□□□□□ -1.55
SRGAP1-206ENST00000543397 PYGO2Q9BRQ0 406 aa5.4□□□□□ -1.55
SRGAP1-206ENST00000543397 TMEM243Q9BU79 118 aa5.4□□□□□ -1.55
SRGAP1-206ENST00000543397 DNAJC9-AS1A6NH13 148 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 IL15RAQ13261 267 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 Q8N7P7 452 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 PLXNB3Q9ULL4 1909 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 TEX48A0A1B0GUV7 120 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 IGLV1-47P01700 117 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 CGB7P0DN87 165 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 BCL6BQ8N143 479 aaPredicted RBP5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 TLN2Q9Y4G6 2542 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 A0A096LPF7 62 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 MSMPQ1L6U9 139 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 APRG1Q8IVJ8 170 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 SPANXDQ9BXN6 97 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 TRBV20-1A0A075B6N2 111 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 LMO4P61968 165 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 NOP10Q9NPE3 64 aaKnown RBP5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 ERG28Q9UKR5 140 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 SMAD5-AS1Q9Y6J3 95 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 LRRK2Q5S007 2527 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 INAFM1C9JVW0 142 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 RHOHQ15669 191 aa5.39□□□□□ -1.55
SRGAP1-206ENST00000543397 IGHV4OR15-8A0A075B7B6 117 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 A0A087WW49 117 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 KIR2DL5BA0A0G2JN68 375 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 KIR2DL5BA0A0G2JPC4 375 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 A0A0J9YY99 117 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 SDHAF1A6NFY7 115 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 GGTLC3B5MD39 225 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 I3L3M4 83 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 IGHG2P01859 326 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 SPART-AS1P0CW21 52 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 Q6ZSR3 168 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 KIR2DL5AQ8N109 375 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 KIR2DL5BQ8NHK3 375 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 IGLV11-55A0A075B6I3 123 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 TNFRSF13BO14836 293 aaPredicted RBP5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST1H2BKO60814 126 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST1H2BJP06899 126 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST1H2BOP23527 126 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST1H2BBP33778 126 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST1H2BDP58876 126 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST1H2BCP62807 126 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST2H2BEQ16778 126 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST1H2BHQ93079 126 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST1H2BNQ99877 126 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 HIST1H2BMQ99879 126 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 MYMXA0A1B0GTQ4 84 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 ANGP03950 147 aaKnown RBP5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 DLX4Q92988 240 aaPredicted RBP5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 TIMM21Q9BVV7 248 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 NHP2Q9NX24 153 aaKnown RBP5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 NCKAP5O14513 1909 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 SMIM26A0A096LP01 95 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 IGHV3-38A0A0C4DH36 116 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 M0R2P5 195 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 CD5LO43866 347 aa5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 NCOA6Q14686 2063 aaPredicted RBP5.38□□□□□ -1.55
SRGAP1-206ENST00000543397 INSL3P51460 131 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 SAMD5Q5TGI4 173 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 ZNF493Q6ZR52 646 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 PRRC2AP48634 2157 aaKnown RBP5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 SFTA2Q6UW10 78 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 A8MWP6 167 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 F8WEM9 126 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 IGLV2-23P01705 113 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 IGHV4-31P0DP07 118 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 FGF6P10767 208 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 CCL18P55774 89 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 NPC2P61916 151 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 FAM19A5Q7Z5A7 132 aaPredicted RBP5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 TP53TG1Q9Y2A0 90 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 TMEM131Q92545 1883 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 K7EIM0 57 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 PRR20EP86478 221 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 PRR20CP86479 221 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 PRR20DP86480 221 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 PRR20BP86481 221 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 PRR20AP86496 221 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 LINC01561Q8N1V8 128 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 FXYD5Q96DB9 178 aa5.37□□□□□ -1.55
SRGAP1-206ENST00000543397 LENEPQ9Y5L5 61 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms