RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 SPANXN5Q5MJ07 72 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 PRR9Q5T870 116 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 FAAP20Q6NZ36 180 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 KRTAP26-1Q6PEX3 210 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 FP248Q71RG6 208 aaPredicted RBP1.84□□□□□ -2.11
CHD4-209ENST00000542717 ZFAND2AQ8N6M9 145 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 RAB2BQ8WUD1 216 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 SCGB3A2Q96PL1 93 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 PRRT1Q99946 306 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 AGPAT4-IT1Q9H0P7 198 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 PRELID1Q9Y255 219 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 UBE2D4Q9Y2X8 147 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 STRAPQ9Y3F4 350 aaKnown RBP1.84□□□□□ -2.11
CHD4-209ENST00000542717 TRBV19A0A075B6N1 114 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 TRAV8-4A0A0B4J246 113 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 TRBV7-9A0A0J9YWB2 115 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 FAM25AB3EWG3 89 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 FAM25CB3EWG5 89 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 FAM25GB3EWG6 89 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 FNDC10F2Z333 226 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 CTDSPLO15194 276 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 GNRH2O43555 120 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 SYNGR2O43760 224 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 COX7A2P2O60397 106 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 P01737 135 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 AKAIN1P0CW23 69 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 LINC00694P0DN24 101 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 HIST1H1EP10412 219 aaKnown RBP1.83□□□□□ -2.12
CHD4-209ENST00000542717 SLC25A6P12236 298 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 ANXA3P12429 323 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 LGALS3P17931 250 aaKnown RBP1.83□□□□□ -2.12
CHD4-209ENST00000542717 PTTG1IPP53801 180 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 RRAS2P62070 204 aaPredicted RBP1.83□□□□□ -2.12
CHD4-209ENST00000542717 UBE2BP63146 152 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 SSBP1Q04837 148 aaKnown RBP1.83□□□□□ -2.12
CHD4-209ENST00000542717 REG3AQ06141 175 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 SLC38A11Q08AI6 406 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 NEDD8Q15843 81 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 PCOTHQ58A44 107 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 C9orf116Q5BN46 136 aaPredicted RBP1.83□□□□□ -2.12
CHD4-209ENST00000542717 C10orf113Q5VZT2 155 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 Q6Q795 121 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 IZUMO2Q6UXV1 221 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 C15orf40Q8WUR7 153 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 CARD19Q96LW7 228 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 VCX3BQ9H321 246 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 NPVFQ9HCQ7 196 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 ZNF492Q9P255 531 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 MGAT4CQ9UBM8 478 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 RAB26Q9ULW5 256 aa1.83□□□□□ -2.12
CHD4-209ENST00000542717 TRAV6A0A075B6T7 132 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 IGKV2-40A0A087WW87 121 aaPredicted RBP1.82□□□□□ -2.12
CHD4-209ENST00000542717 FAM24AA6NFZ4 105 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 DIRC3C9JPN6 131 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 GOSR2O14653 212 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 AGPAT2O15120 278 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 NDUFB4O95168 129 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 PTTG1O95997 202 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 IGKV2D-40P01614 121 aaPredicted RBP1.82□□□□□ -2.12
CHD4-209ENST00000542717 LSM3P62310 102 aaKnown RBP1.82□□□□□ -2.12
CHD4-209ENST00000542717 RBX1P62877 108 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 MRPS10P82664 201 aaKnown RBP1.82□□□□□ -2.12
CHD4-209ENST00000542717 GAGE6Q13070 117 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 PDE6HQ13956 83 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 ZNF266Q14584 549 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 Q6AWC8 147 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 MZT2AQ6P582 158 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 TMEM14EPQ6UXP3 125 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 Q6ZRG5 221 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 CLVS1Q8IUQ0 354 aaPredicted RBP1.82□□□□□ -2.12
CHD4-209ENST00000542717 EXOC3-AS1Q8N2X6 119 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 C14orf178Q8N769 122 aaPredicted RBP1.82□□□□□ -2.12
CHD4-209ENST00000542717 DAND5Q8N907 189 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 C15orf56Q8N910 161 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 SREK1IP1Q8N9Q2 155 aaPredicted RBP1.82□□□□□ -2.12
CHD4-209ENST00000542717 OR10G7Q8NGN6 311 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 OR1L4Q8NGR5 311 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 AP3S1Q92572 193 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 MGST2Q99735 147 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 GGACTQ9BVM4 153 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 AAMDCQ9H7C9 122 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 PRR34Q9NV39 138 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 PSENENQ9NZ42 101 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 CCDC59Q9P031 241 aaKnown RBP1.82□□□□□ -2.12
CHD4-209ENST00000542717 TMEM14CQ9P0S9 112 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 EXTL2Q9UBQ6 330 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 SCP2D1Q9UJQ7 156 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 RABL2BQ9UNT1 228 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 PHLDA3Q9Y5J5 127 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 TIMM9Q9Y5J7 89 aa1.82□□□□□ -2.12
CHD4-209ENST00000542717 IGKV2D-26A0A0A0MRZ7 120 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 TRBV6-8A0A0A6YYG3 113 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 IGKV3OR2-268A0A0C4DH90 116 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 LOC107984640A0A0U1RRK4 108 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 ANKRD20A5PA0PJZ0 165 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 GAGE12HA6NDE8 117 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 F5H697 171 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 SSSCA1O60232 199 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 TYMSP04818 313 aa1.81□□□□□ -2.12
CHD4-209ENST00000542717 METTL15P1P0C7V9 234 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms